RNA–Protein interactions for RNA: ENST00000422252.1

SMDT1-202, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 2

Gene SMDT1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-202ENST00000422252 SOWAHAQ2M3V2 549 aa27.38■■□□□ 1.97
SMDT1-202ENST00000422252 DPH6Q7L8W6 267 aa27.38■■□□□ 1.97
SMDT1-202ENST00000422252 XXYLT1Q8NBI6 393 aa27.38■■□□□ 1.97
SMDT1-202ENST00000422252 CLDN23Q96B33 292 aa27.38■■□□□ 1.97
SMDT1-202ENST00000422252 FNBP1Q96RU3 617 aa27.38■■□□□ 1.97
SMDT1-202ENST00000422252 PKMYT1Q99640 499 aa27.38■■□□□ 1.97
SMDT1-202ENST00000422252 TASP1Q9H6P5 420 aa27.38■■□□□ 1.97
SMDT1-202ENST00000422252 ABCB6Q9NP58 842 aa27.38■■□□□ 1.97
SMDT1-202ENST00000422252 SPATA6Q9NWH7 488 aaPredicted RBP27.38■■□□□ 1.97
SMDT1-202ENST00000422252 CGNQ9P2M7 1197 aaKnown RBP27.38■■□□□ 1.97
SMDT1-202ENST00000422252 DPYSL4O14531 572 aa27.37■■□□□ 1.97
SMDT1-202ENST00000422252 COL4A2P08572 1712 aa27.37■■□□□ 1.97
SMDT1-202ENST00000422252 SP9P0CG40 484 aa27.37■■□□□ 1.97
SMDT1-202ENST00000422252 DLATP10515 647 aaKnown RBP27.37■■□□□ 1.97
SMDT1-202ENST00000422252 PCSK1P29120 753 aa27.37■■□□□ 1.97
SMDT1-202ENST00000422252 CYP24A1Q07973 514 aa27.37■■□□□ 1.97
SMDT1-202ENST00000422252 FCHO2Q0JRZ9 810 aa27.37■■□□□ 1.97
SMDT1-202ENST00000422252 KNOP1Q1ED39 458 aaKnown RBP27.37■■□□□ 1.97
SMDT1-202ENST00000422252 GPIHBP1Q8IV16 184 aa27.37■■□□□ 1.97
SMDT1-202ENST00000422252 PAGE5Q96GU1 130 aa27.37■■□□□ 1.97
SMDT1-202ENST00000422252 GTF3C4Q9UKN8 822 aa27.37■■□□□ 1.97
SMDT1-202ENST00000422252 ZDHHC9Q9Y397 364 aa27.37■■□□□ 1.97
SMDT1-202ENST00000422252 PIAS3Q9Y6X2 628 aa27.37■■□□□ 1.97
SMDT1-202ENST00000422252 VPS13AQ96RL7 3174 aa27.37■■□□□ 1.97
SMDT1-202ENST00000422252 ARNTLO00327 626 aa27.36■■□□□ 1.97
SMDT1-202ENST00000422252 CHADO15335 359 aa27.36■■□□□ 1.97
SMDT1-202ENST00000422252 PFKFB1P16118 471 aa27.36■■□□□ 1.97
SMDT1-202ENST00000422252 TNNI1P19237 187 aa27.36■■□□□ 1.97
SMDT1-202ENST00000422252 CMA1P23946 247 aa27.36■■□□□ 1.97
SMDT1-202ENST00000422252 WEE1P30291 646 aa27.36■■□□□ 1.97
SMDT1-202ENST00000422252 RPS9P46781 194 aaKnown RBP27.36■■□□□ 1.97
SMDT1-202ENST00000422252 GPR15P49685 360 aa27.36■■□□□ 1.97
SMDT1-202ENST00000422252 PSMD6Q15008 389 aa27.36■■□□□ 1.97
SMDT1-202ENST00000422252 TRAPPC11Q7Z392 1133 aa27.36■■□□□ 1.97
SMDT1-202ENST00000422252 LIMS2Q7Z4I7 341 aa27.36■■□□□ 1.97
SMDT1-202ENST00000422252 C12orf56Q8IXR9 622 aa27.36■■□□□ 1.97
SMDT1-202ENST00000422252 SPATA32Q96LK8 384 aa27.36■■□□□ 1.97
SMDT1-202ENST00000422252 CGRRF1Q99675 332 aa27.36■■□□□ 1.97
SMDT1-202ENST00000422252 OBP2AQ9NY56 170 aa27.36■■□□□ 1.97
SMDT1-202ENST00000422252 A0A1B0GVL5 298 aa27.35■■□□□ 1.97
SMDT1-202ENST00000422252 HCRTO43612 131 aa27.35■■□□□ 1.97
SMDT1-202ENST00000422252 KLRC4O43908 158 aa27.35■■□□□ 1.97
SMDT1-202ENST00000422252 CSH1P0DML2 217 aa27.35■■□□□ 1.97
SMDT1-202ENST00000422252 CSH2P0DML3 217 aa27.35■■□□□ 1.97
SMDT1-202ENST00000422252 HMGA1P17096 107 aaKnown RBP27.35■■□□□ 1.97
SMDT1-202ENST00000422252 KRT85P78386 507 aa27.35■■□□□ 1.97
SMDT1-202ENST00000422252 MAML2Q8IZL2 1156 aaPredicted RBP27.35■■□□□ 1.97
SMDT1-202ENST00000422252 CSGALNACT1Q8TDX6 532 aa27.35■■□□□ 1.97
SMDT1-202ENST00000422252 CCDC127Q96BQ5 260 aa27.35■■□□□ 1.97
SMDT1-202ENST00000422252 ZMYM5Q9UJ78 669 aa27.35■■□□□ 1.97
SMDT1-202ENST00000422252 NDRG2Q9UN36 371 aaKnown RBP27.35■■□□□ 1.97
SMDT1-202ENST00000422252 TICRRQ7Z2Z1 1910 aa27.35■■□□□ 1.97
SMDT1-202ENST00000422252 NUP210Q8TEM1 1887 aaPredicted RBP27.34■■□□□ 1.97
SMDT1-202ENST00000422252 LAMTOR5O43504 91 aa27.34■■□□□ 1.97
SMDT1-202ENST00000422252 CYP2F1P24903 491 aa27.34■■□□□ 1.97
SMDT1-202ENST00000422252 RPL10AP62906 217 aaKnown RBP27.34■■□□□ 1.97
SMDT1-202ENST00000422252 FZD5Q13467 585 aa27.34■■□□□ 1.97
SMDT1-202ENST00000422252 ZC3H14Q6PJT7 736 aaKnown RBP27.34■■□□□ 1.97
SMDT1-202ENST00000422252 SPATA2LQ8IUW3 424 aaPredicted RBP27.34■■□□□ 1.97
SMDT1-202ENST00000422252 ZNF687Q8N1G0 1237 aa27.34■■□□□ 1.97
SMDT1-202ENST00000422252 KBTBD7Q8WVZ9 684 aa27.34■■□□□ 1.97
SMDT1-202ENST00000422252 FAM3CQ92520 227 aa27.34■■□□□ 1.97
SMDT1-202ENST00000422252 LRRC3BQ96PB8 259 aa27.34■■□□□ 1.97
SMDT1-202ENST00000422252 SLC46A2Q9BY10 475 aa27.34■■□□□ 1.97
SMDT1-202ENST00000422252 SEMA4AQ9H3S1 761 aa27.34■■□□□ 1.97
SMDT1-202ENST00000422252 EXOC1Q9NV70 894 aa27.34■■□□□ 1.97
SMDT1-202ENST00000422252 USP25Q9UHP3 1055 aa27.34■■□□□ 1.97
SMDT1-202ENST00000422252 R4GN57 208 aa27.34■■□□□ 1.97
SMDT1-202ENST00000422252 PRAMEF12O95522 483 aa27.33■■□□□ 1.97
SMDT1-202ENST00000422252 MLLT6P55198 1093 aaPredicted RBP27.33■■□□□ 1.97
SMDT1-202ENST00000422252 NLRP12P59046 1061 aa27.33■■□□□ 1.97
SMDT1-202ENST00000422252 DDR2Q16832 855 aa27.33■■□□□ 1.97
SMDT1-202ENST00000422252 CCDC142Q17RM4 750 aa27.33■■□□□ 1.97
SMDT1-202ENST00000422252 CFAP221Q4G0U5 840 aa27.33■■□□□ 1.97
SMDT1-202ENST00000422252 SDHAF4Q5VUM1 108 aa27.33■■□□□ 1.97
SMDT1-202ENST00000422252 TMEM150AQ86TG1 271 aa27.33■■□□□ 1.97
SMDT1-202ENST00000422252 GOLGA5Q8TBA6 731 aa27.33■■□□□ 1.97
SMDT1-202ENST00000422252 FUBP3Q96I24 572 aaKnown RBP eCLIP27.33■■□□□ 1.97
SMDT1-202ENST00000422252 CHAMP1Q96JM3 812 aa27.33■■□□□ 1.97
SMDT1-202ENST00000422252 FBXO4Q9UKT5 387 aa27.33■■□□□ 1.97
SMDT1-202ENST00000422252 MAGED2Q9UNF1 606 aaPredicted RBP27.33■■□□□ 1.97
SMDT1-202ENST00000422252 HPSEQ9Y251 543 aa27.33■■□□□ 1.97
SMDT1-202ENST00000422252 MYBPHLA2RUH7 354 aa27.32■■□□□ 1.96
SMDT1-202ENST00000422252 EXOC3O60645 756 aa27.32■■□□□ 1.96
SMDT1-202ENST00000422252 CST3P01034 146 aaPredicted RBP27.32■■□□□ 1.96
SMDT1-202ENST00000422252 F11P03951 625 aa27.32■■□□□ 1.96
SMDT1-202ENST00000422252 DDX6P26196 483 aaKnown RBP eCLIP27.32■■□□□ 1.96
SMDT1-202ENST00000422252 STK4Q13043 487 aa27.32■■□□□ 1.96
SMDT1-202ENST00000422252 PSMD2Q13200 908 aa27.32■■□□□ 1.96
SMDT1-202ENST00000422252 ZNF528Q3MIS6 628 aa27.32■■□□□ 1.96
SMDT1-202ENST00000422252 KMT5BQ4FZB7 885 aa27.32■■□□□ 1.96
SMDT1-202ENST00000422252 ARHGAP29Q52LW3 1261 aa27.32■■□□□ 1.96
SMDT1-202ENST00000422252 FAM171BQ6P995 826 aa27.32■■□□□ 1.96
SMDT1-202ENST00000422252 CMTM8Q8IZV2 173 aa27.32■■□□□ 1.96
SMDT1-202ENST00000422252 KIAA0895Q8NCT3 520 aa27.32■■□□□ 1.96
SMDT1-202ENST00000422252 STKLD1Q8NE28 680 aa27.32■■□□□ 1.96
SMDT1-202ENST00000422252 MSANTD3Q96H12 275 aa27.32■■□□□ 1.96
SMDT1-202ENST00000422252 MMS19Q96T76 1030 aa27.32■■□□□ 1.96
SMDT1-202ENST00000422252 SYT15Q9BQS2 421 aa27.32■■□□□ 1.96
SMDT1-202ENST00000422252 CDH9Q9ULB4 789 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms