RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 GUF1Q8N442 669 aaKnown RBP23.47■■□□□ 1.35
TRAF4-204ENST00000422344 GPR88Q9GZN0 384 aa23.47■■□□□ 1.35
TRAF4-204ENST00000422344 SLC2A4RGQ9NR83 387 aa23.47■■□□□ 1.35
TRAF4-204ENST00000422344 A0A1W2PRU2 124 aa23.46■■□□□ 1.35
TRAF4-204ENST00000422344 FRYLO94915 3013 aa23.46■■□□□ 1.35
TRAF4-204ENST00000422344 SMC2O95347 1197 aa23.46■■□□□ 1.35
TRAF4-204ENST00000422344 CST3P01034 146 aaPredicted RBP23.46■■□□□ 1.35
TRAF4-204ENST00000422344 TEAD2Q15562 447 aa23.46■■□□□ 1.35
TRAF4-204ENST00000422344 TMC8Q8IU68 726 aa23.46■■□□□ 1.35
TRAF4-204ENST00000422344 PARD3BQ8TEW8 1205 aa23.46■■□□□ 1.35
TRAF4-204ENST00000422344 ZNF516Q92618 1163 aa23.46■■□□□ 1.35
TRAF4-204ENST00000422344 SYAP1Q96A49 352 aaPredicted RBP23.46■■□□□ 1.35
TRAF4-204ENST00000422344 GCNAQ96QF7 691 aa23.46■■□□□ 1.35
TRAF4-204ENST00000422344 LPIN3Q9BQK8 851 aa23.46■■□□□ 1.35
TRAF4-204ENST00000422344 PI4K2AQ9BTU6 479 aa23.46■■□□□ 1.35
TRAF4-204ENST00000422344 GZF1Q9H116 711 aaPredicted RBP23.46■■□□□ 1.35
TRAF4-204ENST00000422344 ZFP14Q9HCL3 533 aa23.46■■□□□ 1.35
TRAF4-204ENST00000422344 TMLHEQ9NVH6 421 aa23.46■■□□□ 1.35
TRAF4-204ENST00000422344 DMXL1Q9Y485 3027 aa23.45■■□□□ 1.34
TRAF4-204ENST00000422344 LRRIQ3A6PVS8 624 aaPredicted RBP23.45■■□□□ 1.34
TRAF4-204ENST00000422344 GABRDO14764 452 aa23.45■■□□□ 1.34
TRAF4-204ENST00000422344 DCNP07585 359 aaKnown RBP23.45■■□□□ 1.34
TRAF4-204ENST00000422344 ATF6P18850 670 aa23.45■■□□□ 1.34
TRAF4-204ENST00000422344 NR2F2P24468 414 aa23.45■■□□□ 1.34
TRAF4-204ENST00000422344 RPL13P26373 211 aaKnown RBP23.45■■□□□ 1.34
TRAF4-204ENST00000422344 ATICP31939 592 aa23.45■■□□□ 1.34
TRAF4-204ENST00000422344 GPC5P78333 572 aa23.45■■□□□ 1.34
TRAF4-204ENST00000422344 SNW1Q13573 536 aaKnown RBP23.45■■□□□ 1.34
TRAF4-204ENST00000422344 WDR72Q3MJ13 1102 aa23.45■■□□□ 1.34
TRAF4-204ENST00000422344 FAM78AQ5JUQ0 283 aa23.45■■□□□ 1.34
TRAF4-204ENST00000422344 ERMP1Q7Z2K6 904 aa23.45■■□□□ 1.34
TRAF4-204ENST00000422344 SPATA2LQ8IUW3 424 aaPredicted RBP23.45■■□□□ 1.34
TRAF4-204ENST00000422344 ENGASEQ8NFI3 743 aa23.45■■□□□ 1.34
TRAF4-204ENST00000422344 SHKBP1Q8TBC3 707 aa23.45■■□□□ 1.34
TRAF4-204ENST00000422344 PLEKHO2Q8TD55 490 aa23.45■■□□□ 1.34
TRAF4-204ENST00000422344 GIPC2Q8TF65 315 aa23.45■■□□□ 1.34
TRAF4-204ENST00000422344 ELSPBP1Q96BH3 223 aa23.45■■□□□ 1.34
TRAF4-204ENST00000422344 SYT15Q9BQS2 421 aa23.45■■□□□ 1.34
TRAF4-204ENST00000422344 LRRC3Q9BY71 257 aa23.45■■□□□ 1.34
TRAF4-204ENST00000422344 SNX25Q9H3E2 840 aa23.45■■□□□ 1.34
TRAF4-204ENST00000422344 ABCB6Q9NP58 842 aa23.45■■□□□ 1.34
TRAF4-204ENST00000422344 GTF3C4Q9UKN8 822 aa23.45■■□□□ 1.34
TRAF4-204ENST00000422344 R4GN57 208 aa23.45■■□□□ 1.34
TRAF4-204ENST00000422344 MOSPD3O75425 235 aa23.44■■□□□ 1.34
TRAF4-204ENST00000422344 LMNAP02545 664 aaKnown RBP23.44■■□□□ 1.34
TRAF4-204ENST00000422344 WARSP23381 471 aaKnown RBP23.44■■□□□ 1.34
TRAF4-204ENST00000422344 MYL6P60660 151 aa23.44■■□□□ 1.34
TRAF4-204ENST00000422344 RPL10AP62906 217 aaKnown RBP23.44■■□□□ 1.34
TRAF4-204ENST00000422344 PFKPQ01813 784 aa23.44■■□□□ 1.34
TRAF4-204ENST00000422344 ARHGAP15Q53QZ3 475 aa23.44■■□□□ 1.34
TRAF4-204ENST00000422344 ZSCAN18Q8TBC5 510 aaPredicted RBP23.44■■□□□ 1.34
TRAF4-204ENST00000422344 TMC2Q8TDI7 906 aa23.44■■□□□ 1.34
TRAF4-204ENST00000422344 KBTBD7Q8WVZ9 684 aa23.44■■□□□ 1.34
TRAF4-204ENST00000422344 SMARCD2Q92925 531 aa23.44■■□□□ 1.34
TRAF4-204ENST00000422344 TIGD1Q96MW7 591 aa23.44■■□□□ 1.34
TRAF4-204ENST00000422344 ASB16Q96NS5 453 aa23.44■■□□□ 1.34
TRAF4-204ENST00000422344 ATXN3LQ9H3M9 355 aa23.44■■□□□ 1.34
TRAF4-204ENST00000422344 ARHGEF3Q9NR81 526 aa23.44■■□□□ 1.34
TRAF4-204ENST00000422344 NXF1Q9UBU9 619 aaKnown RBP23.44■■□□□ 1.34
TRAF4-204ENST00000422344 CDH9Q9ULB4 789 aa23.44■■□□□ 1.34
TRAF4-204ENST00000422344 HCRTO43612 131 aa23.43■■□□□ 1.34
TRAF4-204ENST00000422344 STAU1O95793 577 aaKnown RBP23.43■■□□□ 1.34
TRAF4-204ENST00000422344 GABRR2P28476 465 aa23.43■■□□□ 1.34
TRAF4-204ENST00000422344 CLDN10P78369 228 aa23.43■■□□□ 1.34
TRAF4-204ENST00000422344 MAPRE1Q15691 268 aaKnown RBP23.43■■□□□ 1.34
TRAF4-204ENST00000422344 NFIL3Q16649 462 aa23.43■■□□□ 1.34
TRAF4-204ENST00000422344 ZNF699Q32M78 642 aa23.43■■□□□ 1.34
TRAF4-204ENST00000422344 TDRD10Q5VZ19 366 aaKnown RBP23.43■■□□□ 1.34
TRAF4-204ENST00000422344 TANGO2Q6ICL3 276 aa23.43■■□□□ 1.34
TRAF4-204ENST00000422344 PHLDB3Q6NSJ2 640 aa23.43■■□□□ 1.34
TRAF4-204ENST00000422344 C4orf50Q6ZRC1 276 aa23.43■■□□□ 1.34
TRAF4-204ENST00000422344 LIMS2Q7Z4I7 341 aa23.43■■□□□ 1.34
TRAF4-204ENST00000422344 SMARCE1Q969G3 411 aa23.43■■□□□ 1.34
TRAF4-204ENST00000422344 ZSWIM3Q96MP5 696 aa23.43■■□□□ 1.34
TRAF4-204ENST00000422344 GSDMAQ96QA5 445 aa23.43■■□□□ 1.34
TRAF4-204ENST00000422344 SEMA4AQ9H3S1 761 aa23.43■■□□□ 1.34
TRAF4-204ENST00000422344 ZNF334Q9HCZ1 680 aaPredicted RBP23.43■■□□□ 1.34
TRAF4-204ENST00000422344 SIT1Q9Y3P8 196 aa23.43■■□□□ 1.34
TRAF4-204ENST00000422344 CACNA1AO00555 2505 aa23.43■■□□□ 1.34
TRAF4-204ENST00000422344 NRG2O14511 850 aaPredicted RBP23.42■■□□□ 1.34
TRAF4-204ENST00000422344 KINO60870 393 aaKnown RBP23.42■■□□□ 1.34
TRAF4-204ENST00000422344 TACC1O75410 805 aa23.42■■□□□ 1.34
TRAF4-204ENST00000422344 PDGFRBP09619 1106 aa23.42■■□□□ 1.34
TRAF4-204ENST00000422344 KRT13P13646 458 aa23.42■■□□□ 1.34
TRAF4-204ENST00000422344 CDC25CP30307 473 aa23.42■■□□□ 1.34
TRAF4-204ENST00000422344 PSMC1P62191 440 aaKnown RBP23.42■■□□□ 1.34
TRAF4-204ENST00000422344 ADAM9Q13443 819 aa23.42■■□□□ 1.34
TRAF4-204ENST00000422344 NCOA4Q13772 614 aa23.42■■□□□ 1.34
TRAF4-204ENST00000422344 SMYD4Q8IYR2 804 aaPredicted RBP23.42■■□□□ 1.34
TRAF4-204ENST00000422344 OR6B3Q8NGW1 331 aa23.42■■□□□ 1.34
TRAF4-204ENST00000422344 FUBP3Q96I24 572 aaKnown RBP eCLIP23.42■■□□□ 1.34
TRAF4-204ENST00000422344 SHDQ96IW2 340 aa23.42■■□□□ 1.34
TRAF4-204ENST00000422344 PKMYT1Q99640 499 aa23.42■■□□□ 1.34
TRAF4-204ENST00000422344 MRPL45Q9BRJ2 306 aaKnown RBP23.42■■□□□ 1.34
TRAF4-204ENST00000422344 CACNA1IQ9P0X4 2223 aa23.41■■□□□ 1.34
TRAF4-204ENST00000422344 MYBPHLA2RUH7 354 aa23.41■■□□□ 1.34
TRAF4-204ENST00000422344 MAPK13O15264 365 aa23.41■■□□□ 1.34
TRAF4-204ENST00000422344 C4BPAP04003 597 aaKnown RBP23.41■■□□□ 1.34
TRAF4-204ENST00000422344 FAM163BP0C2L3 166 aa23.41■■□□□ 1.34
TRAF4-204ENST00000422344 FCARP24071 287 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms