RNA–Protein interactions for RNA: ENST00000427414.2

SH3D19-204, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-204ENST00000427414 TPX2Q9ULW0 747 aaKnown RBP9.04□□□□□ -0.96
SH3D19-204ENST00000427414 GIT1Q9Y2X7 761 aa9.04□□□□□ -0.96
SH3D19-204ENST00000427414 TREHO43280 583 aa9.04□□□□□ -0.96
SH3D19-204ENST00000427414 PARNO95453 639 aaKnown RBP9.04□□□□□ -0.96
SH3D19-204ENST00000427414 FTCDO95954 541 aa9.04□□□□□ -0.96
SH3D19-204ENST00000427414 CST3P01034 146 aaPredicted RBP9.04□□□□□ -0.96
SH3D19-204ENST00000427414 KRT5P13647 590 aa9.04□□□□□ -0.96
SH3D19-204ENST00000427414 POLR2BP30876 1174 aaKnown RBP9.04□□□□□ -0.96
SH3D19-204ENST00000427414 NOMO3P69849 1222 aa9.04□□□□□ -0.96
SH3D19-204ENST00000427414 TFAMQ00059 246 aaKnown RBP9.04□□□□□ -0.96
SH3D19-204ENST00000427414 NBPF20Q3BBV1 942 aa9.04□□□□□ -0.96
SH3D19-204ENST00000427414 ANKRD20A8PQ5CZ79 823 aa9.04□□□□□ -0.96
SH3D19-204ENST00000427414 UBXN11Q5T124 520 aa9.04□□□□□ -0.96
SH3D19-204ENST00000427414 PLEKHA7Q6IQ23 1121 aa9.04□□□□□ -0.96
SH3D19-204ENST00000427414 MON1BQ7L1V2 547 aa9.04□□□□□ -0.96
SH3D19-204ENST00000427414 PEX26Q7Z412 305 aa9.04□□□□□ -0.96
SH3D19-204ENST00000427414 KLHL7Q8IXQ5 586 aa9.04□□□□□ -0.96
SH3D19-204ENST00000427414 UBL4BQ8N7F7 174 aa9.04□□□□□ -0.96
SH3D19-204ENST00000427414 OR2W6PQ8NHA6 318 aa9.04□□□□□ -0.96
SH3D19-204ENST00000427414 STK32AQ8WU08 396 aa9.04□□□□□ -0.96
SH3D19-204ENST00000427414 MAIP1Q8WWC4 291 aa9.04□□□□□ -0.96
SH3D19-204ENST00000427414 DNAJB3Q8WWF6 145 aa9.04□□□□□ -0.96
SH3D19-204ENST00000427414 KAT5Q92993 513 aa9.04□□□□□ -0.96
SH3D19-204ENST00000427414 CISHQ9NSE2 258 aa9.04□□□□□ -0.96
SH3D19-204ENST00000427414 TMEM59LQ9UK28 342 aa9.04□□□□□ -0.96
SH3D19-204ENST00000427414 PIRO00625 290 aa9.03□□□□□ -0.96
SH3D19-204ENST00000427414 TRAPPC3O43617 180 aa9.03□□□□□ -0.96
SH3D19-204ENST00000427414 CILPO75339 1184 aa9.03□□□□□ -0.96
SH3D19-204ENST00000427414 GJB1P08034 283 aa9.03□□□□□ -0.96
SH3D19-204ENST00000427414 MMEP08473 750 aa9.03□□□□□ -0.96
SH3D19-204ENST00000427414 RPSAP08865 295 aaKnown RBP9.03□□□□□ -0.96
SH3D19-204ENST00000427414 PAX7P23759 505 aa9.03□□□□□ -0.96
SH3D19-204ENST00000427414 RPL9P32969 192 aaKnown RBP9.03□□□□□ -0.96
SH3D19-204ENST00000427414 NSFP46459 744 aaKnown RBP9.03□□□□□ -0.96
SH3D19-204ENST00000427414 SATB1Q01826 763 aa9.03□□□□□ -0.96
SH3D19-204ENST00000427414 CNGA2Q16280 664 aa9.03□□□□□ -0.96
SH3D19-204ENST00000427414 QPCTQ16769 361 aa9.03□□□□□ -0.96
SH3D19-204ENST00000427414 CACNA2D3Q8IZS8 1091 aa9.03□□□□□ -0.96
SH3D19-204ENST00000427414 FNIP1Q8TF40 1166 aa9.03□□□□□ -0.96
SH3D19-204ENST00000427414 SLC20A1Q8WUM9 679 aa9.03□□□□□ -0.96
SH3D19-204ENST00000427414 ZNF606Q8WXB4 792 aa9.03□□□□□ -0.96
SH3D19-204ENST00000427414 SEC16BQ96JE7 1060 aa9.03□□□□□ -0.96
SH3D19-204ENST00000427414 PACSIN1Q9BY11 444 aa9.03□□□□□ -0.96
SH3D19-204ENST00000427414 FAM129AQ9BZQ8 928 aa9.03□□□□□ -0.96
SH3D19-204ENST00000427414 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.03□□□□□ -0.96
SH3D19-204ENST00000427414 BARX2Q9UMQ3 279 aaPredicted RBP9.03□□□□□ -0.96
SH3D19-204ENST00000427414 PHF24Q9UPV7 400 aa9.03□□□□□ -0.96
SH3D19-204ENST00000427414 ARHGEF37A1IGU5 675 aa9.03□□□□□ -0.96
SH3D19-204ENST00000427414 RAD51CO43502 376 aa9.03□□□□□ -0.96
SH3D19-204ENST00000427414 NPTXRO95502 500 aa9.03□□□□□ -0.96
SH3D19-204ENST00000427414 PRKAR2AP13861 404 aaKnown RBP9.03□□□□□ -0.96
SH3D19-204ENST00000427414 MMP8P22894 467 aa9.03□□□□□ -0.96
SH3D19-204ENST00000427414 SLC8A1P32418 973 aa9.03□□□□□ -0.96
SH3D19-204ENST00000427414 GBP2P32456 591 aaPredicted RBP9.03□□□□□ -0.96
SH3D19-204ENST00000427414 CTNNA1P35221 906 aaKnown RBP9.03□□□□□ -0.96
SH3D19-204ENST00000427414 HSPA9P38646 679 aaKnown RBP9.03□□□□□ -0.96
SH3D19-204ENST00000427414 GABRB2P47870 512 aa9.03□□□□□ -0.96
SH3D19-204ENST00000427414 SCTRP47872 440 aa9.03□□□□□ -0.96
SH3D19-204ENST00000427414 CRYMQ14894 314 aa9.03□□□□□ -0.96
SH3D19-204ENST00000427414 KIZQ2M2Z5 673 aa9.03□□□□□ -0.96
SH3D19-204ENST00000427414 LRRC38Q5VT99 294 aa9.03□□□□□ -0.96
SH3D19-204ENST00000427414 ARCQ7LC44 396 aa9.03□□□□□ -0.96
SH3D19-204ENST00000427414 NIPA2Q8N8Q9 360 aa9.03□□□□□ -0.96
SH3D19-204ENST00000427414 HPDLQ96IR7 371 aa9.03□□□□□ -0.96
SH3D19-204ENST00000427414 ZIC5Q96T25 663 aa9.03□□□□□ -0.96
SH3D19-204ENST00000427414 THAP2Q9H0W7 228 aa9.03□□□□□ -0.96
SH3D19-204ENST00000427414 ERVK-5Q9HDB9 667 aa9.03□□□□□ -0.96
SH3D19-204ENST00000427414 PARVAQ9NVD7 372 aa9.03□□□□□ -0.96
SH3D19-204ENST00000427414 PACSIN2Q9UNF0 486 aaPredicted RBP9.03□□□□□ -0.96
SH3D19-204ENST00000427414 TLR3O15455 904 aaKnown RBP9.02□□□□□ -0.97
SH3D19-204ENST00000427414 ERBB2P04626 1255 aa9.02□□□□□ -0.97
SH3D19-204ENST00000427414 NFICP08651 508 aa9.02□□□□□ -0.97
SH3D19-204ENST00000427414 HSD17B3P37058 310 aa9.02□□□□□ -0.97
SH3D19-204ENST00000427414 TNNC1P63316 161 aa9.02□□□□□ -0.97
SH3D19-204ENST00000427414 HIC1Q14526 733 aa9.02□□□□□ -0.97
SH3D19-204ENST00000427414 DSC3Q14574 896 aa9.02□□□□□ -0.97
SH3D19-204ENST00000427414 TRIM71Q2Q1W2 868 aaKnown RBP9.02□□□□□ -0.97
SH3D19-204ENST00000427414 SV2CQ496J9 727 aa9.02□□□□□ -0.97
SH3D19-204ENST00000427414 ARHGAP17Q68EM7 881 aa9.02□□□□□ -0.97
SH3D19-204ENST00000427414 TMEM270Q6UE05 265 aa9.02□□□□□ -0.97
SH3D19-204ENST00000427414 CPLX4Q7Z7G2 160 aa9.02□□□□□ -0.97
SH3D19-204ENST00000427414 ZDHHC17Q8IUH5 632 aa9.02□□□□□ -0.97
SH3D19-204ENST00000427414 KIRREL3Q8IZU9 778 aa9.02□□□□□ -0.97
SH3D19-204ENST00000427414 TOP6BLQ8N6T0 577 aa9.02□□□□□ -0.97
SH3D19-204ENST00000427414 C3orf20Q8ND61 904 aa9.02□□□□□ -0.97
SH3D19-204ENST00000427414 CD101Q93033 1021 aa9.02□□□□□ -0.97
SH3D19-204ENST00000427414 PGBD4Q96DM1 585 aa9.02□□□□□ -0.97
SH3D19-204ENST00000427414 CPB2Q96IY4 423 aa9.02□□□□□ -0.97
SH3D19-204ENST00000427414 UROC1Q96N76 676 aa9.02□□□□□ -0.97
SH3D19-204ENST00000427414 PI4K2AQ9BTU6 479 aa9.02□□□□□ -0.97
SH3D19-204ENST00000427414 HMX1Q9NP08 348 aaPredicted RBP9.02□□□□□ -0.97
SH3D19-204ENST00000427414 SLC12A6Q9UHW9 1150 aa9.02□□□□□ -0.97
SH3D19-204ENST00000427414 ASGR1P07306 291 aa9.02□□□□□ -0.97
SH3D19-204ENST00000427414 BEX3Q00994 111 aa9.02□□□□□ -0.97
SH3D19-204ENST00000427414 IFFO1Q0D2I5 559 aa9.02□□□□□ -0.97
SH3D19-204ENST00000427414 ZNF268Q14587 947 aaPredicted RBP9.02□□□□□ -0.97
SH3D19-204ENST00000427414 NAA25Q14CX7 972 aa9.02□□□□□ -0.97
SH3D19-204ENST00000427414 KCNA10Q16322 511 aa9.02□□□□□ -0.97
SH3D19-204ENST00000427414 GKAP1Q5VSY0 366 aaPredicted RBP9.02□□□□□ -0.97
SH3D19-204ENST00000427414 LRIG3Q6UXM1 1119 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms