RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 MYL7Q01449 175 aa18.67■□□□□ 0.58
MSH6-203ENST00000420813 DGKKQ5KSL6 1271 aa18.67■□□□□ 0.58
MSH6-203ENST00000420813 GPIHBP1Q8IV16 184 aa18.67■□□□□ 0.58
MSH6-203ENST00000420813 SPEM1Q8N4L4 309 aa18.67■□□□□ 0.58
MSH6-203ENST00000420813 CSGALNACT2Q8N6G5 542 aa18.67■□□□□ 0.58
MSH6-203ENST00000420813 GPR161Q8N6U8 529 aaKnown RBP18.67■□□□□ 0.58
MSH6-203ENST00000420813 CELF5Q8N6W0 485 aaKnown RBP18.67■□□□□ 0.58
MSH6-203ENST00000420813 SECISBP2LQ93073 1101 aaKnown RBP18.67■□□□□ 0.58
MSH6-203ENST00000420813 SLC46A2Q9BY10 475 aa18.67■□□□□ 0.58
MSH6-203ENST00000420813 PDE11AQ9HCR9 933 aa18.67■□□□□ 0.58
MSH6-203ENST00000420813 TMLHEQ9NVH6 421 aa18.67■□□□□ 0.58
MSH6-203ENST00000420813 KBTBD4Q9NVX7 518 aa18.67■□□□□ 0.58
MSH6-203ENST00000420813 THG1LQ9NWX6 298 aaKnown RBP18.67■□□□□ 0.58
MSH6-203ENST00000420813 DDX43Q9NXZ2 648 aaKnown RBP18.67■□□□□ 0.58
MSH6-203ENST00000420813 RALGAPA1Q6GYQ0 2036 aa18.67■□□□□ 0.58
MSH6-203ENST00000420813 SPTLC2O15270 562 aa18.66■□□□□ 0.58
MSH6-203ENST00000420813 PAPSS2O95340 614 aaPredicted RBP18.66■□□□□ 0.58
MSH6-203ENST00000420813 F11P03951 625 aa18.66■□□□□ 0.58
MSH6-203ENST00000420813 TMEM191BP0C7N4 346 aa18.66■□□□□ 0.58
MSH6-203ENST00000420813 CXCL12P48061 93 aa18.66■□□□□ 0.58
MSH6-203ENST00000420813 SOX9P48436 509 aa18.66■□□□□ 0.58
MSH6-203ENST00000420813 CDR1P51861 262 aa18.66■□□□□ 0.58
MSH6-203ENST00000420813 NLRP12P59046 1061 aa18.66■□□□□ 0.58
MSH6-203ENST00000420813 BFSP1Q12934 665 aa18.66■□□□□ 0.58
MSH6-203ENST00000420813 GAS6Q14393 721 aa18.66■□□□□ 0.58
MSH6-203ENST00000420813 SURF1Q15526 300 aa18.66■□□□□ 0.58
MSH6-203ENST00000420813 E2F4Q16254 413 aa18.66■□□□□ 0.58
MSH6-203ENST00000420813 INTS6LQ5JSJ4 861 aaKnown RBP18.66■□□□□ 0.58
MSH6-203ENST00000420813 TMEM150AQ86TG1 271 aa18.66■□□□□ 0.58
MSH6-203ENST00000420813 CMTM8Q8IZV2 173 aa18.66■□□□□ 0.58
MSH6-203ENST00000420813 TOP6BLQ8N6T0 577 aa18.66■□□□□ 0.58
MSH6-203ENST00000420813 RMDN1Q96DB5 314 aa18.66■□□□□ 0.58
MSH6-203ENST00000420813 ZFYVE19Q96K21 471 aa18.66■□□□□ 0.58
MSH6-203ENST00000420813 PKMYT1Q99640 499 aa18.66■□□□□ 0.58
MSH6-203ENST00000420813 PCIF1Q9H4Z3 704 aa18.66■□□□□ 0.58
MSH6-203ENST00000420813 FOXD4L1Q9NU39 408 aa18.66■□□□□ 0.58
MSH6-203ENST00000420813 GTSE1Q9NYZ3 720 aa18.66■□□□□ 0.58
MSH6-203ENST00000420813 HELZP42694 1942 aaKnown RBP18.66■□□□□ 0.58
MSH6-203ENST00000420813 PRPF40AO75400 957 aaKnown RBP18.65■□□□□ 0.58
MSH6-203ENST00000420813 YEATS4O95619 227 aa18.65■□□□□ 0.58
MSH6-203ENST00000420813 KRT19P08727 400 aa18.65■□□□□ 0.58
MSH6-203ENST00000420813 LHX1P48742 406 aa18.65■□□□□ 0.58
MSH6-203ENST00000420813 RPL10AP62906 217 aaKnown RBP18.65■□□□□ 0.58
MSH6-203ENST00000420813 AMPD3Q01432 767 aa18.65■□□□□ 0.58
MSH6-203ENST00000420813 CNNM4Q6P4Q7 775 aa18.65■□□□□ 0.58
MSH6-203ENST00000420813 TXNDC11Q6PKC3 985 aa18.65■□□□□ 0.58
MSH6-203ENST00000420813 ANKRD36BP1Q96IX9 119 aa18.65■□□□□ 0.58
MSH6-203ENST00000420813 ZNF396Q96N95 335 aaPredicted RBP18.65■□□□□ 0.58
MSH6-203ENST00000420813 PI4K2AQ9BTU6 479 aa18.65■□□□□ 0.58
MSH6-203ENST00000420813 TRIM9Q9C026 710 aa18.65■□□□□ 0.58
MSH6-203ENST00000420813 MTMR12Q9C0I1 747 aa18.65■□□□□ 0.58
MSH6-203ENST00000420813 KIF9Q9HAQ2 790 aa18.65■□□□□ 0.58
MSH6-203ENST00000420813 INTS13Q9NVM9 706 aa18.65■□□□□ 0.58
MSH6-203ENST00000420813 UXTQ9UBK9 157 aaPredicted RBP18.65■□□□□ 0.58
MSH6-203ENST00000420813 SIX4Q9UIU6 781 aa18.65■□□□□ 0.58
MSH6-203ENST00000420813 SNX9Q9Y5X1 595 aa18.65■□□□□ 0.58
MSH6-203ENST00000420813 SPAG17Q6Q759 2223 aa18.65■□□□□ 0.58
MSH6-203ENST00000420813 ATG2BQ96BY7 2078 aa18.64■□□□□ 0.57
MSH6-203ENST00000420813 ZNF233A6NK53 670 aa18.64■□□□□ 0.57
MSH6-203ENST00000420813 TULP1O00294 542 aaPredicted RBP18.64■□□□□ 0.57
MSH6-203ENST00000420813 GABRDO14764 452 aa18.64■□□□□ 0.57
MSH6-203ENST00000420813 EIF3DO15371 548 aaKnown RBP eCLIP18.64■□□□□ 0.57
MSH6-203ENST00000420813 PCSK1P29120 753 aa18.64■□□□□ 0.57
MSH6-203ENST00000420813 AVPR1AP37288 418 aa18.64■□□□□ 0.57
MSH6-203ENST00000420813 SATB1Q01826 763 aa18.64■□□□□ 0.57
MSH6-203ENST00000420813 PUM1Q14671 1186 aaKnown RBP eCLIP18.64■□□□□ 0.57
MSH6-203ENST00000420813 ITPRIPL2Q3MIP1 535 aa18.64■□□□□ 0.57
MSH6-203ENST00000420813 CFAP221Q4G0U5 840 aa18.64■□□□□ 0.57
MSH6-203ENST00000420813 WDR44Q5JSH3 913 aa18.64■□□□□ 0.57
MSH6-203ENST00000420813 DPH6Q7L8W6 267 aa18.64■□□□□ 0.57
MSH6-203ENST00000420813 ADGRF2Q8IZF7 708 aa18.64■□□□□ 0.57
MSH6-203ENST00000420813 SYNPOQ8N3V7 929 aa18.64■□□□□ 0.57
MSH6-203ENST00000420813 NOC3LQ8WTT2 800 aaKnown RBP18.64■□□□□ 0.57
MSH6-203ENST00000420813 MRPS31Q92665 395 aaKnown RBP18.64■□□□□ 0.57
MSH6-203ENST00000420813 TRMT2BQ96GJ1 504 aaKnown RBP18.64■□□□□ 0.57
MSH6-203ENST00000420813 FUBP3Q96I24 572 aaKnown RBP eCLIP18.64■□□□□ 0.57
MSH6-203ENST00000420813 KIAA1586Q9HCI6 787 aa18.64■□□□□ 0.57
MSH6-203ENST00000420813 DLL3Q9NYJ7 618 aa18.64■□□□□ 0.57
MSH6-203ENST00000420813 R3HCC1Q9Y3T6 440 aaKnown RBP18.64■□□□□ 0.57
MSH6-203ENST00000420813 CUTAO60888 179 aa18.63■□□□□ 0.57
MSH6-203ENST00000420813 NOL4O94818 638 aa18.63■□□□□ 0.57
MSH6-203ENST00000420813 TNNC2P02585 160 aa18.63■□□□□ 0.57
MSH6-203ENST00000420813 PDIA4P13667 645 aaKnown RBP18.63■□□□□ 0.57
MSH6-203ENST00000420813 ACAT1P24752 427 aaKnown RBP18.63■□□□□ 0.57
MSH6-203ENST00000420813 GPR15P49685 360 aa18.63■□□□□ 0.57
MSH6-203ENST00000420813 TNK2Q07912 1038 aa18.63■□□□□ 0.57
MSH6-203ENST00000420813 MYO1EQ12965 1108 aa18.63■□□□□ 0.57
MSH6-203ENST00000420813 CCINQ13939 588 aa18.63■□□□□ 0.57
MSH6-203ENST00000420813 ZNF268Q14587 947 aaPredicted RBP18.63■□□□□ 0.57
MSH6-203ENST00000420813 SOWAHAQ2M3V2 549 aa18.63■□□□□ 0.57
MSH6-203ENST00000420813 SCARA3Q6AZY7 606 aa18.63■□□□□ 0.57
MSH6-203ENST00000420813 LIMS2Q7Z4I7 341 aa18.63■□□□□ 0.57
MSH6-203ENST00000420813 MON1AQ86VX9 555 aa18.63■□□□□ 0.57
MSH6-203ENST00000420813 OSTM1Q86WC4 334 aa18.63■□□□□ 0.57
MSH6-203ENST00000420813 MAB21L3Q8N8X9 362 aa18.63■□□□□ 0.57
MSH6-203ENST00000420813 IQUBQ8NA54 791 aa18.63■□□□□ 0.57
MSH6-203ENST00000420813 GLIS3Q8NEA6 775 aa18.63■□□□□ 0.57
MSH6-203ENST00000420813 FAM84AQ96KN4 292 aa18.63■□□□□ 0.57
MSH6-203ENST00000420813 MYRFLQ96LU7 910 aa18.63■□□□□ 0.57
MSH6-203ENST00000420813 FAM83CQ9BQN1 747 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms