RNA–Protein interactions for RNA: ENST00000427076.5

POLR2J4-202, Transcript of RNA polymerase II subunit J4, pseudogene, humanhuman

TSL 1 (best) BASIC

Gene POLR2J4, Length 6,466 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J4-202ENST00000427076 TMEM117Q9H0C3 514 aa11.82□□□□□ -0.52
POLR2J4-202ENST00000427076 MUC3BQ9H195 1237 aa11.82□□□□□ -0.52
POLR2J4-202ENST00000427076 VIPAS39Q9H9C1 493 aa11.82□□□□□ -0.52
POLR2J4-202ENST00000427076 CHORDC1Q9UHD1 332 aaPredicted RBP11.82□□□□□ -0.52
POLR2J4-202ENST00000427076 MAFFQ9ULX9 164 aa11.82□□□□□ -0.52
POLR2J4-202ENST00000427076 MAST1Q9Y2H9 1570 aa11.82□□□□□ -0.52
POLR2J4-202ENST00000427076 EMSYQ7Z589 1322 aa11.82□□□□□ -0.52
POLR2J4-202ENST00000427076 CPSF4O95639 269 aaKnown RBP11.82□□□□□ -0.52
POLR2J4-202ENST00000427076 NCK1P16333 377 aa11.82□□□□□ -0.52
POLR2J4-202ENST00000427076 CHRM3P20309 590 aa11.82□□□□□ -0.52
POLR2J4-202ENST00000427076 TALDO1P37837 337 aa11.82□□□□□ -0.52
POLR2J4-202ENST00000427076 LSM3P62310 102 aaKnown RBP11.82□□□□□ -0.52
POLR2J4-202ENST00000427076 C3orf62Q6ZUJ4 267 aa11.82□□□□□ -0.52
POLR2J4-202ENST00000427076 UBE2Q1Q7Z7E8 422 aa11.82□□□□□ -0.52
POLR2J4-202ENST00000427076 DHX40Q8IX18 779 aaKnown RBP11.82□□□□□ -0.52
POLR2J4-202ENST00000427076 FAM45AQ8TCE6 357 aa11.82□□□□□ -0.52
POLR2J4-202ENST00000427076 C8orf4Q9NR00 106 aa11.82□□□□□ -0.52
POLR2J4-202ENST00000427076 TOPORSQ9NS56 1045 aaPredicted RBP11.82□□□□□ -0.52
POLR2J4-202ENST00000427076 ZNF624Q9P2J8 865 aaPredicted RBP11.82□□□□□ -0.52
POLR2J4-202ENST00000427076 EFR3BQ9Y2G0 817 aa11.82□□□□□ -0.52
POLR2J4-202ENST00000427076 KIF24Q5T7B8 1368 aa11.82□□□□□ -0.52
POLR2J4-202ENST00000427076 COPAP53621 1224 aa11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 SEMA3FQ13275 785 aa11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 KRR1Q13601 381 aaKnown RBP11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 BYSLQ13895 437 aaKnown RBP11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 TTC39BQ5VTQ0 682 aaPredicted RBP11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 LSM14AQ8ND56 463 aaKnown RBP11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 IPMKQ8NFU5 416 aa11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 OXER1Q8TDS5 423 aa11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 FAM136AQ96C01 138 aa11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 KIF12Q96FN5 646 aa11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 ART5Q96L15 291 aa11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 KATNAL1Q9BW62 490 aa11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 CELF4Q9BZC1 486 aaKnown RBP11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 PCDH12Q9NPG4 1184 aa11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 SLC39A10Q9ULF5 831 aa11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 ZHX2Q9Y6X8 837 aa11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 KDM5AP29375 1690 aaKnown RBP11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 FAM135BQ49AJ0 1406 aa11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 ATP6V1C1P21283 382 aa11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 POLD3Q15054 466 aaPredicted RBP11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 ATPAF2Q8N5M1 289 aa11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 SLC35G2Q8TBE7 412 aa11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 ZIM3Q96PE6 472 aa11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 TMEM79Q9BSE2 394 aa11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 GRIP2Q9C0E4 1043 aa11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 USP17L5A8MUK1 530 aa11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 NQO1P15559 274 aaKnown RBP11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 ADD2P35612 726 aa11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 SCTRP47872 440 aa11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 NUP107P57740 925 aa11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 KCNB1Q14721 858 aa11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 KBTBD12Q3ZCT8 623 aa11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 LRRC8DQ7L1W4 858 aa11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 CCDC33Q8N5R6 958 aa11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 DPP10Q8N608 796 aa11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 GIMAP8Q8ND71 665 aaPredicted RBP11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 TSPAN17Q96FV3 270 aa11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 RBBP8Q99708 897 aa11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 UNKQ9C0B0 810 aaKnown RBP11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 ERBB3P21860 1342 aa11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 ZNF839A8K0R7 811 aa11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 hCG_1984214I3L0E3 225 aa11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 FAM20BO75063 409 aa11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 RRM2P31350 389 aa11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 POU4F1Q01851 419 aa11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 FCHO2Q0JRZ9 810 aa11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 PTGISQ16647 500 aa11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 KCTD19Q17RG1 926 aaPredicted RBP11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 KNOP1Q1ED39 458 aaKnown RBP11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 PLA2G4EQ3MJ16 856 aa11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 SWSAP1Q6NVH7 229 aa11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 CLVS1Q8IUQ0 354 aaPredicted RBP11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 ZNF713Q8N859 430 aaPredicted RBP11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 PMM1Q92871 262 aa11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 AGPAT1Q99943 283 aa11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 USP17L15C9J2P7 530 aa11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 USP17L13C9JLJ4 530 aa11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 USP17L11C9JVI0 530 aa11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 USP17L18D6R9N7 530 aa11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 USP17L22D6RA61 530 aa11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 USP17L17D6RBQ6 530 aa11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 USP17L19D6RCP7 530 aa11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 USP17L20D6RJB6 530 aa11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 CIAO1O76071 339 aa11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 FCER1AP12319 257 aa11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 PRKCQQ04759 706 aa11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 USP17L24Q0WX57 530 aa11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 TWF1Q12792 350 aa11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 USP17L6PQ6QN14 398 aa11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 MACC1Q6ZN28 852 aa11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 HDAC2Q92769 488 aaKnown RBP11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 E2F7Q96AV8 911 aa11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 MCEEQ96PE7 176 aa11.81□□□□□ -0.52
POLR2J4-202ENST00000427076 PHF2O75151 1096 aa11.8□□□□□ -0.52
POLR2J4-202ENST00000427076 CLPTM1O96005 669 aa11.8□□□□□ -0.52
POLR2J4-202ENST00000427076 RALAP11233 206 aa11.8□□□□□ -0.52
POLR2J4-202ENST00000427076 TBXAS1P24557 533 aaPredicted RBP11.8□□□□□ -0.52
POLR2J4-202ENST00000427076 HSD17B4P51659 736 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms