RNA–Protein interactions for RNA: ENST00000428634.1

PEX11B-202, Transcript of peroxisomal biogenesis factor 11 beta, humanhuman

TSL 2

Gene PEX11B, Length 667 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX11B-202ENST00000428634 PSMC1P62191 440 aaKnown RBP12.85□□□□□ -0.35
PEX11B-202ENST00000428634 CDR2Q01850 454 aa12.85□□□□□ -0.35
PEX11B-202ENST00000428634 CNGA2Q16280 664 aa12.85□□□□□ -0.35
PEX11B-202ENST00000428634 NFE2Q16621 373 aaPredicted RBP12.85□□□□□ -0.35
PEX11B-202ENST00000428634 LRIT3Q3SXY7 679 aa12.85□□□□□ -0.35
PEX11B-202ENST00000428634 MDH1BQ5I0G3 518 aa12.85□□□□□ -0.35
PEX11B-202ENST00000428634 KIAA0319Q5VV43 1072 aa12.85□□□□□ -0.35
PEX11B-202ENST00000428634 E4F1Q66K89 784 aaPredicted RBP12.85□□□□□ -0.35
PEX11B-202ENST00000428634 HGSNATQ68CP4 663 aa12.85□□□□□ -0.35
PEX11B-202ENST00000428634 ARHGAP17Q68EM7 881 aa12.85□□□□□ -0.35
PEX11B-202ENST00000428634 PDE12Q6L8Q7 609 aaKnown RBP12.85□□□□□ -0.35
PEX11B-202ENST00000428634 WDR59Q6PJI9 974 aa12.85□□□□□ -0.35
PEX11B-202ENST00000428634 PRSS55Q6UWB4 352 aaPredicted RBP12.85□□□□□ -0.35
PEX11B-202ENST00000428634 TRIM72Q6ZMU5 477 aa12.85□□□□□ -0.35
PEX11B-202ENST00000428634 C4orf50Q6ZRC1 276 aa12.85□□□□□ -0.35
PEX11B-202ENST00000428634 GPIHBP1Q8IV16 184 aa12.85□□□□□ -0.35
PEX11B-202ENST00000428634 MYCBPAPQ8TBZ2 947 aa12.85□□□□□ -0.35
PEX11B-202ENST00000428634 SPPL3Q8TCT6 385 aa12.85□□□□□ -0.35
PEX11B-202ENST00000428634 EPS8L1Q8TE68 723 aa12.85□□□□□ -0.35
PEX11B-202ENST00000428634 POF1BQ8WVV4 589 aa12.85□□□□□ -0.35
PEX11B-202ENST00000428634 ZNF606Q8WXB4 792 aa12.85□□□□□ -0.35
PEX11B-202ENST00000428634 CYFIP2Q96F07 1278 aa12.85□□□□□ -0.35
PEX11B-202ENST00000428634 CCDC42Q96M95 316 aa12.85□□□□□ -0.35
PEX11B-202ENST00000428634 RTP3Q9BQQ7 232 aa12.85□□□□□ -0.35
PEX11B-202ENST00000428634 MED10Q9BTT4 135 aa12.85□□□□□ -0.35
PEX11B-202ENST00000428634 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.85□□□□□ -0.35
PEX11B-202ENST00000428634 ZCWPW1Q9H0M4 648 aa12.85□□□□□ -0.35
PEX11B-202ENST00000428634 LMAN2LQ9H0V9 348 aa12.85□□□□□ -0.35
PEX11B-202ENST00000428634 ALG13Q9NP73 1137 aaKnown RBP12.85□□□□□ -0.35
PEX11B-202ENST00000428634 NGRNQ9NPE2 291 aaKnown RBP12.85□□□□□ -0.35
PEX11B-202ENST00000428634 ENTPD7Q9NQZ7 604 aa12.85□□□□□ -0.35
PEX11B-202ENST00000428634 TLR9Q9NR96 1032 aa12.85□□□□□ -0.35
PEX11B-202ENST00000428634 SEPT11Q9NVA2 429 aaKnown RBP12.85□□□□□ -0.35
PEX11B-202ENST00000428634 NME7Q9Y5B8 376 aa12.85□□□□□ -0.35
PEX11B-202ENST00000428634 HCRTO43612 131 aa12.84□□□□□ -0.35
PEX11B-202ENST00000428634 AKR1B10O60218 316 aa12.84□□□□□ -0.35
PEX11B-202ENST00000428634 EIF4A3P38919 411 aaKnown RBP12.84□□□□□ -0.35
PEX11B-202ENST00000428634 ARPP19P56211 112 aa12.84□□□□□ -0.35
PEX11B-202ENST00000428634 SLC8A3P57103 927 aa12.84□□□□□ -0.35
PEX11B-202ENST00000428634 SMC1AQ14683 1233 aaKnown RBP12.84□□□□□ -0.35
PEX11B-202ENST00000428634 TAF3Q5VWG9 929 aa12.84□□□□□ -0.35
PEX11B-202ENST00000428634 SLC8B1Q6J4K2 584 aa12.84□□□□□ -0.35
PEX11B-202ENST00000428634 PPP1R2P3Q6NXS1 205 aa12.84□□□□□ -0.35
PEX11B-202ENST00000428634 FAM171BQ6P995 826 aa12.84□□□□□ -0.35
PEX11B-202ENST00000428634 ZNF571Q7Z3V5 609 aaPredicted RBP12.84□□□□□ -0.35
PEX11B-202ENST00000428634 NOP9Q86U38 636 aaKnown RBP12.84□□□□□ -0.35
PEX11B-202ENST00000428634 SPATA2LQ8IUW3 424 aaPredicted RBP12.84□□□□□ -0.35
PEX11B-202ENST00000428634 CCDC170Q8IYT3 715 aa12.84□□□□□ -0.35
PEX11B-202ENST00000428634 C12orf29Q8N999 325 aa12.84□□□□□ -0.35
PEX11B-202ENST00000428634 OR10T2Q8NGX3 314 aa12.84□□□□□ -0.35
PEX11B-202ENST00000428634 MICAL1Q8TDZ2 1067 aa12.84□□□□□ -0.35
PEX11B-202ENST00000428634 C2orf15Q8WU43 125 aaKnown RBP12.84□□□□□ -0.35
PEX11B-202ENST00000428634 TFAP2BQ92481 460 aa12.84□□□□□ -0.35
PEX11B-202ENST00000428634 HNRNPABQ99729 332 aaKnown RBP12.84□□□□□ -0.35
PEX11B-202ENST00000428634 TCF25Q9BQ70 676 aa12.84□□□□□ -0.35
PEX11B-202ENST00000428634 EMILIN2Q9BXX0 1053 aa12.84□□□□□ -0.35
PEX11B-202ENST00000428634 NHEJ1Q9H9Q4 299 aaPredicted RBP12.84□□□□□ -0.35
PEX11B-202ENST00000428634 ACP6Q9NPH0 428 aa12.84□□□□□ -0.35
PEX11B-202ENST00000428634 CRTAC1Q9NQ79 661 aa12.84□□□□□ -0.35
PEX11B-202ENST00000428634 FAM49BQ9NUQ9 324 aa12.84□□□□□ -0.35
PEX11B-202ENST00000428634 FNIP2Q9P278 1114 aa12.84□□□□□ -0.35
PEX11B-202ENST00000428634 ARHGAP20Q9P2F6 1191 aa12.84□□□□□ -0.35
PEX11B-202ENST00000428634 NOCTQ9UK39 431 aaKnown RBP12.84□□□□□ -0.35
PEX11B-202ENST00000428634 GTF3C4Q9UKN8 822 aa12.84□□□□□ -0.35
PEX11B-202ENST00000428634 PCDHGC3Q9UN70 934 aa12.84□□□□□ -0.35
PEX11B-202ENST00000428634 PDE4DIPQ5VU43 2346 aa12.84□□□□□ -0.35
PEX11B-202ENST00000428634 CEP290O15078 2479 aa12.84□□□□□ -0.35
PEX11B-202ENST00000428634 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.83□□□□□ -0.36
PEX11B-202ENST00000428634 MYBPHLA2RUH7 354 aa12.83□□□□□ -0.36
PEX11B-202ENST00000428634 O00370 1275 aa12.83□□□□□ -0.36
PEX11B-202ENST00000428634 ARHGAP6O43182 974 aa12.83□□□□□ -0.36
PEX11B-202ENST00000428634 TBC1D4O60343 1298 aa12.83□□□□□ -0.36
PEX11B-202ENST00000428634 ATP2C2O75185 946 aa12.83□□□□□ -0.36
PEX11B-202ENST00000428634 IPO7O95373 1038 aaKnown RBP12.83□□□□□ -0.36
PEX11B-202ENST00000428634 MMEP08473 750 aa12.83□□□□□ -0.36
PEX11B-202ENST00000428634 ADORA2BP29275 332 aa12.83□□□□□ -0.36
PEX11B-202ENST00000428634 CYP27A1Q02318 531 aa12.83□□□□□ -0.36
PEX11B-202ENST00000428634 C1QBPQ07021 282 aaKnown RBP12.83□□□□□ -0.36
PEX11B-202ENST00000428634 GPR17Q13304 367 aa12.83□□□□□ -0.36
PEX11B-202ENST00000428634 PTPN14Q15678 1187 aa12.83□□□□□ -0.36
PEX11B-202ENST00000428634 GOLGA7BQ2TAP0 167 aa12.83□□□□□ -0.36
PEX11B-202ENST00000428634 SLC39A12Q504Y0 691 aa12.83□□□□□ -0.36
PEX11B-202ENST00000428634 PPP1R26Q5T8A7 1209 aaPredicted RBP12.83□□□□□ -0.36
PEX11B-202ENST00000428634 PRPF38BQ5VTL8 546 aaKnown RBP12.83□□□□□ -0.36
PEX11B-202ENST00000428634 LCLAT1Q6UWP7 414 aa12.83□□□□□ -0.36
PEX11B-202ENST00000428634 SLC20A1Q8WUM9 679 aa12.83□□□□□ -0.36
PEX11B-202ENST00000428634 ARNTL2Q8WYA1 636 aa12.83□□□□□ -0.36
PEX11B-202ENST00000428634 DDX1Q92499 740 aaKnown RBP12.83□□□□□ -0.36
PEX11B-202ENST00000428634 MYLPFQ96A32 169 aa12.83□□□□□ -0.36
PEX11B-202ENST00000428634 TRIM44Q96DX7 344 aaPredicted RBP12.83□□□□□ -0.36
PEX11B-202ENST00000428634 PCED1BQ96HM7 432 aa12.83□□□□□ -0.36
PEX11B-202ENST00000428634 FUBP3Q96I24 572 aaKnown RBP eCLIP12.83□□□□□ -0.36
PEX11B-202ENST00000428634 TMEM209Q96SK2 561 aa12.83□□□□□ -0.36
PEX11B-202ENST00000428634 CHP1Q99653 195 aa12.83□□□□□ -0.36
PEX11B-202ENST00000428634 RXFP1Q9HBX9 757 aa12.83□□□□□ -0.36
PEX11B-202ENST00000428634 TSPAN16Q9UKR8 245 aa12.83□□□□□ -0.36
PEX11B-202ENST00000428634 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.83□□□□□ -0.36
PEX11B-202ENST00000428634 COLQQ9Y215 455 aaPredicted RBP12.83□□□□□ -0.36
PEX11B-202ENST00000428634 PCDHB5Q9Y5E4 795 aa12.83□□□□□ -0.36
PEX11B-202ENST00000428634 IRAK3Q9Y616 596 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms