RNA–Protein interactions for RNA: ENST00000417946.5

CPS1-202, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-202ENST00000417946 ATP13A2Q9NQ11 1180 aa7.3□□□□□ -1.24
CPS1-202ENST00000417946 CXXC1Q9P0U4 656 aaPredicted RBP7.3□□□□□ -1.24
CPS1-202ENST00000417946 PPP2R2CQ9Y2T4 447 aa7.3□□□□□ -1.24
CPS1-202ENST00000417946 PCDHB4Q9Y5E5 795 aa7.3□□□□□ -1.24
CPS1-202ENST00000417946 SNX9Q9Y5X1 595 aa7.3□□□□□ -1.24
CPS1-202ENST00000417946 EPN1Q9Y6I3 576 aaPredicted RBP7.3□□□□□ -1.24
CPS1-202ENST00000417946 COL4A4P53420 1690 aaPredicted RBP7.3□□□□□ -1.24
CPS1-202ENST00000417946 ATG2AQ2TAZ0 1938 aa7.3□□□□□ -1.24
CPS1-202ENST00000417946 MYH10P35580 1976 aa7.29□□□□□ -1.24
CPS1-202ENST00000417946 ATP8B3O60423 1300 aa7.29□□□□□ -1.24
CPS1-202ENST00000417946 ABHD14A-ACY1A0A1B0GW23 586 aa7.29□□□□□ -1.24
CPS1-202ENST00000417946 I3L4J1 428 aa7.29□□□□□ -1.24
CPS1-202ENST00000417946 M0QZQ0 153 aa7.29□□□□□ -1.24
CPS1-202ENST00000417946 GABRDO14764 452 aa7.29□□□□□ -1.24
CPS1-202ENST00000417946 XPOTO43592 962 aaKnown RBP7.29□□□□□ -1.24
CPS1-202ENST00000417946 ZNF500O60304 480 aaPredicted RBP7.29□□□□□ -1.24
CPS1-202ENST00000417946 TACC1O75410 805 aa7.29□□□□□ -1.24
CPS1-202ENST00000417946 CYP1A1P04798 512 aaPredicted RBP7.29□□□□□ -1.24
CPS1-202ENST00000417946 PFKMP08237 780 aa7.29□□□□□ -1.24
CPS1-202ENST00000417946 MMEP08473 750 aa7.29□□□□□ -1.24
CPS1-202ENST00000417946 KRT5P13647 590 aa7.29□□□□□ -1.24
CPS1-202ENST00000417946 RAG1P15918 1043 aa7.29□□□□□ -1.24
CPS1-202ENST00000417946 WARSP23381 471 aaKnown RBP7.29□□□□□ -1.24
CPS1-202ENST00000417946 BRD2P25440 801 aaKnown RBP7.29□□□□□ -1.24
CPS1-202ENST00000417946 USP8P40818 1118 aa7.29□□□□□ -1.24
CPS1-202ENST00000417946 PNPLA4P41247 253 aa7.29□□□□□ -1.24
CPS1-202ENST00000417946 BRCC3P46736 316 aa7.29□□□□□ -1.24
CPS1-202ENST00000417946 SLC11A1P49279 550 aa7.29□□□□□ -1.24
CPS1-202ENST00000417946 RGS19P49795 217 aa7.29□□□□□ -1.24
CPS1-202ENST00000417946 NDST1P52848 882 aa7.29□□□□□ -1.24
CPS1-202ENST00000417946 TNNC1P63316 161 aa7.29□□□□□ -1.24
CPS1-202ENST00000417946 INSM1Q01101 510 aaPredicted RBP7.29□□□□□ -1.24
CPS1-202ENST00000417946 IKBKEQ14164 716 aa7.29□□□□□ -1.24
CPS1-202ENST00000417946 SV2CQ496J9 727 aa7.29□□□□□ -1.24
CPS1-202ENST00000417946 PAN2Q504Q3 1202 aaKnown RBP7.29□□□□□ -1.24
CPS1-202ENST00000417946 TDRD12Q587J7 1177 aaKnown RBP7.29□□□□□ -1.24
CPS1-202ENST00000417946 TMEM240Q5SV17 173 aa7.29□□□□□ -1.24
CPS1-202ENST00000417946 RASIP1Q5U651 963 aa7.29□□□□□ -1.24
CPS1-202ENST00000417946 TAF3Q5VWG9 929 aa7.29□□□□□ -1.24
CPS1-202ENST00000417946 WSCD1Q658N2 575 aa7.29□□□□□ -1.24
CPS1-202ENST00000417946 ZNF365Q70YC5 407 aa7.29□□□□□ -1.24
CPS1-202ENST00000417946 RNF168Q8IYW5 571 aaPredicted RBP7.29□□□□□ -1.24
CPS1-202ENST00000417946 RPUSD2Q8IZ73 545 aaKnown RBP7.29□□□□□ -1.24
CPS1-202ENST00000417946 TMEM199Q8N511 208 aa7.29□□□□□ -1.24
CPS1-202ENST00000417946 TOP6BLQ8N6T0 577 aa7.29□□□□□ -1.24
CPS1-202ENST00000417946 TOP1MTQ969P6 601 aa7.29□□□□□ -1.24
CPS1-202ENST00000417946 SENP8Q96LD8 212 aa7.29□□□□□ -1.24
CPS1-202ENST00000417946 UROC1Q96N76 676 aa7.29□□□□□ -1.24
CPS1-202ENST00000417946 PKMYT1Q99640 499 aa7.29□□□□□ -1.24
CPS1-202ENST00000417946 FAM124BQ9H5Z6 455 aaPredicted RBP7.29□□□□□ -1.24
CPS1-202ENST00000417946 RRAGDQ9NQL2 400 aaPredicted RBP7.29□□□□□ -1.24
CPS1-202ENST00000417946 TRIM10Q9UDY6 481 aa7.29□□□□□ -1.24
CPS1-202ENST00000417946 ADAMTS1Q9UHI8 967 aa7.29□□□□□ -1.24
CPS1-202ENST00000417946 CYTH4Q9UIA0 394 aa7.29□□□□□ -1.24
CPS1-202ENST00000417946 SALL4Q9UJQ4 1053 aa7.29□□□□□ -1.24
CPS1-202ENST00000417946 NAGPAQ9UK23 515 aa7.29□□□□□ -1.24
CPS1-202ENST00000417946 BARX2Q9UMQ3 279 aaPredicted RBP7.29□□□□□ -1.24
CPS1-202ENST00000417946 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.29□□□□□ -1.24
CPS1-202ENST00000417946 PLXNA4Q9HCM2 1894 aa7.29□□□□□ -1.24
CPS1-202ENST00000417946 NCANO14594 1321 aa7.28□□□□□ -1.24
CPS1-202ENST00000417946 FAM170AA1A519 330 aa7.28□□□□□ -1.24
CPS1-202ENST00000417946 TBKBP1A7MCY6 615 aa7.28□□□□□ -1.24
CPS1-202ENST00000417946 O00370 1275 aa7.28□□□□□ -1.24
CPS1-202ENST00000417946 PJA2O43164 708 aa7.28□□□□□ -1.24
CPS1-202ENST00000417946 AKR1B10O60218 316 aa7.28□□□□□ -1.24
CPS1-202ENST00000417946 BAIAP3O94812 1187 aa7.28□□□□□ -1.24
CPS1-202ENST00000417946 CYP11A1P05108 521 aa7.28□□□□□ -1.24
CPS1-202ENST00000417946 GALTP07902 379 aa7.28□□□□□ -1.24
CPS1-202ENST00000417946 PAEPP09466 180 aa7.28□□□□□ -1.24
CPS1-202ENST00000417946 UNGP13051 313 aaPredicted RBP7.28□□□□□ -1.24
CPS1-202ENST00000417946 SYN1P17600 705 aa7.28□□□□□ -1.24
CPS1-202ENST00000417946 LMO2P25791 158 aa7.28□□□□□ -1.24
CPS1-202ENST00000417946 TKTP29401 623 aaKnown RBP7.28□□□□□ -1.24
CPS1-202ENST00000417946 SSTR3P32745 418 aaPredicted RBP7.28□□□□□ -1.24
CPS1-202ENST00000417946 CDH5P33151 784 aaPredicted RBP7.28□□□□□ -1.24
CPS1-202ENST00000417946 PBX3P40426 434 aa7.28□□□□□ -1.24
CPS1-202ENST00000417946 VAV2P52735 878 aa7.28□□□□□ -1.24
CPS1-202ENST00000417946 NOMO3P69849 1222 aa7.28□□□□□ -1.24
CPS1-202ENST00000417946 HTRA4P83105 476 aaPredicted RBP7.28□□□□□ -1.24
CPS1-202ENST00000417946 FPGSQ05932 587 aa7.28□□□□□ -1.24
CPS1-202ENST00000417946 MYO1EQ12965 1108 aa7.28□□□□□ -1.24
CPS1-202ENST00000417946 PTP4A2Q12974 167 aa7.28□□□□□ -1.24
CPS1-202ENST00000417946 BMS1Q14692 1282 aaKnown RBP7.28□□□□□ -1.24
CPS1-202ENST00000417946 CLEC16AQ2KHT3 1053 aa7.28□□□□□ -1.24
CPS1-202ENST00000417946 ZNF394Q53GI3 561 aa7.28□□□□□ -1.24
CPS1-202ENST00000417946 DENND1BQ6P3S1 775 aa7.28□□□□□ -1.24
CPS1-202ENST00000417946 ZNF662Q6ZS27 426 aa7.28□□□□□ -1.24
CPS1-202ENST00000417946 LRRC43Q8N309 656 aa7.28□□□□□ -1.24
CPS1-202ENST00000417946 WDTC1Q8N5D0 677 aa7.28□□□□□ -1.24
CPS1-202ENST00000417946 OR10T2Q8NGX3 314 aa7.28□□□□□ -1.24
CPS1-202ENST00000417946 HASPINQ8TF76 798 aa7.28□□□□□ -1.24
CPS1-202ENST00000417946 ZNF606Q8WXB4 792 aa7.28□□□□□ -1.24
CPS1-202ENST00000417946 RSPH1Q8WYR4 309 aa7.28□□□□□ -1.24
CPS1-202ENST00000417946 ARHGEF26Q96DR7 871 aa7.28□□□□□ -1.24
CPS1-202ENST00000417946 SUSD3Q96L08 255 aa7.28□□□□□ -1.24
CPS1-202ENST00000417946 CCDC42Q96M95 316 aa7.28□□□□□ -1.24
CPS1-202ENST00000417946 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.28□□□□□ -1.24
CPS1-202ENST00000417946 CRTAC1Q9NQ79 661 aa7.28□□□□□ -1.24
CPS1-202ENST00000417946 TMEM30AQ9NV96 361 aa7.28□□□□□ -1.24
CPS1-202ENST00000417946 ZNHIT6Q9NWK9 470 aaKnown RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms