RNA–Protein interactions for RNA: ENST00000420692.6

CTSB-203, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 2,230 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-203ENST00000420692 AFG1LQ8WV93 481 aa17.06■□□□□ 0.32
CTSB-203ENST00000420692 HAUS1Q96CS2 278 aa17.06■□□□□ 0.32
CTSB-203ENST00000420692 CHMP6Q96FZ7 201 aa17.06■□□□□ 0.32
CTSB-203ENST00000420692 C9orf72Q96LT7 481 aa17.06■□□□□ 0.32
CTSB-203ENST00000420692 C16orf70Q9BSU1 422 aa17.06■□□□□ 0.32
CTSB-203ENST00000420692 TRIP11Q15643 1979 aa17.06■□□□□ 0.32
CTSB-203ENST00000420692 LOC102724159A0A0B4J2E5 919 aa17.05■□□□□ 0.32
CTSB-203ENST00000420692 LRCH4O75427 683 aa17.05■□□□□ 0.32
CTSB-203ENST00000420692 TCEA3O75764 348 aa17.05■□□□□ 0.32
CTSB-203ENST00000420692 TJP3O95049 919 aa17.05■□□□□ 0.32
CTSB-203ENST00000420692 CPP00450 1065 aa17.05■□□□□ 0.32
CTSB-203ENST00000420692 PHKA2P46019 1235 aa17.05■□□□□ 0.32
CTSB-203ENST00000420692 COPS2P61201 443 aa17.05■□□□□ 0.32
CTSB-203ENST00000420692 LAMC2Q13753 1193 aa17.05■□□□□ 0.32
CTSB-203ENST00000420692 PWP2Q15269 919 aaKnown RBP17.05■□□□□ 0.32
CTSB-203ENST00000420692 SPRED3Q2MJR0 410 aa17.05■□□□□ 0.32
CTSB-203ENST00000420692 VSTM1Q6UX27 236 aa17.05■□□□□ 0.32
CTSB-203ENST00000420692 XYLT1Q86Y38 959 aa17.05■□□□□ 0.32
CTSB-203ENST00000420692 EMC1Q8N766 993 aa17.05■□□□□ 0.32
CTSB-203ENST00000420692 FBXO41Q8TF61 875 aa17.05■□□□□ 0.32
CTSB-203ENST00000420692 SAE1Q9UBE0 346 aaPredicted RBP17.05■□□□□ 0.32
CTSB-203ENST00000420692 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.05■□□□□ 0.32
CTSB-203ENST00000420692 LRRD1A4D1F6 860 aa17.05■□□□□ 0.32
CTSB-203ENST00000420692 CILPO75339 1184 aa17.05■□□□□ 0.32
CTSB-203ENST00000420692 MCF2P10911 925 aa17.05■□□□□ 0.32
CTSB-203ENST00000420692 KRT3P12035 628 aa17.05■□□□□ 0.32
CTSB-203ENST00000420692 MPP2Q14168 576 aa17.05■□□□□ 0.32
CTSB-203ENST00000420692 EAPPQ56P03 285 aaPredicted RBP17.05■□□□□ 0.32
CTSB-203ENST00000420692 TFDP3Q5H9I0 405 aa17.05■□□□□ 0.32
CTSB-203ENST00000420692 ZFYVE27Q5T4F4 411 aa17.05■□□□□ 0.32
CTSB-203ENST00000420692 MAP1SQ66K74 1059 aaPredicted RBP17.05■□□□□ 0.32
CTSB-203ENST00000420692 USP50Q70EL3 339 aaPredicted RBP17.05■□□□□ 0.32
CTSB-203ENST00000420692 ILDR2Q71H61 639 aa17.05■□□□□ 0.32
CTSB-203ENST00000420692 GSTA5Q7RTV2 222 aa17.05■□□□□ 0.32
CTSB-203ENST00000420692 ZCCHC9Q8N567 271 aaKnown RBP17.05■□□□□ 0.32
CTSB-203ENST00000420692 PPM1EQ8WY54 764 aa17.05■□□□□ 0.32
CTSB-203ENST00000420692 KAT2BQ92831 832 aa17.05■□□□□ 0.32
CTSB-203ENST00000420692 PRMT1Q99873 361 aaKnown RBP17.05■□□□□ 0.32
CTSB-203ENST00000420692 CXCL16Q9H2A7 254 aa17.05■□□□□ 0.32
CTSB-203ENST00000420692 ZNF148Q9UQR1 794 aa17.05■□□□□ 0.32
CTSB-203ENST00000420692 DRG1Q9Y295 367 aaKnown RBP17.05■□□□□ 0.32
CTSB-203ENST00000420692 PLXNB2O15031 1838 aa17.04■□□□□ 0.32
CTSB-203ENST00000420692 RBM47A0AV96 593 aaKnown RBP17.04■□□□□ 0.32
CTSB-203ENST00000420692 DNALI1O14645 258 aaPredicted RBP17.04■□□□□ 0.32
CTSB-203ENST00000420692 CYP3A5P20815 502 aa17.04■□□□□ 0.32
CTSB-203ENST00000420692 PSMA2P25787 234 aa17.04■□□□□ 0.32
CTSB-203ENST00000420692 ADORA2AP29274 412 aa17.04■□□□□ 0.32
CTSB-203ENST00000420692 EPHX2P34913 555 aa17.04■□□□□ 0.32
CTSB-203ENST00000420692 ADCYAP1R1P41586 468 aa17.04■□□□□ 0.32
CTSB-203ENST00000420692 VCPP55072 806 aaKnown RBP17.04■□□□□ 0.32
CTSB-203ENST00000420692 PSMC1P62191 440 aaKnown RBP17.04■□□□□ 0.32
CTSB-203ENST00000420692 PTPN11Q06124 597 aaPredicted RBP17.04■□□□□ 0.32
CTSB-203ENST00000420692 TAZQ16635 292 aa17.04■□□□□ 0.32
CTSB-203ENST00000420692 SMTNL2Q2TAL5 461 aa17.04■□□□□ 0.32
CTSB-203ENST00000420692 KCNT1Q5JUK3 1230 aa17.04■□□□□ 0.32
CTSB-203ENST00000420692 ZC3H15Q8WU90 426 aaKnown RBP17.04■□□□□ 0.32
CTSB-203ENST00000420692 ARHGEF2Q92974 986 aaKnown RBP17.04■□□□□ 0.32
CTSB-203ENST00000420692 NKD2Q969F2 451 aaPredicted RBP17.04■□□□□ 0.32
CTSB-203ENST00000420692 OSBPL7Q9BZF2 842 aa17.04■□□□□ 0.32
CTSB-203ENST00000420692 CCDC134Q9H6E4 229 aa17.04■□□□□ 0.32
CTSB-203ENST00000420692 INTS9Q9NV88 658 aaKnown RBP17.04■□□□□ 0.32
CTSB-203ENST00000420692 EURLQ9NYK6 297 aa17.04■□□□□ 0.32
CTSB-203ENST00000420692 CEP83Q9Y592 693 aa17.04■□□□□ 0.32
CTSB-203ENST00000420692 MICAL2O94851 1124 aa17.04■□□□□ 0.32
CTSB-203ENST00000420692 CD48P09326 243 aa17.04■□□□□ 0.32
CTSB-203ENST00000420692 SNAPC2Q13487 334 aa17.04■□□□□ 0.32
CTSB-203ENST00000420692 MARCH8Q5T0T0 291 aa17.04■□□□□ 0.32
CTSB-203ENST00000420692 SMYD5Q6GMV2 418 aa17.04■□□□□ 0.32
CTSB-203ENST00000420692 POLNQ7Z5Q5 900 aa17.04■□□□□ 0.32
CTSB-203ENST00000420692 LRRC34Q8IZ02 419 aa17.04■□□□□ 0.32
CTSB-203ENST00000420692 MICALL1Q8N3F8 863 aa17.04■□□□□ 0.32
CTSB-203ENST00000420692 OTUD6BQ8N6M0 293 aa17.04■□□□□ 0.32
CTSB-203ENST00000420692 SLC35B2Q8TB61 432 aa17.04■□□□□ 0.32
CTSB-203ENST00000420692 L3MBTL3Q96JM7 780 aaPredicted RBP17.04■□□□□ 0.32
CTSB-203ENST00000420692 RBM15Q96T37 977 aaKnown RBP eCLIP17.04■□□□□ 0.32
CTSB-203ENST00000420692 C10orf88Q9H8K7 445 aa17.04■□□□□ 0.32
CTSB-203ENST00000420692 VRTNQ9H8Y1 702 aa17.04■□□□□ 0.32
CTSB-203ENST00000420692 ZWILCHQ9H900 591 aa17.04■□□□□ 0.32
CTSB-203ENST00000420692 DDX56Q9NY93 547 aaKnown RBP17.04■□□□□ 0.32
CTSB-203ENST00000420692 STRIP2Q9ULQ0 834 aa17.04■□□□□ 0.32
CTSB-203ENST00000420692 SNAI1O95863 264 aaPredicted RBP17.03■□□□□ 0.32
CTSB-203ENST00000420692 POLR2BP30876 1174 aaKnown RBP17.03■□□□□ 0.32
CTSB-203ENST00000420692 CETN2P41208 172 aa17.03■□□□□ 0.32
CTSB-203ENST00000420692 GPD2P43304 727 aa17.03■□□□□ 0.32
CTSB-203ENST00000420692 MAGEA4P43358 317 aa17.03■□□□□ 0.32
CTSB-203ENST00000420692 ARSEP51690 589 aa17.03■□□□□ 0.32
CTSB-203ENST00000420692 TAF5Q15542 800 aa17.03■□□□□ 0.32
CTSB-203ENST00000420692 MICALCLQ6ZW33 695 aa17.03■□□□□ 0.32
CTSB-203ENST00000420692 BBOF1Q8ND07 529 aa17.03■□□□□ 0.32
CTSB-203ENST00000420692 PPTC7Q8NI37 304 aa17.03■□□□□ 0.32
CTSB-203ENST00000420692 TMEM176AQ96HP8 235 aa17.03■□□□□ 0.32
CTSB-203ENST00000420692 TMEM121Q9BTD3 319 aa17.03■□□□□ 0.32
CTSB-203ENST00000420692 AKT3Q9Y243 479 aa17.03■□□□□ 0.32
CTSB-203ENST00000420692 CITO14578 2027 aa17.03■□□□□ 0.32
CTSB-203ENST00000420692 MED7O43513 233 aa17.02■□□□□ 0.32
CTSB-203ENST00000420692 GH1P01241 217 aa17.02■□□□□ 0.32
CTSB-203ENST00000420692 GSCP56915 257 aaPredicted RBP17.02■□□□□ 0.32
CTSB-203ENST00000420692 LMNB2Q03252 620 aa17.02■□□□□ 0.32
CTSB-203ENST00000420692 FASTKD3Q14CZ7 662 aaKnown RBP17.02■□□□□ 0.32
CTSB-203ENST00000420692 MTHFD1LQ6UB35 978 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms