RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 KRT13P13646 458 aa10.5□□□□□ -0.73
HDAC6-207ENST00000430858 GJA1P17302 382 aa10.5□□□□□ -0.73
HDAC6-207ENST00000430858 LMO2P25791 158 aa10.5□□□□□ -0.73
HDAC6-207ENST00000430858 CDC25CP30307 473 aa10.5□□□□□ -0.73
HDAC6-207ENST00000430858 GNL1P36915 607 aaPredicted RBP10.5□□□□□ -0.73
HDAC6-207ENST00000430858 PPP1R2P41236 205 aa10.5□□□□□ -0.73
HDAC6-207ENST00000430858 PRCPP42785 496 aa10.5□□□□□ -0.73
HDAC6-207ENST00000430858 CDR1P51861 262 aa10.5□□□□□ -0.73
HDAC6-207ENST00000430858 RPL10AP62906 217 aaKnown RBP10.5□□□□□ -0.73
HDAC6-207ENST00000430858 TEAD2Q15562 447 aa10.5□□□□□ -0.73
HDAC6-207ENST00000430858 TAF12Q16514 161 aa10.5□□□□□ -0.73
HDAC6-207ENST00000430858 ZNF699Q32M78 642 aa10.5□□□□□ -0.73
HDAC6-207ENST00000430858 ZNF667Q5HYK9 610 aa10.5□□□□□ -0.73
HDAC6-207ENST00000430858 POTEHQ6S545 545 aa10.5□□□□□ -0.73
HDAC6-207ENST00000430858 C4orf50Q6ZRC1 276 aa10.5□□□□□ -0.73
HDAC6-207ENST00000430858 SV2AQ7L0J3 742 aa10.5□□□□□ -0.73
HDAC6-207ENST00000430858 SPATA2LQ8IUW3 424 aaPredicted RBP10.5□□□□□ -0.73
HDAC6-207ENST00000430858 FAM186BQ8IYM0 893 aa10.5□□□□□ -0.73
HDAC6-207ENST00000430858 SIX5Q8N196 739 aa10.5□□□□□ -0.73
HDAC6-207ENST00000430858 ST13P5Q8NFI4 369 aaPredicted RBP10.5□□□□□ -0.73
HDAC6-207ENST00000430858 OR6B3Q8NGW1 331 aa10.5□□□□□ -0.73
HDAC6-207ENST00000430858 SHKBP1Q8TBC3 707 aa10.5□□□□□ -0.73
HDAC6-207ENST00000430858 GPR152Q8TDT2 470 aa10.5□□□□□ -0.73
HDAC6-207ENST00000430858 SMARCD2Q92925 531 aa10.5□□□□□ -0.73
HDAC6-207ENST00000430858 ELSPBP1Q96BH3 223 aa10.5□□□□□ -0.73
HDAC6-207ENST00000430858 ASB16Q96NS5 453 aa10.5□□□□□ -0.73
HDAC6-207ENST00000430858 GCNAQ96QF7 691 aa10.5□□□□□ -0.73
HDAC6-207ENST00000430858 PRRX2Q99811 253 aa10.5□□□□□ -0.73
HDAC6-207ENST00000430858 TSG101Q99816 390 aa10.5□□□□□ -0.73
HDAC6-207ENST00000430858 KXD1Q9BQD3 176 aa10.5□□□□□ -0.73
HDAC6-207ENST00000430858 PI4K2AQ9BTU6 479 aa10.5□□□□□ -0.73
HDAC6-207ENST00000430858 ZFP14Q9HCL3 533 aa10.5□□□□□ -0.73
HDAC6-207ENST00000430858 NXF1Q9UBU9 619 aaKnown RBP10.5□□□□□ -0.73
HDAC6-207ENST00000430858 RAPGEFL1Q9UHV5 662 aa10.5□□□□□ -0.73
HDAC6-207ENST00000430858 NRG2O14511 850 aaPredicted RBP10.49□□□□□ -0.73
HDAC6-207ENST00000430858 CETN3O15182 167 aa10.49□□□□□ -0.73
HDAC6-207ENST00000430858 HCRTO43612 131 aa10.49□□□□□ -0.73
HDAC6-207ENST00000430858 CLSTN1O94985 981 aa10.49□□□□□ -0.73
HDAC6-207ENST00000430858 VNN1O95497 513 aa10.49□□□□□ -0.73
HDAC6-207ENST00000430858 PDGFBP01127 241 aaPredicted RBP10.49□□□□□ -0.73
HDAC6-207ENST00000430858 PDGFRBP09619 1106 aa10.49□□□□□ -0.73
HDAC6-207ENST00000430858 CSH1P0DML2 217 aa10.49□□□□□ -0.73
HDAC6-207ENST00000430858 CSH2P0DML3 217 aa10.49□□□□□ -0.73
HDAC6-207ENST00000430858 EPB41P11171 864 aaKnown RBP10.49□□□□□ -0.73
HDAC6-207ENST00000430858 P4HA1P13674 534 aa10.49□□□□□ -0.73
HDAC6-207ENST00000430858 CYP2F1P24903 491 aa10.49□□□□□ -0.73
HDAC6-207ENST00000430858 GABRR2P28476 465 aa10.49□□□□□ -0.73
HDAC6-207ENST00000430858 AVPR2P30518 371 aa10.49□□□□□ -0.73
HDAC6-207ENST00000430858 GTF2H1P32780 548 aa10.49□□□□□ -0.73
HDAC6-207ENST00000430858 MAGEA11P43364 429 aa10.49□□□□□ -0.73
HDAC6-207ENST00000430858 CLCN5P51795 746 aa10.49□□□□□ -0.73
HDAC6-207ENST00000430858 NUBP1P53384 320 aa10.49□□□□□ -0.73
HDAC6-207ENST00000430858 MCCD1P59942 119 aaPredicted RBP10.49□□□□□ -0.73
HDAC6-207ENST00000430858 PSMC1P62191 440 aaKnown RBP10.49□□□□□ -0.73
HDAC6-207ENST00000430858 UBE2HP62256 183 aa10.49□□□□□ -0.73
HDAC6-207ENST00000430858 GPC5P78333 572 aa10.49□□□□□ -0.73
HDAC6-207ENST00000430858 FKBP3Q00688 224 aaKnown RBP10.49□□□□□ -0.73
HDAC6-207ENST00000430858 PFKPQ01813 784 aa10.49□□□□□ -0.73
HDAC6-207ENST00000430858 STIM1Q13586 685 aa10.49□□□□□ -0.73
HDAC6-207ENST00000430858 SGSM1Q2NKQ1 1148 aa10.49□□□□□ -0.73
HDAC6-207ENST00000430858 ARHGAP15Q53QZ3 475 aa10.49□□□□□ -0.73
HDAC6-207ENST00000430858 FAM78AQ5JUQ0 283 aa10.49□□□□□ -0.73
HDAC6-207ENST00000430858 C1orf220Q5T0J3 134 aa10.49□□□□□ -0.73
HDAC6-207ENST00000430858 TANGO2Q6ICL3 276 aa10.49□□□□□ -0.73
HDAC6-207ENST00000430858 VSTM1Q6UX27 236 aa10.49□□□□□ -0.73
HDAC6-207ENST00000430858 GAREM2Q75VX8 874 aa10.49□□□□□ -0.73
HDAC6-207ENST00000430858 ADSSL1Q8N142 457 aa10.49□□□□□ -0.73
HDAC6-207ENST00000430858 ZSCAN18Q8TBC5 510 aaPredicted RBP10.49□□□□□ -0.73
HDAC6-207ENST00000430858 GIPC2Q8TF65 315 aa10.49□□□□□ -0.73
HDAC6-207ENST00000430858 TAF4BQ92750 862 aa10.49□□□□□ -0.73
HDAC6-207ENST00000430858 ERCC4Q92889 916 aaPredicted RBP10.49□□□□□ -0.73
HDAC6-207ENST00000430858 E2F7Q96AV8 911 aa10.49□□□□□ -0.73
HDAC6-207ENST00000430858 CEP295NLQ96MC4 621 aa10.49□□□□□ -0.73
HDAC6-207ENST00000430858 MRPL45Q9BRJ2 306 aaKnown RBP10.49□□□□□ -0.73
HDAC6-207ENST00000430858 ATXN3LQ9H3M9 355 aa10.49□□□□□ -0.73
HDAC6-207ENST00000430858 SLITRK6Q9H5Y7 841 aa10.49□□□□□ -0.73
HDAC6-207ENST00000430858 TRPV4Q9HBA0 871 aa10.49□□□□□ -0.73
HDAC6-207ENST00000430858 ZNF334Q9HCZ1 680 aaPredicted RBP10.49□□□□□ -0.73
HDAC6-207ENST00000430858 MAGEC2Q9UBF1 373 aaPredicted RBP10.49□□□□□ -0.73
HDAC6-207ENST00000430858 ZMYM5Q9UJ78 669 aa10.49□□□□□ -0.73
HDAC6-207ENST00000430858 DOCK6Q96HP0 2047 aa10.49□□□□□ -0.73
HDAC6-207ENST00000430858 NOTCH4Q99466 2003 aa10.49□□□□□ -0.73
HDAC6-207ENST00000430858 KRBA1A5PL33 1030 aa10.48□□□□□ -0.73
HDAC6-207ENST00000430858 A8MXQ7 604 aa10.48□□□□□ -0.73
HDAC6-207ENST00000430858 PSMA7O14818 248 aa10.48□□□□□ -0.73
HDAC6-207ENST00000430858 ATP2C2O75185 946 aa10.48□□□□□ -0.73
HDAC6-207ENST00000430858 ASS1P00966 412 aaKnown RBP10.48□□□□□ -0.73
HDAC6-207ENST00000430858 TRIM49P0CI25 452 aa10.48□□□□□ -0.73
HDAC6-207ENST00000430858 TRIM49CP0CI26 452 aa10.48□□□□□ -0.73
HDAC6-207ENST00000430858 HMGA1P17096 107 aaKnown RBP10.48□□□□□ -0.73
HDAC6-207ENST00000430858 NPR3P17342 541 aa10.48□□□□□ -0.73
HDAC6-207ENST00000430858 FCARP24071 287 aa10.48□□□□□ -0.73
HDAC6-207ENST00000430858 PIK3CAP42336 1068 aa10.48□□□□□ -0.73
HDAC6-207ENST00000430858 GPR15P49685 360 aa10.48□□□□□ -0.73
HDAC6-207ENST00000430858 VCPP55072 806 aaKnown RBP10.48□□□□□ -0.73
HDAC6-207ENST00000430858 LRRC63Q05C16 580 aa10.48□□□□□ -0.73
HDAC6-207ENST00000430858 DDR2Q16832 855 aa10.48□□□□□ -0.73
HDAC6-207ENST00000430858 ANKRD40Q6AI12 368 aa10.48□□□□□ -0.73
HDAC6-207ENST00000430858 ASTLQ6HA08 431 aaPredicted RBP10.48□□□□□ -0.73
HDAC6-207ENST00000430858 ZC3H3Q8IXZ2 948 aaKnown RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms