RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 C8orf33Q9H7E9 229 aaPredicted RBP22.91■■□□□ 1.26
PTPN4-202ENST00000420482 CGNQ9P2M7 1197 aaKnown RBP22.91■■□□□ 1.26
PTPN4-202ENST00000420482 UXTQ9UBK9 157 aaPredicted RBP22.91■■□□□ 1.26
PTPN4-202ENST00000420482 COL4A3Q01955 1670 aa22.9■■□□□ 1.26
PTPN4-202ENST00000420482 PVALEFA0A1B0GWK0 134 aa22.9■■□□□ 1.26
PTPN4-202ENST00000420482 KPNA1P52294 538 aaPredicted RBP22.9■■□□□ 1.26
PTPN4-202ENST00000420482 PLCB2Q00722 1185 aa22.9■■□□□ 1.26
PTPN4-202ENST00000420482 SNRNP35Q16560 246 aaKnown RBP22.9■■□□□ 1.26
PTPN4-202ENST00000420482 INTS6LQ5JSJ4 861 aaKnown RBP22.9■■□□□ 1.26
PTPN4-202ENST00000420482 STXBP5Q5T5C0 1151 aa22.9■■□□□ 1.26
PTPN4-202ENST00000420482 EPM2AIP1Q7L775 607 aaPredicted RBP22.9■■□□□ 1.26
PTPN4-202ENST00000420482 ADGRF2Q8IZF7 708 aa22.9■■□□□ 1.26
PTPN4-202ENST00000420482 HPDLQ96IR7 371 aa22.9■■□□□ 1.26
PTPN4-202ENST00000420482 PCDHA7Q9UN72 937 aa22.9■■□□□ 1.26
PTPN4-202ENST00000420482 SOBPA7XYQ1 873 aa22.89■■□□□ 1.25
PTPN4-202ENST00000420482 AVPR1AP37288 418 aa22.89■■□□□ 1.25
PTPN4-202ENST00000420482 ID4P47928 161 aa22.89■■□□□ 1.25
PTPN4-202ENST00000420482 CSTF1Q05048 431 aaKnown RBP22.89■■□□□ 1.25
PTPN4-202ENST00000420482 RESP18Q5W5W9 173 aa22.89■■□□□ 1.25
PTPN4-202ENST00000420482 ERMP1Q7Z2K6 904 aa22.89■■□□□ 1.25
PTPN4-202ENST00000420482 CBWD2Q8IUF1 395 aa22.89■■□□□ 1.25
PTPN4-202ENST00000420482 SPATA2LQ8IUW3 424 aaPredicted RBP22.89■■□□□ 1.25
PTPN4-202ENST00000420482 GLIS3Q8NEA6 775 aa22.89■■□□□ 1.25
PTPN4-202ENST00000420482 BPIFB1Q8TDL5 484 aa22.89■■□□□ 1.25
PTPN4-202ENST00000420482 ATRIPQ8WXE1 791 aa22.89■■□□□ 1.25
PTPN4-202ENST00000420482 PI4K2AQ9BTU6 479 aa22.89■■□□□ 1.25
PTPN4-202ENST00000420482 AGPAT3Q9NRZ7 376 aa22.89■■□□□ 1.25
PTPN4-202ENST00000420482 PCDHGA2Q9Y5H1 932 aa22.89■■□□□ 1.25
PTPN4-202ENST00000420482 TNNI1P19237 187 aa22.88■■□□□ 1.25
PTPN4-202ENST00000420482 CYP4F8P98187 520 aa22.88■■□□□ 1.25
PTPN4-202ENST00000420482 LRRC32Q14392 662 aa22.88■■□□□ 1.25
PTPN4-202ENST00000420482 MAPRE1Q15691 268 aaKnown RBP22.88■■□□□ 1.25
PTPN4-202ENST00000420482 C4orf50Q6ZRC1 276 aa22.88■■□□□ 1.25
PTPN4-202ENST00000420482 CELF5Q8N6W0 485 aaKnown RBP22.88■■□□□ 1.25
PTPN4-202ENST00000420482 XXYLT1Q8NBI6 393 aa22.88■■□□□ 1.25
PTPN4-202ENST00000420482 CXorf38Q8TB03 319 aa22.88■■□□□ 1.25
PTPN4-202ENST00000420482 MRPS31Q92665 395 aaKnown RBP22.88■■□□□ 1.25
PTPN4-202ENST00000420482 FUBP3Q96I24 572 aaKnown RBP eCLIP22.88■■□□□ 1.25
PTPN4-202ENST00000420482 MKNK1Q9BUB5 465 aa22.88■■□□□ 1.25
PTPN4-202ENST00000420482 FAM126AQ9BYI3 521 aaPredicted RBP22.88■■□□□ 1.25
PTPN4-202ENST00000420482 SIX4Q9UIU6 781 aa22.88■■□□□ 1.25
PTPN4-202ENST00000420482 DMXL1Q9Y485 3027 aa22.88■■□□□ 1.25
PTPN4-202ENST00000420482 TICRRQ7Z2Z1 1910 aa22.88■■□□□ 1.25
PTPN4-202ENST00000420482 NUP210Q8TEM1 1887 aaPredicted RBP22.88■■□□□ 1.25
PTPN4-202ENST00000420482 ARNTLO00327 626 aa22.87■■□□□ 1.25
PTPN4-202ENST00000420482 DLATP10515 647 aaKnown RBP22.87■■□□□ 1.25
PTPN4-202ENST00000420482 ACAT1P24752 427 aaKnown RBP22.87■■□□□ 1.25
PTPN4-202ENST00000420482 CCNE1P24864 410 aa22.87■■□□□ 1.25
PTPN4-202ENST00000420482 AFMP43652 599 aa22.87■■□□□ 1.25
PTPN4-202ENST00000420482 CDR1P51861 262 aa22.87■■□□□ 1.25
PTPN4-202ENST00000420482 CFAP221Q4G0U5 840 aa22.87■■□□□ 1.25
PTPN4-202ENST00000420482 LMBRD2Q68DH5 695 aaPredicted RBP22.87■■□□□ 1.25
PTPN4-202ENST00000420482 NELFCDQ8IXH7 590 aa22.87■■□□□ 1.25
PTPN4-202ENST00000420482 MAML2Q8IZL2 1156 aaPredicted RBP22.87■■□□□ 1.25
PTPN4-202ENST00000420482 CMTM8Q8IZV2 173 aa22.87■■□□□ 1.25
PTPN4-202ENST00000420482 RDH13Q8NBN7 331 aa22.87■■□□□ 1.25
PTPN4-202ENST00000420482 GOLGA5Q8TBA6 731 aa22.87■■□□□ 1.25
PTPN4-202ENST00000420482 MMS19Q96T76 1030 aa22.87■■□□□ 1.25
PTPN4-202ENST00000420482 HINFPQ9BQA5 517 aa22.87■■□□□ 1.25
PTPN4-202ENST00000420482 BLZF1Q9H2G9 400 aa22.87■■□□□ 1.25
PTPN4-202ENST00000420482 CHRDQ9H2X0 955 aa22.87■■□□□ 1.25
PTPN4-202ENST00000420482 IL21Q9HBE4 155 aa22.87■■□□□ 1.25
PTPN4-202ENST00000420482 RCOR1Q9UKL0 485 aa22.87■■□□□ 1.25
PTPN4-202ENST00000420482 GTF3C4Q9UKN8 822 aa22.87■■□□□ 1.25
PTPN4-202ENST00000420482 MAGED2Q9UNF1 606 aaPredicted RBP22.87■■□□□ 1.25
PTPN4-202ENST00000420482 GABRDO14764 452 aa22.86■■□□□ 1.25
PTPN4-202ENST00000420482 HOXD13P35453 343 aa22.86■■□□□ 1.25
PTPN4-202ENST00000420482 CYP2J2P51589 502 aa22.86■■□□□ 1.25
PTPN4-202ENST00000420482 NRLP54845 237 aa22.86■■□□□ 1.25
PTPN4-202ENST00000420482 NLRP12P59046 1061 aa22.86■■□□□ 1.25
PTPN4-202ENST00000420482 DNM1Q05193 864 aaKnown RBP22.86■■□□□ 1.25
PTPN4-202ENST00000420482 SOWAHAQ2M3V2 549 aa22.86■■□□□ 1.25
PTPN4-202ENST00000420482 MAMSTRQ6ZN01 415 aa22.86■■□□□ 1.25
PTPN4-202ENST00000420482 RALGPS2Q86X27 583 aaPredicted RBP22.86■■□□□ 1.25
PTPN4-202ENST00000420482 SPRYD3Q8NCJ5 442 aa22.86■■□□□ 1.25
PTPN4-202ENST00000420482 OR5B17Q8NGF7 314 aa22.86■■□□□ 1.25
PTPN4-202ENST00000420482 SCFD1Q8WVM8 642 aa22.86■■□□□ 1.25
PTPN4-202ENST00000420482 RSPRY1Q96DX4 576 aa22.86■■□□□ 1.25
PTPN4-202ENST00000420482 KIF9Q9HAQ2 790 aa22.86■■□□□ 1.25
PTPN4-202ENST00000420482 LMAN1LQ9HAT1 526 aa22.86■■□□□ 1.25
PTPN4-202ENST00000420482 TMLHEQ9NVH6 421 aa22.86■■□□□ 1.25
PTPN4-202ENST00000420482 ZSCAN32Q9NX65 697 aa22.86■■□□□ 1.25
PTPN4-202ENST00000420482 CDH9Q9ULB4 789 aa22.86■■□□□ 1.25
PTPN4-202ENST00000420482 CEP250Q9BV73 2442 aa22.85■■□□□ 1.25
PTPN4-202ENST00000420482 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.85■■□□□ 1.25
PTPN4-202ENST00000420482 CLIC2O15247 247 aa22.85■■□□□ 1.25
PTPN4-202ENST00000420482 TGFB1I1O43294 461 aa22.85■■□□□ 1.25
PTPN4-202ENST00000420482 SLFN14P0C7P3 912 aa22.85■■□□□ 1.25
PTPN4-202ENST00000420482 CCR3P51677 355 aa22.85■■□□□ 1.25
PTPN4-202ENST00000420482 EHHADHQ08426 723 aa22.85■■□□□ 1.25
PTPN4-202ENST00000420482 MTAPQ13126 283 aa22.85■■□□□ 1.25
PTPN4-202ENST00000420482 PSMD6Q15008 389 aa22.85■■□□□ 1.25
PTPN4-202ENST00000420482 KNOP1Q1ED39 458 aaKnown RBP22.85■■□□□ 1.25
PTPN4-202ENST00000420482 BMT2Q1RMZ1 405 aa22.85■■□□□ 1.25
PTPN4-202ENST00000420482 TRAPPC11Q7Z392 1133 aa22.85■■□□□ 1.25
PTPN4-202ENST00000420482 GPIHBP1Q8IV16 184 aa22.85■■□□□ 1.25
PTPN4-202ENST00000420482 MAB21L3Q8N8X9 362 aa22.85■■□□□ 1.25
PTPN4-202ENST00000420482 FSIP1Q8NA03 581 aa22.85■■□□□ 1.25
PTPN4-202ENST00000420482 TRMT2BQ96GJ1 504 aaKnown RBP22.85■■□□□ 1.25
PTPN4-202ENST00000420482 CGRRF1Q99675 332 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms