RNA–Protein interactions for RNA: ENST00000427487.5

HDLBP-215, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 924 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-215	ENST00000427487		I3L4J1	428 aa		12.81	□□□□□ -0.36
HDLBP-215	ENST00000427487		O00370	1275 aa		12.81	□□□□□ -0.36
HDLBP-215	ENST00000427487	LCA5L	O95447	670 aa		12.81	□□□□□ -0.36
HDLBP-215	ENST00000427487	SETSIP	P0DME0	302 aa		12.81	□□□□□ -0.36
HDLBP-215	ENST00000427487	LMO2	P25791	158 aa		12.81	□□□□□ -0.36
HDLBP-215	ENST00000427487	CYLC1	P35663	651 aa	Predicted RBP	12.81	□□□□□ -0.36
HDLBP-215	ENST00000427487	GPR17	Q13304	367 aa		12.81	□□□□□ -0.36
HDLBP-215	ENST00000427487	CFAP221	Q4G0U5	840 aa		12.81	□□□□□ -0.36
HDLBP-215	ENST00000427487	CTXN3	Q4LDR2	81 aa		12.81	□□□□□ -0.36
HDLBP-215	ENST00000427487	TDRD12	Q587J7	1177 aa	Known RBP	12.81	□□□□□ -0.36
HDLBP-215	ENST00000427487	RTP2	Q5QGT7	225 aa		12.81	□□□□□ -0.36
HDLBP-215	ENST00000427487	TPGS2	Q68CL5	300 aa		12.81	□□□□□ -0.36
HDLBP-215	ENST00000427487	C4orf50	Q6ZRC1	276 aa		12.81	□□□□□ -0.36
HDLBP-215	ENST00000427487	SLC47A2	Q86VL8	602 aa		12.81	□□□□□ -0.36
HDLBP-215	ENST00000427487	VPS52	Q8N1B4	723 aa		12.81	□□□□□ -0.36
HDLBP-215	ENST00000427487	SPPL3	Q8TCT6	385 aa		12.81	□□□□□ -0.36
HDLBP-215	ENST00000427487	STK32A	Q8WU08	396 aa		12.81	□□□□□ -0.36
HDLBP-215	ENST00000427487	CCDC42	Q96M95	316 aa		12.81	□□□□□ -0.36
HDLBP-215	ENST00000427487	HEXIM2	Q96MH2	286 aa	Known RBP	12.81	□□□□□ -0.36
HDLBP-215	ENST00000427487	AGPAT1	Q99943	283 aa		12.81	□□□□□ -0.36
HDLBP-215	ENST00000427487	UBXN6	Q9BZV1	441 aa		12.81	□□□□□ -0.36
HDLBP-215	ENST00000427487	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	12.81	□□□□□ -0.36
HDLBP-215	ENST00000427487	CYLD	Q9NQC7	956 aa		12.81	□□□□□ -0.36
HDLBP-215	ENST00000427487	MRPL17	Q9NRX2	175 aa	Known RBP	12.81	□□□□□ -0.36
HDLBP-215	ENST00000427487	HMGXB4	Q9UGU5	601 aa		12.81	□□□□□ -0.36
HDLBP-215	ENST00000427487	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	12.81	□□□□□ -0.36
HDLBP-215	ENST00000427487	YBX2	Q9Y2T7	364 aa	Known RBP	12.81	□□□□□ -0.36
HDLBP-215	ENST00000427487	CEP83	Q9Y592	693 aa		12.81	□□□□□ -0.36
HDLBP-215	ENST00000427487	NME7	Q9Y5B8	376 aa		12.81	□□□□□ -0.36
HDLBP-215	ENST00000427487	TIMM13	Q9Y5L4	95 aa	Predicted RBP	12.81	□□□□□ -0.36
HDLBP-215	ENST00000427487	GRXCR1	A8MXD5	290 aa		12.8	□□□□□ -0.36
HDLBP-215	ENST00000427487	FSCN2	O14926	492 aa		12.8	□□□□□ -0.36
HDLBP-215	ENST00000427487	PNMA6A	P0CW24	399 aa	Predicted RBP	12.8	□□□□□ -0.36
HDLBP-215	ENST00000427487	FMO1	Q01740	532 aa		12.8	□□□□□ -0.36
HDLBP-215	ENST00000427487	PSMD5	Q16401	504 aa		12.8	□□□□□ -0.36
HDLBP-215	ENST00000427487	SLC18A3	Q16572	532 aa		12.8	□□□□□ -0.36
HDLBP-215	ENST00000427487	PKDCC	Q504Y2	493 aa		12.8	□□□□□ -0.36
HDLBP-215	ENST00000427487	ZNF394	Q53GI3	561 aa		12.8	□□□□□ -0.36
HDLBP-215	ENST00000427487	CHRDL2	Q6WN34	429 aa		12.8	□□□□□ -0.36
HDLBP-215	ENST00000427487	ZNF571	Q7Z3V5	609 aa	Predicted RBP	12.8	□□□□□ -0.36
HDLBP-215	ENST00000427487	ACOT1	Q86TX2	421 aa		12.8	□□□□□ -0.36
HDLBP-215	ENST00000427487	NOP9	Q86U38	636 aa	Known RBP	12.8	□□□□□ -0.36
HDLBP-215	ENST00000427487	ANKRD52	Q8NB46	1076 aa		12.8	□□□□□ -0.36
HDLBP-215	ENST00000427487	OR10T2	Q8NGX3	314 aa		12.8	□□□□□ -0.36
HDLBP-215	ENST00000427487	SLC30A5	Q8TAD4	765 aa		12.8	□□□□□ -0.36
HDLBP-215	ENST00000427487	SPPL2B	Q8TCT7	592 aa		12.8	□□□□□ -0.36
HDLBP-215	ENST00000427487	CYFIP2	Q96F07	1278 aa		12.8	□□□□□ -0.36
HDLBP-215	ENST00000427487	MIS12	Q9H081	205 aa		12.8	□□□□□ -0.36
HDLBP-215	ENST00000427487	SLC28A3	Q9HAS3	691 aa		12.8	□□□□□ -0.36
HDLBP-215	ENST00000427487	PNPLA8	Q9NP80	782 aa		12.8	□□□□□ -0.36
HDLBP-215	ENST00000427487	CRTAC1	Q9NQ79	661 aa		12.8	□□□□□ -0.36
HDLBP-215	ENST00000427487	TLR9	Q9NR96	1032 aa		12.8	□□□□□ -0.36
HDLBP-215	ENST00000427487	EIF3CL	B5ME19	914 aa	Known RBP	12.79	□□□□□ -0.36
HDLBP-215	ENST00000427487	THAP12	O43422	761 aa		12.79	□□□□□ -0.36
HDLBP-215	ENST00000427487	CYP1A1	P04798	512 aa	Predicted RBP	12.79	□□□□□ -0.36
HDLBP-215	ENST00000427487	PDGFRB	P09619	1106 aa		12.79	□□□□□ -0.36
HDLBP-215	ENST00000427487	MYOG	P15173	224 aa		12.79	□□□□□ -0.36
HDLBP-215	ENST00000427487	CD19	P15391	556 aa		12.79	□□□□□ -0.36
HDLBP-215	ENST00000427487	TNFAIP3	P21580	790 aa		12.79	□□□□□ -0.36
HDLBP-215	ENST00000427487	DNAJB2	P25686	324 aa		12.79	□□□□□ -0.36
HDLBP-215	ENST00000427487	MAGEA11	P43364	429 aa		12.79	□□□□□ -0.36
HDLBP-215	ENST00000427487	NDUFV1	P49821	464 aa		12.79	□□□□□ -0.36
HDLBP-215	ENST00000427487	BCAT1	P54687	386 aa		12.79	□□□□□ -0.36
HDLBP-215	ENST00000427487	SLC8A3	P57103	927 aa		12.79	□□□□□ -0.36
HDLBP-215	ENST00000427487	SNX16	P57768	344 aa		12.79	□□□□□ -0.36
HDLBP-215	ENST00000427487	CCZ1B	P86790	482 aa		12.79	□□□□□ -0.36
HDLBP-215	ENST00000427487	CCZ1	P86791	482 aa	Predicted RBP	12.79	□□□□□ -0.36
HDLBP-215	ENST00000427487	ARID5A	Q03989	594 aa		12.79	□□□□□ -0.36
HDLBP-215	ENST00000427487	RAB33A	Q14088	237 aa		12.79	□□□□□ -0.36
HDLBP-215	ENST00000427487	SMC1A	Q14683	1233 aa	Known RBP	12.79	□□□□□ -0.36
HDLBP-215	ENST00000427487	PTPN14	Q15678	1187 aa		12.79	□□□□□ -0.36
HDLBP-215	ENST00000427487	PRPF38B	Q5VTL8	546 aa	Known RBP	12.79	□□□□□ -0.36
HDLBP-215	ENST00000427487	PPP2R2D	Q66LE6	453 aa		12.79	□□□□□ -0.36
HDLBP-215	ENST00000427487	VSTM1	Q6UX27	236 aa		12.79	□□□□□ -0.36
HDLBP-215	ENST00000427487	TAS1R1	Q7RTX1	841 aa		12.79	□□□□□ -0.36
HDLBP-215	ENST00000427487	CEP57	Q86XR8	500 aa		12.79	□□□□□ -0.36
HDLBP-215	ENST00000427487	TXLNB	Q8N3L3	684 aa		12.79	□□□□□ -0.36
HDLBP-215	ENST00000427487	TMEM35B	Q8NCS4	154 aa		12.79	□□□□□ -0.36
HDLBP-215	ENST00000427487	FBXO22	Q8NEZ5	403 aa		12.79	□□□□□ -0.36
HDLBP-215	ENST00000427487	ZNF461	Q8TAF7	563 aa		12.79	□□□□□ -0.36
HDLBP-215	ENST00000427487	OLIG1	Q8TAK6	271 aa		12.79	□□□□□ -0.36
HDLBP-215	ENST00000427487	RIN2	Q8WYP3	895 aa	Predicted RBP	12.79	□□□□□ -0.36
HDLBP-215	ENST00000427487	TFAP2B	Q92481	460 aa		12.79	□□□□□ -0.36
HDLBP-215	ENST00000427487	TIFA	Q96CG3	184 aa		12.79	□□□□□ -0.36
HDLBP-215	ENST00000427487	SMARCD1	Q96GM5	515 aa		12.79	□□□□□ -0.36
HDLBP-215	ENST00000427487	VCPIP1	Q96JH7	1222 aa		12.79	□□□□□ -0.36
HDLBP-215	ENST00000427487	EIF3C	Q99613	913 aa	Known RBP	12.79	□□□□□ -0.36
HDLBP-215	ENST00000427487	CHP1	Q99653	195 aa		12.79	□□□□□ -0.36
HDLBP-215	ENST00000427487	C17orf80	Q9BSJ5	609 aa		12.79	□□□□□ -0.36
HDLBP-215	ENST00000427487	DEF6	Q9H4E7	631 aa		12.79	□□□□□ -0.36
HDLBP-215	ENST00000427487	CSNK1G1	Q9HCP0	422 aa		12.79	□□□□□ -0.36
HDLBP-215	ENST00000427487	LUC7L	Q9NQ29	371 aa	Known RBP	12.79	□□□□□ -0.36
HDLBP-215	ENST00000427487	HESX1	Q9UBX0	185 aa		12.79	□□□□□ -0.36
HDLBP-215	ENST00000427487	INTU	Q9ULD6	942 aa		12.79	□□□□□ -0.36
HDLBP-215	ENST00000427487	NENF	Q9UMX5	172 aa		12.79	□□□□□ -0.36
HDLBP-215	ENST00000427487	EPN1	Q9Y6I3	576 aa	Predicted RBP	12.79	□□□□□ -0.36
HDLBP-215	ENST00000427487	MYBPHL	A2RUH7	354 aa		12.78	□□□□□ -0.36
HDLBP-215	ENST00000427487	AKR1B10	O60218	316 aa		12.78	□□□□□ -0.36
HDLBP-215	ENST00000427487	ABLIM3	O94929	683 aa		12.78	□□□□□ -0.36
HDLBP-215	ENST00000427487	IPO7	O95373	1038 aa	Known RBP	12.78	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms