RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 TCP10L2B9ZVM9 353 aa11.29□□□□□ -0.6
ATP2C1-204ENST00000428331 ZBED4O75132 1171 aa11.29□□□□□ -0.6
ATP2C1-204ENST00000428331 FDX1P10109 184 aa11.29□□□□□ -0.6
ATP2C1-204ENST00000428331 ETS1P14921 441 aa11.29□□□□□ -0.6
ATP2C1-204ENST00000428331 PSMA2P25787 234 aa11.29□□□□□ -0.6
ATP2C1-204ENST00000428331 KDSRQ06136 332 aa11.29□□□□□ -0.6
ATP2C1-204ENST00000428331 FASTKD3Q14CZ7 662 aaKnown RBP11.29□□□□□ -0.6
ATP2C1-204ENST00000428331 LLGL2Q6P1M3 1020 aa11.29□□□□□ -0.6
ATP2C1-204ENST00000428331 DSTYKQ6XUX3 929 aa11.29□□□□□ -0.6
ATP2C1-204ENST00000428331 ZSWIM2Q8NEG5 633 aa11.29□□□□□ -0.6
ATP2C1-204ENST00000428331 DTNBP1Q96EV8 351 aa11.29□□□□□ -0.6
ATP2C1-204ENST00000428331 MCEEQ96PE7 176 aa11.29□□□□□ -0.6
ATP2C1-204ENST00000428331 SYT15Q9BQS2 421 aa11.29□□□□□ -0.6
ATP2C1-204ENST00000428331 THTPAQ9BU02 230 aa11.29□□□□□ -0.6
ATP2C1-204ENST00000428331 STX18Q9P2W9 335 aaKnown RBP11.29□□□□□ -0.6
ATP2C1-204ENST00000428331 CCDC160A6NGH7 325 aa11.29□□□□□ -0.6
ATP2C1-204ENST00000428331 SPDYE5A6NIY4 337 aa11.29□□□□□ -0.6
ATP2C1-204ENST00000428331 GCLCP48506 637 aaPredicted RBP11.29□□□□□ -0.6
ATP2C1-204ENST00000428331 CUL2Q13617 745 aa11.29□□□□□ -0.6
ATP2C1-204ENST00000428331 TRMT5Q32P41 509 aaKnown RBP11.29□□□□□ -0.6
ATP2C1-204ENST00000428331 ZNF568Q3ZCX4 644 aa11.29□□□□□ -0.6
ATP2C1-204ENST00000428331 EFHC2Q5JST6 749 aa11.29□□□□□ -0.6
ATP2C1-204ENST00000428331 MEX3CQ5U5Q3 659 aaKnown RBP11.29□□□□□ -0.6
ATP2C1-204ENST00000428331 CIAPIN1Q6FI81 312 aa11.29□□□□□ -0.6
ATP2C1-204ENST00000428331 STRA6Q9BX79 667 aa11.29□□□□□ -0.6
ATP2C1-204ENST00000428331 CHMP2BQ9UQN3 213 aa11.29□□□□□ -0.6
ATP2C1-204ENST00000428331 LDHAP00338 332 aaKnown RBP11.29□□□□□ -0.6
ATP2C1-204ENST00000428331 NPR1P16066 1061 aa11.29□□□□□ -0.6
ATP2C1-204ENST00000428331 HMGB2P26583 209 aaKnown RBP11.29□□□□□ -0.6
ATP2C1-204ENST00000428331 KLRC2P26717 231 aa11.29□□□□□ -0.6
ATP2C1-204ENST00000428331 GSTA3Q16772 222 aa11.29□□□□□ -0.6
ATP2C1-204ENST00000428331 C1orf220Q5T0J3 134 aa11.29□□□□□ -0.6
ATP2C1-204ENST00000428331 SLFN12LQ6IEE8 588 aa11.29□□□□□ -0.6
ATP2C1-204ENST00000428331 PPM1NQ8N819 430 aa11.29□□□□□ -0.6
ATP2C1-204ENST00000428331 SLC9A2Q9UBY0 812 aa11.29□□□□□ -0.6
ATP2C1-204ENST00000428331 XPO7Q9UIA9 1087 aaKnown RBP11.29□□□□□ -0.6
ATP2C1-204ENST00000428331 AGO2Q9UKV8 859 aaKnown RBP11.29□□□□□ -0.6
ATP2C1-204ENST00000428331 SYNPO2Q9UMS6 1093 aa11.29□□□□□ -0.6
ATP2C1-204ENST00000428331 SPAG6O75602 509 aa11.29□□□□□ -0.6
ATP2C1-204ENST00000428331 DSG1Q02413 1049 aa11.29□□□□□ -0.6
ATP2C1-204ENST00000428331 AP1B1Q10567 949 aa11.29□□□□□ -0.6
ATP2C1-204ENST00000428331 KLF1Q13351 362 aaPredicted RBP11.29□□□□□ -0.6
ATP2C1-204ENST00000428331 TKFCQ3LXA3 575 aa11.29□□□□□ -0.6
ATP2C1-204ENST00000428331 ATP13A4Q4VNC1 1196 aa11.29□□□□□ -0.6
ATP2C1-204ENST00000428331 ARHGEF16Q5VV41 709 aa11.29□□□□□ -0.6
ATP2C1-204ENST00000428331 NUDCD3Q8IVD9 361 aa11.29□□□□□ -0.6
ATP2C1-204ENST00000428331 SCUBE1Q8IWY4 988 aa11.29□□□□□ -0.6
ATP2C1-204ENST00000428331 NME8Q8N427 588 aa11.29□□□□□ -0.6
ATP2C1-204ENST00000428331 KCTD6Q8NC69 237 aa11.29□□□□□ -0.6
ATP2C1-204ENST00000428331 RFWD2Q8NHY2 731 aa11.29□□□□□ -0.6
ATP2C1-204ENST00000428331 ACER1Q8TDN7 264 aa11.29□□□□□ -0.6
ATP2C1-204ENST00000428331 DDX1Q92499 740 aaKnown RBP11.29□□□□□ -0.6
ATP2C1-204ENST00000428331 OXNAD1Q96HP4 312 aaPredicted RBP11.29□□□□□ -0.6
ATP2C1-204ENST00000428331 SLITRK1Q96PX8 696 aa11.29□□□□□ -0.6
ATP2C1-204ENST00000428331 CALN1Q9BXU9 219 aa11.29□□□□□ -0.6
ATP2C1-204ENST00000428331 ACSS3Q9H6R3 686 aa11.29□□□□□ -0.6
ATP2C1-204ENST00000428331 FAM198AQ9UFP1 575 aa11.29□□□□□ -0.6
ATP2C1-204ENST00000428331 H7C0C1 242 aa11.28□□□□□ -0.6
ATP2C1-204ENST00000428331 CST8O60676 142 aa11.28□□□□□ -0.6
ATP2C1-204ENST00000428331 ATP5OP48047 213 aa11.28□□□□□ -0.6
ATP2C1-204ENST00000428331 NCKAP1LP55160 1127 aa11.28□□□□□ -0.6
ATP2C1-204ENST00000428331 MTM1Q13496 603 aa11.28□□□□□ -0.6
ATP2C1-204ENST00000428331 MAPK6Q16659 721 aa11.28□□□□□ -0.6
ATP2C1-204ENST00000428331 STRIP1Q5VSL9 837 aa11.28□□□□□ -0.6
ATP2C1-204ENST00000428331 LRRC38Q5VT99 294 aa11.28□□□□□ -0.6
ATP2C1-204ENST00000428331 RNF220Q5VTB9 566 aa11.28□□□□□ -0.6
ATP2C1-204ENST00000428331 DRICH1Q6PGQ1 229 aaPredicted RBP11.28□□□□□ -0.6
ATP2C1-204ENST00000428331 DARS2Q6PI48 645 aaKnown RBP11.28□□□□□ -0.6
ATP2C1-204ENST00000428331 WDR75Q8IWA0 830 aaKnown RBP11.28□□□□□ -0.6
ATP2C1-204ENST00000428331 TMEM161BQ8NDZ6 487 aa11.28□□□□□ -0.6
ATP2C1-204ENST00000428331 MFSD14AQ96MC6 490 aa11.28□□□□□ -0.6
ATP2C1-204ENST00000428331 SEPT9Q9UHD8 586 aaPredicted RBP11.28□□□□□ -0.6
ATP2C1-204ENST00000428331 IVNS1ABPQ9Y6Y0 642 aa11.28□□□□□ -0.6
ATP2C1-204ENST00000428331 EXTL3O43909 919 aa11.28□□□□□ -0.6
ATP2C1-204ENST00000428331 KRT38O76015 456 aa11.28□□□□□ -0.6
ATP2C1-204ENST00000428331 ZCCHC18P0CG32 403 aa11.28□□□□□ -0.6
ATP2C1-204ENST00000428331 T-ENOLP0DO92 83 aa11.28□□□□□ -0.6
ATP2C1-204ENST00000428331 BGNP21810 368 aa11.28□□□□□ -0.6
ATP2C1-204ENST00000428331 RASSF3Q86WH2 238 aa11.28□□□□□ -0.6
ATP2C1-204ENST00000428331 FRMD8P1Q9BZ68 369 aaPredicted RBP11.28□□□□□ -0.6
ATP2C1-204ENST00000428331 STRIP2Q9ULQ0 834 aa11.28□□□□□ -0.6
ATP2C1-204ENST00000428331 TMX2Q9Y320 296 aa11.28□□□□□ -0.6
ATP2C1-204ENST00000428331 NHSL1Q5SYE7 1610 aa11.28□□□□□ -0.6
ATP2C1-204ENST00000428331 LRRIQ4A6NIV6 560 aa11.28□□□□□ -0.6
ATP2C1-204ENST00000428331 ERFP50548 548 aa11.28□□□□□ -0.6
ATP2C1-204ENST00000428331 RFWD3Q6PCD5 774 aa11.28□□□□□ -0.6
ATP2C1-204ENST00000428331 NIPA1Q7RTP0 329 aa11.28□□□□□ -0.6
ATP2C1-204ENST00000428331 ACTL9Q8TC94 416 aa11.28□□□□□ -0.6
ATP2C1-204ENST00000428331 ACAP3Q96P50 834 aa11.28□□□□□ -0.6
ATP2C1-204ENST00000428331 RBAKQ9NYW8 714 aaPredicted RBP11.28□□□□□ -0.6
ATP2C1-204ENST00000428331 PCDHA10Q9Y5I2 948 aa11.28□□□□□ -0.6
ATP2C1-204ENST00000428331 CREB3O43889 395 aa11.28□□□□□ -0.6
ATP2C1-204ENST00000428331 ITGAVP06756 1048 aa11.28□□□□□ -0.6
ATP2C1-204ENST00000428331 ITGB5P18084 799 aa11.28□□□□□ -0.6
ATP2C1-204ENST00000428331 GLRA2P23416 452 aa11.28□□□□□ -0.6
ATP2C1-204ENST00000428331 YWHAEP62258 255 aaKnown RBP11.28□□□□□ -0.6
ATP2C1-204ENST00000428331 NOMO3P69849 1222 aa11.28□□□□□ -0.6
ATP2C1-204ENST00000428331 ACSBG2Q5FVE4 666 aa11.28□□□□□ -0.6
ATP2C1-204ENST00000428331 SH2D4BQ5SQS7 431 aa11.28□□□□□ -0.6
ATP2C1-204ENST00000428331 MAP3K21Q5TCX8 1036 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms