RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 CCDC42Q96M95 316 aa14.3□□□□□ -0.12
PRPF39-202ENST00000424478 TRMT1Q9NXH9 659 aaKnown RBP14.3□□□□□ -0.12
PRPF39-202ENST00000424478 PCDHB8Q9UN66 801 aa14.3□□□□□ -0.12
PRPF39-202ENST00000424478 AKR1B10O60218 316 aa14.29□□□□□ -0.12
PRPF39-202ENST00000424478 BEST1O76090 585 aa14.29□□□□□ -0.12
PRPF39-202ENST00000424478 KIF11P52732 1056 aa14.29□□□□□ -0.12
PRPF39-202ENST00000424478 ERVFC1P60507 584 aa14.29□□□□□ -0.12
PRPF39-202ENST00000424478 SLC39A12Q504Y0 691 aa14.29□□□□□ -0.12
PRPF39-202ENST00000424478 TRIM44Q96DX7 344 aaPredicted RBP14.29□□□□□ -0.12
PRPF39-202ENST00000424478 AGPAT1Q99943 283 aa14.29□□□□□ -0.12
PRPF39-202ENST00000424478 RNF216Q9NWF9 866 aaPredicted RBP14.29□□□□□ -0.12
PRPF39-202ENST00000424478 PCDHB12Q9Y5F1 795 aa14.29□□□□□ -0.12
PRPF39-202ENST00000424478 CDY1Q9Y6F8 540 aa14.29□□□□□ -0.12
PRPF39-202ENST00000424478 EPOPA6NHQ4 379 aa14.29□□□□□ -0.12
PRPF39-202ENST00000424478 USP27XA6NNY8 438 aa14.29□□□□□ -0.12
PRPF39-202ENST00000424478 TMEM189-UBE2V1I3L0A0 370 aa14.29□□□□□ -0.12
PRPF39-202ENST00000424478 GRM6O15303 877 aa14.29□□□□□ -0.12
PRPF39-202ENST00000424478 ATMINO43313 823 aaPredicted RBP14.29□□□□□ -0.12
PRPF39-202ENST00000424478 TACC1O75410 805 aa14.29□□□□□ -0.12
PRPF39-202ENST00000424478 WARSP23381 471 aaKnown RBP14.29□□□□□ -0.12
PRPF39-202ENST00000424478 HNRNPH3P31942 346 aaKnown RBP14.29□□□□□ -0.12
PRPF39-202ENST00000424478 IRS1P35568 1242 aa14.29□□□□□ -0.12
PRPF39-202ENST00000424478 TAP1Q03518 808 aa14.29□□□□□ -0.12
PRPF39-202ENST00000424478 SDHAF4Q5VUM1 108 aa14.29□□□□□ -0.12
PRPF39-202ENST00000424478 CYP26C1Q6V0L0 522 aa14.29□□□□□ -0.12
PRPF39-202ENST00000424478 SP7Q8TDD2 431 aaPredicted RBP14.29□□□□□ -0.12
PRPF39-202ENST00000424478 GPR152Q8TDT2 470 aa14.29□□□□□ -0.12
PRPF39-202ENST00000424478 PCED1BQ96HM7 432 aa14.29□□□□□ -0.12
PRPF39-202ENST00000424478 TTPALQ9BTX7 342 aa14.29□□□□□ -0.12
PRPF39-202ENST00000424478 TRIM10Q9UDY6 481 aa14.29□□□□□ -0.12
PRPF39-202ENST00000424478 CYTH4Q9UIA0 394 aa14.29□□□□□ -0.12
PRPF39-202ENST00000424478 TSPAN16Q9UKR8 245 aa14.29□□□□□ -0.12
PRPF39-202ENST00000424478 CNTN6Q9UQ52 1028 aa14.29□□□□□ -0.12
PRPF39-202ENST00000424478 REXO2Q9Y3B8 237 aaKnown RBP14.29□□□□□ -0.12
PRPF39-202ENST00000424478 PTPN1P18031 435 aaKnown RBP14.28□□□□□ -0.12
PRPF39-202ENST00000424478 RGS7P49802 495 aa14.28□□□□□ -0.12
PRPF39-202ENST00000424478 GOLGA7BQ2TAP0 167 aa14.28□□□□□ -0.12
PRPF39-202ENST00000424478 NAA35Q5VZE5 725 aa14.28□□□□□ -0.12
PRPF39-202ENST00000424478 METTL23Q86XA0 190 aa14.28□□□□□ -0.12
PRPF39-202ENST00000424478 TDHQ8IZJ6 230 aa14.28□□□□□ -0.12
PRPF39-202ENST00000424478 C1orf131Q8NDD1 294 aaKnown RBP14.28□□□□□ -0.12
PRPF39-202ENST00000424478 CLP1Q92989 425 aaKnown RBP14.28□□□□□ -0.12
PRPF39-202ENST00000424478 ZNF518BQ9C0D4 1074 aa14.28□□□□□ -0.12
PRPF39-202ENST00000424478 M0QYV0 167 aa14.28□□□□□ -0.12
PRPF39-202ENST00000424478 TRAPPC3O43617 180 aa14.28□□□□□ -0.12
PRPF39-202ENST00000424478 FGFR3P22607 806 aa14.28□□□□□ -0.12
PRPF39-202ENST00000424478 MLLT1Q03111 559 aaPredicted RBP14.28□□□□□ -0.12
PRPF39-202ENST00000424478 ATAD1Q8NBU5 361 aa14.28□□□□□ -0.12
PRPF39-202ENST00000424478 KCNK16Q96T55 309 aa14.28□□□□□ -0.12
PRPF39-202ENST00000424478 SYT11Q9BT88 431 aa14.28□□□□□ -0.12
PRPF39-202ENST00000424478 MED10Q9BTT4 135 aa14.28□□□□□ -0.12
PRPF39-202ENST00000424478 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.28□□□□□ -0.12
PRPF39-202ENST00000424478 SLC27A5Q9Y2P5 690 aa14.28□□□□□ -0.12
PRPF39-202ENST00000424478 RCCD1A6NED2 376 aa14.28□□□□□ -0.12
PRPF39-202ENST00000424478 MICAL2O94851 1124 aa14.28□□□□□ -0.12
PRPF39-202ENST00000424478 ABCB4P21439 1286 aa14.28□□□□□ -0.12
PRPF39-202ENST00000424478 TNFAIP3P21580 790 aa14.28□□□□□ -0.12
PRPF39-202ENST00000424478 BMPR1AP36894 532 aa14.28□□□□□ -0.12
PRPF39-202ENST00000424478 PLPP4Q5VZY2 271 aa14.28□□□□□ -0.12
PRPF39-202ENST00000424478 PAQR9Q6ZVX9 377 aa14.28□□□□□ -0.12
PRPF39-202ENST00000424478 TTC30AQ86WT1 665 aa14.28□□□□□ -0.12
PRPF39-202ENST00000424478 GDPD5Q8WTR4 605 aa14.28□□□□□ -0.12
PRPF39-202ENST00000424478 MYLPFQ96A32 169 aa14.28□□□□□ -0.12
PRPF39-202ENST00000424478 CRISPLD1Q9H336 500 aa14.28□□□□□ -0.12
PRPF39-202ENST00000424478 ABI2Q9NYB9 513 aaPredicted RBP14.28□□□□□ -0.12
PRPF39-202ENST00000424478 HIDE1A8MVS5 230 aa14.27□□□□□ -0.12
PRPF39-202ENST00000424478 O00370 1275 aa14.27□□□□□ -0.12
PRPF39-202ENST00000424478 GJB6O95452 261 aa14.27□□□□□ -0.12
PRPF39-202ENST00000424478 CPB1P15086 417 aa14.27□□□□□ -0.12
PRPF39-202ENST00000424478 BDNFP23560 247 aa14.27□□□□□ -0.12
PRPF39-202ENST00000424478 OR1D2P34982 312 aa14.27□□□□□ -0.12
PRPF39-202ENST00000424478 GPR15P49685 360 aa14.27□□□□□ -0.12
PRPF39-202ENST00000424478 SGO2Q562F6 1265 aa14.27□□□□□ -0.12
PRPF39-202ENST00000424478 FUKQ8N0W3 1084 aa14.27□□□□□ -0.12
PRPF39-202ENST00000424478 B3GNT5Q9BYG0 378 aa14.27□□□□□ -0.12
PRPF39-202ENST00000424478 COLQQ9Y215 455 aaPredicted RBP14.27□□□□□ -0.12
PRPF39-202ENST00000424478 NDUFA10O95299 355 aa14.27□□□□□ -0.13
PRPF39-202ENST00000424478 CYP11A1P05108 521 aa14.27□□□□□ -0.13
PRPF39-202ENST00000424478 PRKCIP41743 596 aa14.27□□□□□ -0.13
PRPF39-202ENST00000424478 RGS19P49795 217 aa14.27□□□□□ -0.13
PRPF39-202ENST00000424478 CDR2Q01850 454 aa14.27□□□□□ -0.13
PRPF39-202ENST00000424478 ASTE1Q2TB18 679 aaPredicted RBP14.27□□□□□ -0.13
PRPF39-202ENST00000424478 PPP2R2DQ66LE6 453 aa14.27□□□□□ -0.13
PRPF39-202ENST00000424478 TMC7Q7Z402 723 aa14.27□□□□□ -0.13
PRPF39-202ENST00000424478 WDTC1Q8N5D0 677 aa14.27□□□□□ -0.13
PRPF39-202ENST00000424478 POF1BQ8WVV4 589 aa14.27□□□□□ -0.13
PRPF39-202ENST00000424478 SYN2Q92777 582 aaPredicted RBP14.27□□□□□ -0.13
PRPF39-202ENST00000424478 MYO6Q9UM54 1294 aa14.27□□□□□ -0.13
PRPF39-202ENST00000424478 EPN1Q9Y6I3 576 aaPredicted RBP14.27□□□□□ -0.13
PRPF39-202ENST00000424478 DUSP10Q9Y6W6 482 aa14.27□□□□□ -0.13
PRPF39-202ENST00000424478 CYP2F1P24903 491 aa14.26□□□□□ -0.13
PRPF39-202ENST00000424478 YWHAEP62258 255 aaKnown RBP14.26□□□□□ -0.13
PRPF39-202ENST00000424478 IFRD2Q12894 506 aaPredicted RBP14.26□□□□□ -0.13
PRPF39-202ENST00000424478 PSMD5Q16401 504 aa14.26□□□□□ -0.13
PRPF39-202ENST00000424478 USP41Q3LFD5 358 aa14.26□□□□□ -0.13
PRPF39-202ENST00000424478 CYP4A22Q5TCH4 519 aa14.26□□□□□ -0.13
PRPF39-202ENST00000424478 RNF19BQ6ZMZ0 732 aa14.26□□□□□ -0.13
PRPF39-202ENST00000424478 TMEM86AQ8N2M4 240 aa14.26□□□□□ -0.13
PRPF39-202ENST00000424478 FEZF2Q8TBJ5 459 aa14.26□□□□□ -0.13
PRPF39-202ENST00000424478 MICAL1Q8TDZ2 1067 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms