RNA–Protein interactions for RNA: ENST00000429544.6

MBD4-203, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD4, Length 2,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-203ENST00000429544 CHKAP35790 457 aa17.13■□□□□ 0.33
MBD4-203ENST00000429544 ADCY8P40145 1251 aa17.13■□□□□ 0.33
MBD4-203ENST00000429544 PRAMEF19Q5SWL8 479 aa17.13■□□□□ 0.33
MBD4-203ENST00000429544 SMYD5Q6GMV2 418 aa17.13■□□□□ 0.33
MBD4-203ENST00000429544 RHBDF2Q6PJF5 856 aa17.13■□□□□ 0.33
MBD4-203ENST00000429544 ZNF365Q70YC5 407 aa17.13■□□□□ 0.33
MBD4-203ENST00000429544 DPH6Q7L8W6 267 aa17.13■□□□□ 0.33
MBD4-203ENST00000429544 NIPA2Q8N8Q9 360 aa17.13■□□□□ 0.33
MBD4-203ENST00000429544 KIF12Q96FN5 646 aa17.13■□□□□ 0.33
MBD4-203ENST00000429544 AAASQ9NRG9 546 aa17.13■□□□□ 0.33
MBD4-203ENST00000429544 ITGA11Q9UKX5 1188 aa17.13■□□□□ 0.33
MBD4-203ENST00000429544 RALGAPA2Q2PPJ7 1873 aa17.13■□□□□ 0.33
MBD4-203ENST00000429544 M0QYV0 167 aa17.13■□□□□ 0.33
MBD4-203ENST00000429544 ITGBL1O95965 494 aaPredicted RBP17.13■□□□□ 0.33
MBD4-203ENST00000429544 KRT3P12035 628 aa17.13■□□□□ 0.33
MBD4-203ENST00000429544 PPP2R2AP63151 447 aa17.13■□□□□ 0.33
MBD4-203ENST00000429544 RAPGEF5Q92565 580 aa17.13■□□□□ 0.33
MBD4-203ENST00000429544 TLCD1Q96CP7 247 aa17.13■□□□□ 0.33
MBD4-203ENST00000429544 METTL5Q9NRN9 209 aaKnown RBP17.13■□□□□ 0.33
MBD4-203ENST00000429544 DNAJC17Q9NVM6 304 aaKnown RBP17.13■□□□□ 0.33
MBD4-203ENST00000429544 NEU2Q9Y3R4 380 aa17.13■□□□□ 0.33
MBD4-203ENST00000429544 C2CD2Q9Y426 696 aa17.13■□□□□ 0.33
MBD4-203ENST00000429544 ZNF236Q9UL36 1845 aa17.13■□□□□ 0.33
MBD4-203ENST00000429544 LRRD1A4D1F6 860 aa17.12■□□□□ 0.33
MBD4-203ENST00000429544 SLC15A5A6NIM6 579 aa17.12■□□□□ 0.33
MBD4-203ENST00000429544 SIGLEC16A6NMB1 481 aa17.12■□□□□ 0.33
MBD4-203ENST00000429544 DYNC1LI2O43237 492 aaPredicted RBP17.12■□□□□ 0.33
MBD4-203ENST00000429544 GRM5P41594 1212 aa17.12■□□□□ 0.33
MBD4-203ENST00000429544 CCT5P48643 541 aa17.12■□□□□ 0.33
MBD4-203ENST00000429544 RBP5P82980 135 aa17.12■□□□□ 0.33
MBD4-203ENST00000429544 PRUNE1Q86TP1 453 aa17.12■□□□□ 0.33
MBD4-203ENST00000429544 XYLT1Q86Y38 959 aa17.12■□□□□ 0.33
MBD4-203ENST00000429544 HEXIM2Q96MH2 286 aaKnown RBP17.12■□□□□ 0.33
MBD4-203ENST00000429544 CPA4Q9UI42 421 aa17.12■□□□□ 0.33
MBD4-203ENST00000429544 ANAPC5Q9UJX4 755 aa17.12■□□□□ 0.33
MBD4-203ENST00000429544 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.12■□□□□ 0.33
MBD4-203ENST00000429544 PTGISQ16647 500 aa17.12■□□□□ 0.33
MBD4-203ENST00000429544 GSTA5Q7RTV2 222 aa17.12■□□□□ 0.33
MBD4-203ENST00000429544 DDX23Q9BUQ8 820 aaKnown RBP17.12■□□□□ 0.33
MBD4-203ENST00000429544 CXCL16Q9H2A7 254 aa17.12■□□□□ 0.33
MBD4-203ENST00000429544 CDC42EP4Q9H3Q1 356 aaKnown RBP17.12■□□□□ 0.33
MBD4-203ENST00000429544 DDX56Q9NY93 547 aaKnown RBP17.12■□□□□ 0.33
MBD4-203ENST00000429544 SLC12A6Q9UHW9 1150 aa17.12■□□□□ 0.33
MBD4-203ENST00000429544 SCN1AP35498 2009 aa17.12■□□□□ 0.33
MBD4-203ENST00000429544 LIASO43766 372 aa17.11■□□□□ 0.33
MBD4-203ENST00000429544 TJP3O95049 919 aa17.11■□□□□ 0.33
MBD4-203ENST00000429544 NDST1P52848 882 aa17.11■□□□□ 0.33
MBD4-203ENST00000429544 DCAF4L1Q3SXM0 396 aa17.11■□□□□ 0.33
MBD4-203ENST00000429544 EMC1Q8N766 993 aa17.11■□□□□ 0.33
MBD4-203ENST00000429544 EPS8L3Q8TE67 593 aaKnown RBP17.11■□□□□ 0.33
MBD4-203ENST00000429544 LENG1Q96BZ8 264 aaPredicted RBP17.11■□□□□ 0.33
MBD4-203ENST00000429544 HAUS1Q96CS2 278 aa17.11■□□□□ 0.33
MBD4-203ENST00000429544 ADAMTS10Q9H324 1103 aa17.11■□□□□ 0.33
MBD4-203ENST00000429544 ZWILCHQ9H900 591 aa17.11■□□□□ 0.33
MBD4-203ENST00000429544 DNPEPQ9ULA0 475 aa17.11■□□□□ 0.33
MBD4-203ENST00000429544 hCG_1818297A0A087WSY0 165 aa17.11■□□□□ 0.33
MBD4-203ENST00000429544 RRN3P2A6NIE6 340 aa17.11■□□□□ 0.33
MBD4-203ENST00000429544 SMIM10L2AP0DMW4 78 aa17.11■□□□□ 0.33
MBD4-203ENST00000429544 SMIM10L2BP0DMW5 78 aa17.11■□□□□ 0.33
MBD4-203ENST00000429544 VDRP11473 427 aa17.11■□□□□ 0.33
MBD4-203ENST00000429544 TRMT10CQ7L0Y3 403 aaKnown RBP17.11■□□□□ 0.33
MBD4-203ENST00000429544 CATSPER4Q7RTX7 472 aa17.11■□□□□ 0.33
MBD4-203ENST00000429544 UBA3Q8TBC4 463 aa17.11■□□□□ 0.33
MBD4-203ENST00000429544 TRAIPQ9BWF2 469 aa17.11■□□□□ 0.33
MBD4-203ENST00000429544 CDHR5Q9HBB8 845 aa17.11■□□□□ 0.33
MBD4-203ENST00000429544 SNTG2Q9NY99 539 aa17.11■□□□□ 0.33
MBD4-203ENST00000429544 BARX2Q9UMQ3 279 aaPredicted RBP17.11■□□□□ 0.33
MBD4-203ENST00000429544 COPS2P61201 443 aa17.1■□□□□ 0.33
MBD4-203ENST00000429544 SMTNL2Q2TAL5 461 aa17.1■□□□□ 0.33
MBD4-203ENST00000429544 IZUMO3Q5VZ72 239 aa17.1■□□□□ 0.33
MBD4-203ENST00000429544 PWWP2AQ96N64 755 aa17.1■□□□□ 0.33
MBD4-203ENST00000429544 EPN3Q9H201 632 aa17.1■□□□□ 0.33
MBD4-203ENST00000429544 WDR35Q9P2L0 1181 aa17.1■□□□□ 0.33
MBD4-203ENST00000429544 NDUFAB1O14561 156 aa17.1■□□□□ 0.33
MBD4-203ENST00000429544 RGS16O15492 202 aaPredicted RBP17.1■□□□□ 0.33
MBD4-203ENST00000429544 LRCH4O75427 683 aa17.1■□□□□ 0.33
MBD4-203ENST00000429544 ACSL3O95573 720 aa17.1■□□□□ 0.33
MBD4-203ENST00000429544 CYP3A5P20815 502 aa17.1■□□□□ 0.33
MBD4-203ENST00000429544 HOXA11P31270 313 aaPredicted RBP17.1■□□□□ 0.33
MBD4-203ENST00000429544 CDKN2BP42772 138 aa17.1■□□□□ 0.33
MBD4-203ENST00000429544 SLCO1A2P46721 670 aa17.1■□□□□ 0.33
MBD4-203ENST00000429544 IRX5P78411 483 aaPredicted RBP17.1■□□□□ 0.33
MBD4-203ENST00000429544 SLC25A11Q02978 314 aaKnown RBP17.1■□□□□ 0.33
MBD4-203ENST00000429544 CAV1Q03135 178 aa17.1■□□□□ 0.33
MBD4-203ENST00000429544 INCA1Q0VD86 236 aa17.1■□□□□ 0.33
MBD4-203ENST00000429544 ZNF268Q14587 947 aaPredicted RBP17.1■□□□□ 0.33
MBD4-203ENST00000429544 CNGA2Q16280 664 aa17.1■□□□□ 0.33
MBD4-203ENST00000429544 TFDP3Q5H9I0 405 aa17.1■□□□□ 0.33
MBD4-203ENST00000429544 NT5DC4Q86YG4 428 aa17.1■□□□□ 0.33
MBD4-203ENST00000429544 ARFGAP1Q8N6T3 406 aa17.1■□□□□ 0.33
MBD4-203ENST00000429544 CCDC89Q8N998 374 aa17.1■□□□□ 0.33
MBD4-203ENST00000429544 OSMRQ99650 979 aa17.1■□□□□ 0.33
MBD4-203ENST00000429544 EIF2AQ9BY44 585 aaKnown RBP17.1■□□□□ 0.33
MBD4-203ENST00000429544 GCOM2Q9BZD3 368 aaPredicted RBP17.1■□□□□ 0.33
MBD4-203ENST00000429544 SLC5A4Q9NY91 659 aa17.1■□□□□ 0.33
MBD4-203ENST00000429544 KLRC2P26717 231 aa17.09■□□□□ 0.33
MBD4-203ENST00000429544 IL1R2P27930 398 aa17.09■□□□□ 0.33
MBD4-203ENST00000429544 PTPN7P35236 360 aa17.09■□□□□ 0.33
MBD4-203ENST00000429544 GPD2P43304 727 aa17.09■□□□□ 0.33
MBD4-203ENST00000429544 GSCP56915 257 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms