RNA–Protein interactions for RNA: ENST00000417521.5

DDR1-231, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-231ENST00000417521 WARSP23381 471 aaKnown RBP17.54■□□□□ 0.4
DDR1-231ENST00000417521 ACAT1P24752 427 aaKnown RBP17.54■□□□□ 0.4
DDR1-231ENST00000417521 PFKPQ01813 784 aa17.54■□□□□ 0.4
DDR1-231ENST00000417521 TEAD2Q15562 447 aa17.54■□□□□ 0.4
DDR1-231ENST00000417521 ZNF658Q5TYW1 1059 aaPredicted RBP17.54■□□□□ 0.4
DDR1-231ENST00000417521 CWF19L1Q69YN2 538 aaKnown RBP17.54■□□□□ 0.4
DDR1-231ENST00000417521 TMEM105Q8N8V8 129 aa17.54■□□□□ 0.4
DDR1-231ENST00000417521 FAM200AQ8TCP9 573 aa17.54■□□□□ 0.4
DDR1-231ENST00000417521 TMC2Q8TDI7 906 aa17.54■□□□□ 0.4
DDR1-231ENST00000417521 KBTBD7Q8WVZ9 684 aa17.54■□□□□ 0.4
DDR1-231ENST00000417521 ZSWIM3Q96MP5 696 aa17.54■□□□□ 0.4
DDR1-231ENST00000417521 MMS19Q96T76 1030 aa17.54■□□□□ 0.4
DDR1-231ENST00000417521 ARHGEF3Q9NR81 526 aa17.54■□□□□ 0.4
DDR1-231ENST00000417521 GTF3C4Q9UKN8 822 aa17.54■□□□□ 0.4
DDR1-231ENST00000417521 CA14Q9ULX7 337 aa17.54■□□□□ 0.4
DDR1-231ENST00000417521 FRMD4BQ9Y2L6 1034 aa17.54■□□□□ 0.4
DDR1-231ENST00000417521 MAPK13O15264 365 aa17.53■□□□□ 0.4
DDR1-231ENST00000417521 PHACTR2O75167 634 aa17.53■□□□□ 0.4
DDR1-231ENST00000417521 TACC1O75410 805 aa17.53■□□□□ 0.4
DDR1-231ENST00000417521 FCARP24071 287 aa17.53■□□□□ 0.4
DDR1-231ENST00000417521 CASP4P49662 377 aa17.53■□□□□ 0.4
DDR1-231ENST00000417521 CDR1P51861 262 aa17.53■□□□□ 0.4
DDR1-231ENST00000417521 MORC3Q14149 939 aa17.53■□□□□ 0.4
DDR1-231ENST00000417521 TAF12Q16514 161 aa17.53■□□□□ 0.4
DDR1-231ENST00000417521 KLHL40Q2TBA0 621 aa17.53■□□□□ 0.4
DDR1-231ENST00000417521 WDR72Q3MJ13 1102 aa17.53■□□□□ 0.4
DDR1-231ENST00000417521 CFAP221Q4G0U5 840 aa17.53■□□□□ 0.4
DDR1-231ENST00000417521 CCDC183Q5T5S1 534 aa17.53■□□□□ 0.4
DDR1-231ENST00000417521 PHLDB3Q6NSJ2 640 aa17.53■□□□□ 0.4
DDR1-231ENST00000417521 CAVIN1Q6NZI2 390 aaKnown RBP17.53■□□□□ 0.4
DDR1-231ENST00000417521 FAM171BQ6P995 826 aa17.53■□□□□ 0.4
DDR1-231ENST00000417521 GAREM2Q75VX8 874 aa17.53■□□□□ 0.4
DDR1-231ENST00000417521 PRSS33Q8NF86 280 aa17.53■□□□□ 0.4
DDR1-231ENST00000417521 SYAP1Q96A49 352 aaPredicted RBP17.53■□□□□ 0.4
DDR1-231ENST00000417521 E2F7Q96AV8 911 aa17.53■□□□□ 0.4
DDR1-231ENST00000417521 FUBP3Q96I24 572 aaKnown RBP eCLIP17.53■□□□□ 0.4
DDR1-231ENST00000417521 SHDQ96IW2 340 aa17.53■□□□□ 0.4
DDR1-231ENST00000417521 LPIN3Q9BQK8 851 aa17.53■□□□□ 0.4
DDR1-231ENST00000417521 PI4K2AQ9BTU6 479 aa17.53■□□□□ 0.4
DDR1-231ENST00000417521 PLA2G2FQ9BZM2 168 aa17.53■□□□□ 0.4
DDR1-231ENST00000417521 XYLT2Q9H1B5 865 aa17.53■□□□□ 0.4
DDR1-231ENST00000417521 VRTNQ9H8Y1 702 aa17.53■□□□□ 0.4
DDR1-231ENST00000417521 ZNF334Q9HCZ1 680 aaPredicted RBP17.53■□□□□ 0.4
DDR1-231ENST00000417521 CDH9Q9ULB4 789 aa17.53■□□□□ 0.4
DDR1-231ENST00000417521 CACNA1AO00555 2505 aa17.53■□□□□ 0.4
DDR1-231ENST00000417521 ZNF318Q5VUA4 2279 aa17.52■□□□□ 0.4
DDR1-231ENST00000417521 IKBKBO14920 756 aa17.52■□□□□ 0.4
DDR1-231ENST00000417521 C4BPAP04003 597 aaKnown RBP17.52■□□□□ 0.4
DDR1-231ENST00000417521 LMO2P25791 158 aa17.52■□□□□ 0.4
DDR1-231ENST00000417521 GABRR2P28476 465 aa17.52■□□□□ 0.4
DDR1-231ENST00000417521 PTPN5P54829 565 aa17.52■□□□□ 0.4
DDR1-231ENST00000417521 MYL6P60660 151 aa17.52■□□□□ 0.4
DDR1-231ENST00000417521 RPL10AP62906 217 aaKnown RBP17.52■□□□□ 0.4
DDR1-231ENST00000417521 MAPRE1Q15691 268 aaKnown RBP17.52■□□□□ 0.4
DDR1-231ENST00000417521 CEP135Q66GS9 1140 aa17.52■□□□□ 0.4
DDR1-231ENST00000417521 ZSCAN18Q8TBC5 510 aaPredicted RBP17.52■□□□□ 0.4
DDR1-231ENST00000417521 GIPC2Q8TF65 315 aa17.52■□□□□ 0.4
DDR1-231ENST00000417521 ATXN3LQ9H3M9 355 aa17.52■□□□□ 0.4
DDR1-231ENST00000417521 SLITRK6Q9H5Y7 841 aa17.52■□□□□ 0.4
DDR1-231ENST00000417521 SCN1AP35498 2009 aa17.52■□□□□ 0.4
DDR1-231ENST00000417521 DOCK8Q8NF50 2099 aa17.52■□□□□ 0.39
DDR1-231ENST00000417521 MYBPHLA2RUH7 354 aa17.51■□□□□ 0.39
DDR1-231ENST00000417521 STK25O00506 426 aa17.51■□□□□ 0.39
DDR1-231ENST00000417521 GALR2O43603 387 aaPredicted RBP17.51■□□□□ 0.39
DDR1-231ENST00000417521 HCRTO43612 131 aa17.51■□□□□ 0.39
DDR1-231ENST00000417521 CSH1P0DML2 217 aa17.51■□□□□ 0.39
DDR1-231ENST00000417521 CSH2P0DML3 217 aa17.51■□□□□ 0.39
DDR1-231ENST00000417521 NR2F2P24468 414 aa17.51■□□□□ 0.39
DDR1-231ENST00000417521 RPL13P26373 211 aaKnown RBP17.51■□□□□ 0.39
DDR1-231ENST00000417521 CDC25CP30307 473 aa17.51■□□□□ 0.39
DDR1-231ENST00000417521 GNL1P36915 607 aaPredicted RBP17.51■□□□□ 0.39
DDR1-231ENST00000417521 PRCPP42785 496 aa17.51■□□□□ 0.39
DDR1-231ENST00000417521 STARD6P59095 220 aa17.51■□□□□ 0.39
DDR1-231ENST00000417521 TNNC1P63316 161 aa17.51■□□□□ 0.39
DDR1-231ENST00000417521 BIRC3Q13489 604 aa17.51■□□□□ 0.39
DDR1-231ENST00000417521 SLC44A4Q53GD3 710 aa17.51■□□□□ 0.39
DDR1-231ENST00000417521 TDRD10Q5VZ19 366 aaKnown RBP17.51■□□□□ 0.39
DDR1-231ENST00000417521 C4orf50Q6ZRC1 276 aa17.51■□□□□ 0.39
DDR1-231ENST00000417521 SPATA2LQ8IUW3 424 aaPredicted RBP17.51■□□□□ 0.39
DDR1-231ENST00000417521 SYT15Q9BQS2 421 aa17.51■□□□□ 0.39
DDR1-231ENST00000417521 IRF2BPLQ9H1B7 796 aa17.51■□□□□ 0.39
DDR1-231ENST00000417521 TBC1D17Q9HA65 648 aa17.51■□□□□ 0.39
DDR1-231ENST00000417521 IL21Q9HBE4 155 aa17.51■□□□□ 0.39
DDR1-231ENST00000417521 ANK1P16157 1881 aa17.51■□□□□ 0.39
DDR1-231ENST00000417521 PI15O43692 258 aa17.5■□□□□ 0.39
DDR1-231ENST00000417521 PDGFRBP09619 1106 aa17.5■□□□□ 0.39
DDR1-231ENST00000417521 CD44P16070 742 aaKnown RBP17.5■□□□□ 0.39
DDR1-231ENST00000417521 HMGA1P17096 107 aaKnown RBP17.5■□□□□ 0.39
DDR1-231ENST00000417521 PSMC3P17980 439 aa17.5■□□□□ 0.39
DDR1-231ENST00000417521 RFX1P22670 979 aa17.5■□□□□ 0.39
DDR1-231ENST00000417521 CYP2F1P24903 491 aa17.5■□□□□ 0.39
DDR1-231ENST00000417521 DLG4P78352 724 aa17.5■□□□□ 0.39
DDR1-231ENST00000417521 NHLH1Q02575 133 aa17.5■□□□□ 0.39
DDR1-231ENST00000417521 PRKCQQ04759 706 aa17.5■□□□□ 0.39
DDR1-231ENST00000417521 ENPEPQ07075 957 aa17.5■□□□□ 0.39
DDR1-231ENST00000417521 TCF15Q12870 199 aa17.5■□□□□ 0.39
DDR1-231ENST00000417521 NCOA4Q13772 614 aa17.5■□□□□ 0.39
DDR1-231ENST00000417521 ARHGAP15Q53QZ3 475 aa17.5■□□□□ 0.39
DDR1-231ENST00000417521 RBM43Q6ZSC3 357 aaKnown RBP17.5■□□□□ 0.39
DDR1-231ENST00000417521 DEPDC1BQ8WUY9 529 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms