RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 MTMR12Q9C0I1 747 aa19.79■□□□□ 0.76
VPS16-204ENST00000417508 RCOR1Q9UKL0 485 aa19.79■□□□□ 0.76
VPS16-204ENST00000417508 NUP210Q8TEM1 1887 aaPredicted RBP19.79■□□□□ 0.76
VPS16-204ENST00000417508 DENND4CQ5VZ89 1909 aa19.78■□□□□ 0.76
VPS16-204ENST00000417508 TICRRQ7Z2Z1 1910 aa19.78■□□□□ 0.76
VPS16-204ENST00000417508 PRPF40AO75400 957 aaKnown RBP19.78■□□□□ 0.76
VPS16-204ENST00000417508 FAM163BP0C2L3 166 aa19.78■□□□□ 0.76
VPS16-204ENST00000417508 CSTF1Q05048 431 aaKnown RBP19.78■□□□□ 0.76
VPS16-204ENST00000417508 STXBP5Q5T5C0 1151 aa19.78■□□□□ 0.76
VPS16-204ENST00000417508 RESP18Q5W5W9 173 aa19.78■□□□□ 0.76
VPS16-204ENST00000417508 LIMS2Q7Z4I7 341 aa19.78■□□□□ 0.76
VPS16-204ENST00000417508 CBWD2Q8IUF1 395 aa19.78■□□□□ 0.76
VPS16-204ENST00000417508 WDR49Q8IV35 697 aa19.78■□□□□ 0.76
VPS16-204ENST00000417508 GLIS3Q8NEA6 775 aa19.78■□□□□ 0.76
VPS16-204ENST00000417508 RSPRY1Q96DX4 576 aa19.78■□□□□ 0.76
VPS16-204ENST00000417508 FUBP3Q96I24 572 aaKnown RBP eCLIP19.78■□□□□ 0.76
VPS16-204ENST00000417508 HPDLQ96IR7 371 aa19.78■□□□□ 0.76
VPS16-204ENST00000417508 CHRDQ9H2X0 955 aa19.78■□□□□ 0.76
VPS16-204ENST00000417508 TMLHEQ9NVH6 421 aa19.78■□□□□ 0.76
VPS16-204ENST00000417508 THG1LQ9NWX6 298 aaKnown RBP19.78■□□□□ 0.76
VPS16-204ENST00000417508 UXTQ9UBK9 157 aaPredicted RBP19.78■□□□□ 0.76
VPS16-204ENST00000417508 NDRG2Q9UN36 371 aaKnown RBP19.78■□□□□ 0.76
VPS16-204ENST00000417508 PCDHGA2Q9Y5H1 932 aa19.78■□□□□ 0.76
VPS16-204ENST00000417508 PATJQ8NI35 1801 aa19.78■□□□□ 0.76
VPS16-204ENST00000417508 TGFB1I1O43294 461 aa19.77■□□□□ 0.76
VPS16-204ENST00000417508 KINO60870 393 aaKnown RBP19.77■□□□□ 0.76
VPS16-204ENST00000417508 F11P03951 625 aa19.77■□□□□ 0.76
VPS16-204ENST00000417508 HMGA1P17096 107 aaKnown RBP19.77■□□□□ 0.76
VPS16-204ENST00000417508 PPP2R5DQ14738 602 aa19.77■□□□□ 0.76
VPS16-204ENST00000417508 SOWAHAQ2M3V2 549 aa19.77■□□□□ 0.76
VPS16-204ENST00000417508 CFAP221Q4G0U5 840 aa19.77■□□□□ 0.76
VPS16-204ENST00000417508 HS2ST1Q7LGA3 356 aa19.77■□□□□ 0.76
VPS16-204ENST00000417508 ADGRF2Q8IZF7 708 aa19.77■□□□□ 0.76
VPS16-204ENST00000417508 CELF5Q8N6W0 485 aaKnown RBP19.77■□□□□ 0.76
VPS16-204ENST00000417508 XXYLT1Q8NBI6 393 aa19.77■□□□□ 0.76
VPS16-204ENST00000417508 BPIFB1Q8TDL5 484 aa19.77■□□□□ 0.76
VPS16-204ENST00000417508 ATRIPQ8WXE1 791 aa19.77■□□□□ 0.76
VPS16-204ENST00000417508 NELL1Q92832 810 aa19.77■□□□□ 0.76
VPS16-204ENST00000417508 PI4K2AQ9BTU6 479 aa19.77■□□□□ 0.76
VPS16-204ENST00000417508 SLC46A2Q9BY10 475 aa19.77■□□□□ 0.76
VPS16-204ENST00000417508 LMAN1LQ9HAT1 526 aa19.77■□□□□ 0.76
VPS16-204ENST00000417508 AGPAT3Q9NRZ7 376 aa19.77■□□□□ 0.76
VPS16-204ENST00000417508 ZSCAN32Q9NX65 697 aa19.77■□□□□ 0.76
VPS16-204ENST00000417508 COL4A3Q01955 1670 aa19.77■□□□□ 0.76
VPS16-204ENST00000417508 ZNF638Q14966 1978 aaKnown RBP19.77■□□□□ 0.75
VPS16-204ENST00000417508 COL4A2P08572 1712 aa19.76■□□□□ 0.75
VPS16-204ENST00000417508 OTOGLQ3ZCN5 2332 aa19.76■□□□□ 0.75
VPS16-204ENST00000417508 KPNA1P52294 538 aaPredicted RBP19.76■□□□□ 0.75
VPS16-204ENST00000417508 NLRP12P59046 1061 aa19.76■□□□□ 0.75
VPS16-204ENST00000417508 MAPRE1Q15691 268 aaKnown RBP19.76■□□□□ 0.75
VPS16-204ENST00000417508 SNRNP35Q16560 246 aaKnown RBP19.76■□□□□ 0.75
VPS16-204ENST00000417508 BMT2Q1RMZ1 405 aa19.76■□□□□ 0.75
VPS16-204ENST00000417508 FOXD4L6Q3SYB3 417 aaPredicted RBP19.76■□□□□ 0.75
VPS16-204ENST00000417508 FAM171BQ6P995 826 aa19.76■□□□□ 0.75
VPS16-204ENST00000417508 FOXD4L3Q6VB84 417 aaPredicted RBP19.76■□□□□ 0.75
VPS16-204ENST00000417508 RALGPS2Q86X27 583 aaPredicted RBP19.76■□□□□ 0.75
VPS16-204ENST00000417508 C12orf56Q8IXR9 622 aa19.76■□□□□ 0.75
VPS16-204ENST00000417508 CEP57L1Q8IYX8 460 aa19.76■□□□□ 0.75
VPS16-204ENST00000417508 CMTM8Q8IZV2 173 aa19.76■□□□□ 0.75
VPS16-204ENST00000417508 OR5B17Q8NGF7 314 aa19.76■□□□□ 0.75
VPS16-204ENST00000417508 SCFD1Q8WVM8 642 aa19.76■□□□□ 0.75
VPS16-204ENST00000417508 CEP295NLQ96MC4 621 aa19.76■□□□□ 0.75
VPS16-204ENST00000417508 FNBP1Q96RU3 617 aa19.76■□□□□ 0.75
VPS16-204ENST00000417508 PKMYT1Q99640 499 aa19.76■□□□□ 0.75
VPS16-204ENST00000417508 PRMT8Q9NR22 394 aaPredicted RBP19.76■□□□□ 0.75
VPS16-204ENST00000417508 GTF3C4Q9UKN8 822 aa19.76■□□□□ 0.75
VPS16-204ENST00000417508 NCANO14594 1321 aa19.76■□□□□ 0.75
VPS16-204ENST00000417508 SLFN14P0C7P3 912 aa19.75■□□□□ 0.75
VPS16-204ENST00000417508 CCNE1P24864 410 aa19.75■□□□□ 0.75
VPS16-204ENST00000417508 AVPR1AP37288 418 aa19.75■□□□□ 0.75
VPS16-204ENST00000417508 MAGEA11P43364 429 aa19.75■□□□□ 0.75
VPS16-204ENST00000417508 NRLP54845 237 aa19.75■□□□□ 0.75
VPS16-204ENST00000417508 CYP4F8P98187 520 aa19.75■□□□□ 0.75
VPS16-204ENST00000417508 MTAPQ13126 283 aa19.75■□□□□ 0.75
VPS16-204ENST00000417508 PSMD6Q15008 389 aa19.75■□□□□ 0.75
VPS16-204ENST00000417508 LMBRD2Q68DH5 695 aaPredicted RBP19.75■□□□□ 0.75
VPS16-204ENST00000417508 C4orf50Q6ZRC1 276 aa19.75■□□□□ 0.75
VPS16-204ENST00000417508 TRAPPC11Q7Z392 1133 aa19.75■□□□□ 0.75
VPS16-204ENST00000417508 TMEM150AQ86TG1 271 aa19.75■□□□□ 0.75
VPS16-204ENST00000417508 MON1AQ86VX9 555 aa19.75■□□□□ 0.75
VPS16-204ENST00000417508 SPATA2LQ8IUW3 424 aaPredicted RBP19.75■□□□□ 0.75
VPS16-204ENST00000417508 ZBTB44Q8NCP5 570 aa19.75■□□□□ 0.75
VPS16-204ENST00000417508 GOLGA5Q8TBA6 731 aa19.75■□□□□ 0.75
VPS16-204ENST00000417508 MRPS31Q92665 395 aaKnown RBP19.75■□□□□ 0.75
VPS16-204ENST00000417508 TRMT2BQ96GJ1 504 aaKnown RBP19.75■□□□□ 0.75
VPS16-204ENST00000417508 MYRFLQ96LU7 910 aa19.75■□□□□ 0.75
VPS16-204ENST00000417508 LRRC3BQ96PB8 259 aa19.75■□□□□ 0.75
VPS16-204ENST00000417508 USP25Q9UHP3 1055 aa19.75■□□□□ 0.75
VPS16-204ENST00000417508 CDH9Q9ULB4 789 aa19.75■□□□□ 0.75
VPS16-204ENST00000417508 ZNF292O60281 2723 aa19.75■□□□□ 0.75
VPS16-204ENST00000417508 MYO15AQ9UKN7 3530 aa19.74■□□□□ 0.75
VPS16-204ENST00000417508 MYBPHLA2RUH7 354 aa19.74■□□□□ 0.75
VPS16-204ENST00000417508 CHRNB1P11230 501 aa19.74■□□□□ 0.75
VPS16-204ENST00000417508 TNNI1P19237 187 aa19.74■□□□□ 0.75
VPS16-204ENST00000417508 ACAT1P24752 427 aaKnown RBP19.74■□□□□ 0.75
VPS16-204ENST00000417508 CYP2F1P24903 491 aa19.74■□□□□ 0.75
VPS16-204ENST00000417508 CCR3P51677 355 aa19.74■□□□□ 0.75
VPS16-204ENST00000417508 CDR1P51861 262 aa19.74■□□□□ 0.75
VPS16-204ENST00000417508 DNM1Q05193 864 aaKnown RBP19.74■□□□□ 0.75
VPS16-204ENST00000417508 CYP24A1Q07973 514 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms