RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 H3BRB1 525 aa12.2□□□□□ -0.46
UBR4-207ENST00000425413 SGK1O00141 431 aa12.2□□□□□ -0.46
UBR4-207ENST00000425413 GH1P01241 217 aa12.2□□□□□ -0.46
UBR4-207ENST00000425413 ERBB2P04626 1255 aa12.2□□□□□ -0.46
UBR4-207ENST00000425413 RGS7P49802 495 aa12.2□□□□□ -0.46
UBR4-207ENST00000425413 NRLP54845 237 aa12.2□□□□□ -0.46
UBR4-207ENST00000425413 CCL15Q16663 113 aa12.2□□□□□ -0.46
UBR4-207ENST00000425413 GLRA4Q5JXX5 417 aa12.2□□□□□ -0.46
UBR4-207ENST00000425413 PRAMEF19Q5SWL8 479 aa12.2□□□□□ -0.46
UBR4-207ENST00000425413 SH3PXD2AQ5TCZ1 1133 aa12.2□□□□□ -0.46
UBR4-207ENST00000425413 RHBDF2Q6PJF5 856 aa12.2□□□□□ -0.46
UBR4-207ENST00000425413 RCOR2Q8IZ40 523 aa12.2□□□□□ -0.46
UBR4-207ENST00000425413 SLC4A11Q8NBS3 891 aa12.2□□□□□ -0.46
UBR4-207ENST00000425413 LENG1Q96BZ8 264 aaPredicted RBP12.2□□□□□ -0.46
UBR4-207ENST00000425413 HPDLQ96IR7 371 aa12.2□□□□□ -0.46
UBR4-207ENST00000425413 XPO6Q96QU8 1125 aaKnown RBP12.2□□□□□ -0.46
UBR4-207ENST00000425413 PRMT1Q99873 361 aaKnown RBP12.2□□□□□ -0.46
UBR4-207ENST00000425413 TRAIPQ9BWF2 469 aa12.2□□□□□ -0.46
UBR4-207ENST00000425413 ADAM7Q9H2U9 754 aa12.2□□□□□ -0.46
UBR4-207ENST00000425413 TUT1Q9H6E5 874 aaKnown RBP12.2□□□□□ -0.46
UBR4-207ENST00000425413 INTS9Q9NV88 658 aaKnown RBP12.2□□□□□ -0.46
UBR4-207ENST00000425413 SETD4Q9NVD3 440 aa12.2□□□□□ -0.46
UBR4-207ENST00000425413 NINJ2Q9NZG7 142 aa12.2□□□□□ -0.46
UBR4-207ENST00000425413 BTBD19C9JJ37 291 aa12.2□□□□□ -0.46
UBR4-207ENST00000425413 LIASO43766 372 aa12.2□□□□□ -0.46
UBR4-207ENST00000425413 LSM8O95777 96 aaKnown RBP12.2□□□□□ -0.46
UBR4-207ENST00000425413 FASTKD3Q14CZ7 662 aaKnown RBP12.2□□□□□ -0.46
UBR4-207ENST00000425413 OTUD6BQ8N6M0 293 aa12.2□□□□□ -0.46
UBR4-207ENST00000425413 UPF1Q92900 1129 aaKnown RBP eCLIP12.2□□□□□ -0.46
UBR4-207ENST00000425413 PGM2Q96G03 612 aa12.2□□□□□ -0.46
UBR4-207ENST00000425413 RBM41Q96IZ5 413 aaKnown RBP12.2□□□□□ -0.46
UBR4-207ENST00000425413 PRMT7Q9NVM4 692 aaPredicted RBP12.2□□□□□ -0.46
UBR4-207ENST00000425413 DDX20Q9UHI6 824 aaKnown RBP12.2□□□□□ -0.46
UBR4-207ENST00000425413 TCRBV5S1A1TA0A578 114 aa12.19□□□□□ -0.46
UBR4-207ENST00000425413 MICAL2O94851 1124 aa12.19□□□□□ -0.46
UBR4-207ENST00000425413 TJP3O95049 919 aa12.19□□□□□ -0.46
UBR4-207ENST00000425413 SLC26A2P50443 739 aa12.19□□□□□ -0.46
UBR4-207ENST00000425413 PTPN11Q06124 597 aaPredicted RBP12.19□□□□□ -0.46
UBR4-207ENST00000425413 LAMC2Q13753 1193 aa12.19□□□□□ -0.46
UBR4-207ENST00000425413 AMHR2Q16671 573 aa12.19□□□□□ -0.46
UBR4-207ENST00000425413 EXOC8Q8IYI6 725 aa12.19□□□□□ -0.46
UBR4-207ENST00000425413 ARFGAP1Q8N6T3 406 aa12.19□□□□□ -0.46
UBR4-207ENST00000425413 CCDC89Q8N998 374 aa12.19□□□□□ -0.46
UBR4-207ENST00000425413 C3orf20Q8ND61 904 aa12.19□□□□□ -0.46
UBR4-207ENST00000425413 KCNN1Q92952 543 aa12.19□□□□□ -0.46
UBR4-207ENST00000425413 ARHGEF2Q92974 986 aaKnown RBP12.19□□□□□ -0.46
UBR4-207ENST00000425413 PIWIL1Q96J94 861 aaKnown RBP12.19□□□□□ -0.46
UBR4-207ENST00000425413 RBM15Q96T37 977 aaKnown RBP eCLIP12.19□□□□□ -0.463e-7■□□□□ 8.3
UBR4-207ENST00000425413 LPIN3Q9BQK8 851 aa12.19□□□□□ -0.46
UBR4-207ENST00000425413 CALN1Q9BXU9 219 aa12.19□□□□□ -0.46
UBR4-207ENST00000425413 SAYSD1Q9NPB0 183 aa12.19□□□□□ -0.46
UBR4-207ENST00000425413 H0YHG0 523 aa12.19□□□□□ -0.46
UBR4-207ENST00000425413 LRCH4O75427 683 aa12.19□□□□□ -0.46
UBR4-207ENST00000425413 TTC4O95801 387 aa12.19□□□□□ -0.46
UBR4-207ENST00000425413 VIMP08670 466 aaKnown RBP12.19□□□□□ -0.46
UBR4-207ENST00000425413 CETPP11597 493 aa12.19□□□□□ -0.46
UBR4-207ENST00000425413 EIF4BP23588 611 aaKnown RBP12.19□□□□□ -0.46
UBR4-207ENST00000425413 MAN1A1P33908 653 aa12.19□□□□□ -0.46
UBR4-207ENST00000425413 YWHAEP62258 255 aaKnown RBP12.19□□□□□ -0.46
UBR4-207ENST00000425413 SLC20A2Q08357 652 aa12.19□□□□□ -0.46
UBR4-207ENST00000425413 GRM1Q13255 1194 aa12.19□□□□□ -0.46
UBR4-207ENST00000425413 TMEM132DQ14C87 1099 aa12.19□□□□□ -0.46
UBR4-207ENST00000425413 FAM102AQ5T9C2 384 aaPredicted RBP12.19□□□□□ -0.46
UBR4-207ENST00000425413 FBXW10Q5XX13 1052 aa12.19□□□□□ -0.46
UBR4-207ENST00000425413 MAMDC4Q6UXC1 1216 aa12.19□□□□□ -0.46
UBR4-207ENST00000425413 USP50Q70EL3 339 aaPredicted RBP12.19□□□□□ -0.46
UBR4-207ENST00000425413 TRMT10CQ7L0Y3 403 aaKnown RBP12.19□□□□□ -0.46
UBR4-207ENST00000425413 EXOC3L1Q86VI1 746 aa12.19□□□□□ -0.46
UBR4-207ENST00000425413 CYP4X1Q8N118 509 aa12.19□□□□□ -0.46
UBR4-207ENST00000425413 GDAP1Q8TB36 358 aa12.19□□□□□ -0.46
UBR4-207ENST00000425413 LRRN4Q8WUT4 740 aa12.19□□□□□ -0.46
UBR4-207ENST00000425413 SLCO2A1Q92959 643 aa12.19□□□□□ -0.46
UBR4-207ENST00000425413 KIF12Q96FN5 646 aa12.19□□□□□ -0.46
UBR4-207ENST00000425413 PPEF2O14830 753 aa12.18□□□□□ -0.46
UBR4-207ENST00000425413 CST8O60676 142 aa12.18□□□□□ -0.46
UBR4-207ENST00000425413 MAP3K6O95382 1288 aa12.18□□□□□ -0.46
UBR4-207ENST00000425413 NDST1P52848 882 aa12.18□□□□□ -0.46
UBR4-207ENST00000425413 GAD2Q05329 585 aa12.18□□□□□ -0.46
UBR4-207ENST00000425413 ILDR2Q71H61 639 aa12.18□□□□□ -0.46
UBR4-207ENST00000425413 DYDC1Q8WWB3 177 aa12.18□□□□□ -0.46
UBR4-207ENST00000425413 FAM49BQ9NUQ9 324 aa12.18□□□□□ -0.46
UBR4-207ENST00000425413 CAPN7Q9Y6W3 813 aa12.18□□□□□ -0.46
UBR4-207ENST00000425413 hCG_1818297A0A087WSY0 165 aa12.18□□□□□ -0.46
UBR4-207ENST00000425413 ASAP2O43150 1006 aa12.18□□□□□ -0.46
UBR4-207ENST00000425413 HCRTO43612 131 aa12.18□□□□□ -0.46
UBR4-207ENST00000425413 IL18RAPO95256 599 aa12.18□□□□□ -0.46
UBR4-207ENST00000425413 SNAI1O95863 264 aaPredicted RBP12.18□□□□□ -0.46
UBR4-207ENST00000425413 AGTP01019 485 aa12.18□□□□□ -0.46
UBR4-207ENST00000425413 SMPD1P17405 629 aa12.18□□□□□ -0.46
UBR4-207ENST00000425413 PIGHQ14442 188 aaPredicted RBP12.18□□□□□ -0.46
UBR4-207ENST00000425413 ZNF792Q3KQV3 632 aa12.18□□□□□ -0.46
UBR4-207ENST00000425413 TFDP3Q5H9I0 405 aa12.18□□□□□ -0.46
UBR4-207ENST00000425413 ZNF484Q5JVG2 852 aa12.18□□□□□ -0.46
UBR4-207ENST00000425413 SPDYCQ5MJ68 293 aa12.18□□□□□ -0.46
UBR4-207ENST00000425413 PPP1R15BQ5SWA1 713 aa12.18□□□□□ -0.46
UBR4-207ENST00000425413 MTHFD1LQ6UB35 978 aa12.18□□□□□ -0.46
UBR4-207ENST00000425413 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.18□□□□□ -0.46
UBR4-207ENST00000425413 TMEM176AQ96HP8 235 aa12.18□□□□□ -0.46
UBR4-207ENST00000425413 CABS1Q96KC9 395 aa12.18□□□□□ -0.46
UBR4-207ENST00000425413 C16orf70Q9BSU1 422 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms