RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 CNPP09543 421 aaKnown RBP16.72■□□□□ 0.27
DDX55-203ENST00000421670 CLCN1P35523 988 aa16.72■□□□□ 0.27
DDX55-203ENST00000421670 STAT1P42224 750 aa16.72■□□□□ 0.27
DDX55-203ENST00000421670 TSPY1Q01534 308 aa16.72■□□□□ 0.27
DDX55-203ENST00000421670 ROR1Q01973 937 aa16.72■□□□□ 0.27
DDX55-203ENST00000421670 GRIN2CQ14957 1233 aa16.72■□□□□ 0.27
DDX55-203ENST00000421670 SLC39A12Q504Y0 691 aa16.72■□□□□ 0.27
DDX55-203ENST00000421670 MDH1BQ5I0G3 518 aa16.72■□□□□ 0.27
DDX55-203ENST00000421670 ZNF697Q5TEC3 545 aa16.72■□□□□ 0.27
DDX55-203ENST00000421670 LRRTM3Q86VH5 581 aa16.72■□□□□ 0.27
DDX55-203ENST00000421670 SLC47A2Q86VL8 602 aa16.72■□□□□ 0.27
DDX55-203ENST00000421670 MRPL43Q8N983 215 aaKnown RBP16.72■□□□□ 0.27
DDX55-203ENST00000421670 TNIP3Q96KP6 325 aa16.72■□□□□ 0.27
DDX55-203ENST00000421670 PKMYT1Q99640 499 aa16.72■□□□□ 0.27
DDX55-203ENST00000421670 EDEM3Q9BZQ6 932 aa16.72■□□□□ 0.27
DDX55-203ENST00000421670 ZCWPW1Q9H0M4 648 aa16.72■□□□□ 0.27
DDX55-203ENST00000421670 LMAN2LQ9H0V9 348 aa16.72■□□□□ 0.27
DDX55-203ENST00000421670 NGRNQ9NPE2 291 aaKnown RBP16.72■□□□□ 0.27
DDX55-203ENST00000421670 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.72■□□□□ 0.27
DDX55-203ENST00000421670 TMLHEQ9NVH6 421 aa16.72■□□□□ 0.27
DDX55-203ENST00000421670 GTF3C4Q9UKN8 822 aa16.72■□□□□ 0.27
DDX55-203ENST00000421670 SSX2IPQ9Y2D8 614 aa16.72■□□□□ 0.27
DDX55-203ENST00000421670 LUC7L2Q9Y383 392 aaKnown RBP16.72■□□□□ 0.27
DDX55-203ENST00000421670 IRAK3Q9Y616 596 aa16.72■□□□□ 0.27
DDX55-203ENST00000421670 WDR27A2RRH5 827 aa16.72■□□□□ 0.27
DDX55-203ENST00000421670 MFAP3LO75121 409 aa16.72■□□□□ 0.27
DDX55-203ENST00000421670 TPM1P09493 284 aa16.72■□□□□ 0.27
DDX55-203ENST00000421670 CCDC130P13994 396 aa16.72■□□□□ 0.27
DDX55-203ENST00000421670 CD19P15391 556 aa16.72■□□□□ 0.27
DDX55-203ENST00000421670 PTPN1P18031 435 aaKnown RBP16.72■□□□□ 0.27
DDX55-203ENST00000421670 GNA15P30679 374 aa16.72■□□□□ 0.27
DDX55-203ENST00000421670 KRT9P35527 623 aa16.72■□□□□ 0.27
DDX55-203ENST00000421670 NDUFV1P49821 464 aa16.72■□□□□ 0.27
DDX55-203ENST00000421670 ADKP55263 362 aaKnown RBP16.72■□□□□ 0.27
DDX55-203ENST00000421670 ZBED6P86452 979 aa16.72■□□□□ 0.27
DDX55-203ENST00000421670 BMS1Q14692 1282 aaKnown RBP16.72■□□□□ 0.27
DDX55-203ENST00000421670 HABP4Q5JVS0 413 aaKnown RBP16.72■□□□□ 0.27
DDX55-203ENST00000421670 SLC8B1Q6J4K2 584 aa16.72■□□□□ 0.27
DDX55-203ENST00000421670 ZNF397Q8NF99 534 aaPredicted RBP16.72■□□□□ 0.27
DDX55-203ENST00000421670 HEXIM2Q96MH2 286 aaKnown RBP16.72■□□□□ 0.27
DDX55-203ENST00000421670 PGLYRP2Q96PD5 576 aa16.72■□□□□ 0.27
DDX55-203ENST00000421670 RXFP1Q9HBX9 757 aa16.72■□□□□ 0.27
DDX55-203ENST00000421670 FNIP2Q9P278 1114 aa16.72■□□□□ 0.27
DDX55-203ENST00000421670 PRUNE2Q8WUY3 3088 aa16.71■□□□□ 0.27
DDX55-203ENST00000421670 PAEPP09466 180 aa16.71■□□□□ 0.27
DDX55-203ENST00000421670 BRD2P25440 801 aaKnown RBP16.71■□□□□ 0.27
DDX55-203ENST00000421670 CREMQ03060 361 aa16.71■□□□□ 0.27
DDX55-203ENST00000421670 ADGRD2Q7Z7M1 963 aa16.71■□□□□ 0.27
DDX55-203ENST00000421670 GPR65Q8IYL9 337 aa16.71■□□□□ 0.27
DDX55-203ENST00000421670 CRYBG2Q8N1P7 616 aa16.71■□□□□ 0.27
DDX55-203ENST00000421670 MYLPFQ96A32 169 aa16.71■□□□□ 0.27
DDX55-203ENST00000421670 MRPL38Q96DV4 380 aaKnown RBP16.71■□□□□ 0.27
DDX55-203ENST00000421670 PCED1BQ96HM7 432 aa16.71■□□□□ 0.27
DDX55-203ENST00000421670 OXCT2Q9BYC2 517 aaPredicted RBP16.71■□□□□ 0.27
DDX55-203ENST00000421670 RHOBTB2Q9BYZ6 727 aa16.71■□□□□ 0.27
DDX55-203ENST00000421670 MYO6Q9UM54 1294 aa16.71■□□□□ 0.27
DDX55-203ENST00000421670 C5orf42Q9H799 3197 aa16.7■□□□□ 0.26
DDX55-203ENST00000421670 SSTR3P32745 418 aaPredicted RBP16.7■□□□□ 0.26
DDX55-203ENST00000421670 CYP27A1Q02318 531 aa16.7■□□□□ 0.26
DDX55-203ENST00000421670 PTPROQ16827 1216 aa16.7■□□□□ 0.26
DDX55-203ENST00000421670 SFMBT2Q5VUG0 894 aa16.7■□□□□ 0.26
DDX55-203ENST00000421670 FAM171BQ6P995 826 aa16.7■□□□□ 0.26
DDX55-203ENST00000421670 RNF19BQ6ZMZ0 732 aa16.7■□□□□ 0.26
DDX55-203ENST00000421670 RBM23Q86U06 439 aaKnown RBP16.7■□□□□ 0.26
DDX55-203ENST00000421670 PALB2Q86YC2 1186 aa16.7■□□□□ 0.26
DDX55-203ENST00000421670 MYCBPAPQ8TBZ2 947 aa16.7■□□□□ 0.26
DDX55-203ENST00000421670 EPS8L1Q8TE68 723 aa16.7■□□□□ 0.26
DDX55-203ENST00000421670 TFAP2BQ92481 460 aa16.7■□□□□ 0.26
DDX55-203ENST00000421670 KLHL5Q96PQ7 755 aa16.7■□□□□ 0.26
DDX55-203ENST00000421670 ZSWIM1Q9BR11 485 aa16.7■□□□□ 0.26
DDX55-203ENST00000421670 EMILIN2Q9BXX0 1053 aa16.7■□□□□ 0.26
DDX55-203ENST00000421670 ABHD10Q9NUJ1 306 aa16.7■□□□□ 0.26
DDX55-203ENST00000421670 MYO16Q9Y6X6 1858 aa16.7■□□□□ 0.26
DDX55-203ENST00000421670 AKR1B15C9JRZ8 316 aaPredicted RBP16.69■□□□□ 0.26
DDX55-203ENST00000421670 CLDN5O00501 218 aa16.69■□□□□ 0.26
DDX55-203ENST00000421670 PER2O15055 1255 aa16.69■□□□□ 0.26
DDX55-203ENST00000421670 THAP12O43422 761 aa16.69■□□□□ 0.26
DDX55-203ENST00000421670 VNN2O95498 520 aa16.69■□□□□ 0.26
DDX55-203ENST00000421670 ADH1AP07327 375 aa16.69■□□□□ 0.26
DDX55-203ENST00000421670 PDE6CP51160 858 aa16.69■□□□□ 0.26
DDX55-203ENST00000421670 GPR17Q13304 367 aa16.69■□□□□ 0.26
DDX55-203ENST00000421670 ASIC2Q16515 512 aa16.69■□□□□ 0.26
DDX55-203ENST00000421670 SGO2Q562F6 1265 aa16.69■□□□□ 0.26
DDX55-203ENST00000421670 PPP1R26Q5T8A7 1209 aaPredicted RBP16.69■□□□□ 0.26
DDX55-203ENST00000421670 PDE12Q6L8Q7 609 aaKnown RBP16.69■□□□□ 0.26
DDX55-203ENST00000421670 Q7L0L9 218 aa16.69■□□□□ 0.26
DDX55-203ENST00000421670 NOP9Q86U38 636 aaKnown RBP16.69■□□□□ 0.26
DDX55-203ENST00000421670 CNGA4Q8IV77 575 aa16.69■□□□□ 0.26
DDX55-203ENST00000421670 DCP1BQ8IZD4 617 aaKnown RBP16.69■□□□□ 0.26
DDX55-203ENST00000421670 TC2NQ8N9U0 490 aa16.69■□□□□ 0.26
DDX55-203ENST00000421670 SLC2A14Q8TDB8 520 aa16.69■□□□□ 0.26
DDX55-203ENST00000421670 ANP32BQ92688 251 aaKnown RBP16.69■□□□□ 0.26
DDX55-203ENST00000421670 B3GNT5Q9BYG0 378 aa16.69■□□□□ 0.26
DDX55-203ENST00000421670 ABI2Q9NYB9 513 aaPredicted RBP16.69■□□□□ 0.26
DDX55-203ENST00000421670 GREB1Q4ZG55 1949 aa16.69■□□□□ 0.26
DDX55-203ENST00000421670 MTMR11A4FU01 709 aa16.68■□□□□ 0.26
DDX55-203ENST00000421670 VDRP11473 427 aa16.68■□□□□ 0.26
DDX55-203ENST00000421670 CYP11B1P15538 503 aa16.68■□□□□ 0.26
DDX55-203ENST00000421670 FERP16591 822 aa16.68■□□□□ 0.26
DDX55-203ENST00000421670 KLRC2P26717 231 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms