RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 ANKRD63C9JTQ0 380 aa19.44■□□□□ 0.7
VCP-202ENST00000417448 PODXLO00592 558 aa19.44■□□□□ 0.7
VCP-202ENST00000417448 PRPF6O94906 941 aaKnown RBP19.44■□□□□ 0.7
VCP-202ENST00000417448 VNN2O95498 520 aa19.44■□□□□ 0.7
VCP-202ENST00000417448 GAP43P17677 238 aa19.44■□□□□ 0.7
VCP-202ENST00000417448 MATR3P43243 847 aaKnown RBP eCLIP19.44■□□□□ 0.7
VCP-202ENST00000417448 AMPD3Q01432 767 aa19.44■□□□□ 0.7
VCP-202ENST00000417448 RING1Q06587 406 aa19.44■□□□□ 0.7
VCP-202ENST00000417448 TNK2Q07912 1038 aa19.44■□□□□ 0.7
VCP-202ENST00000417448 DCAF4L1Q3SXM0 396 aa19.44■□□□□ 0.7
VCP-202ENST00000417448 PLK5Q496M5 336 aa19.44■□□□□ 0.7
VCP-202ENST00000417448 CTXN3Q4LDR2 81 aa19.44■□□□□ 0.7
VCP-202ENST00000417448 LRSAM1Q6UWE0 723 aa19.44■□□□□ 0.7
VCP-202ENST00000417448 KRBA2Q6ZNG9 492 aa19.44■□□□□ 0.7
VCP-202ENST00000417448 ARID3BQ8IVW6 561 aaPredicted RBP19.44■□□□□ 0.7
VCP-202ENST00000417448 CCDC65Q8IXS2 484 aa19.44■□□□□ 0.7
VCP-202ENST00000417448 FMR1NBQ8N0W7 255 aaPredicted RBP19.44■□□□□ 0.7
VCP-202ENST00000417448 FAM200AQ8TCP9 573 aa19.44■□□□□ 0.7
VCP-202ENST00000417448 ZMAT2Q96NC0 199 aaKnown RBP19.44■□□□□ 0.7
VCP-202ENST00000417448 CDT1Q9H211 546 aa19.44■□□□□ 0.7
VCP-202ENST00000417448 AFF4Q9UHB7 1163 aaKnown RBP19.44■□□□□ 0.7
VCP-202ENST00000417448 TNFSF13BQ9Y275 285 aa19.44■□□□□ 0.7
VCP-202ENST00000417448 TMEM8BA6NDV4 472 aa19.43■□□□□ 0.7
VCP-202ENST00000417448 SOBPA7XYQ1 873 aa19.43■□□□□ 0.7
VCP-202ENST00000417448 H7C4K7 107 aa19.43■□□□□ 0.7
VCP-202ENST00000417448 ABLIM1O14639 778 aa19.43■□□□□ 0.7
VCP-202ENST00000417448 PRPF40AO75400 957 aaKnown RBP19.43■□□□□ 0.7
VCP-202ENST00000417448 GCNT3O95395 438 aa19.43■□□□□ 0.7
VCP-202ENST00000417448 GTF2BQ00403 316 aa19.43■□□□□ 0.7
VCP-202ENST00000417448 ZNF568Q3ZCX4 644 aa19.43■□□□□ 0.7
VCP-202ENST00000417448 XKR4Q5GH76 650 aa19.43■□□□□ 0.7
VCP-202ENST00000417448 SH3PXD2AQ5TCZ1 1133 aa19.43■□□□□ 0.7
VCP-202ENST00000417448 SLC39A4Q6P5W5 647 aa19.43■□□□□ 0.7
VCP-202ENST00000417448 RNF19BQ6ZMZ0 732 aa19.43■□□□□ 0.7
VCP-202ENST00000417448 ENGASEQ8NFI3 743 aa19.43■□□□□ 0.7
VCP-202ENST00000417448 ERCC4Q92889 916 aaPredicted RBP19.43■□□□□ 0.7
VCP-202ENST00000417448 LRRC27Q9C0I9 530 aa19.43■□□□□ 0.7
VCP-202ENST00000417448 GPR88Q9GZN0 384 aa19.43■□□□□ 0.7
VCP-202ENST00000417448 DNAJC25Q9H1X3 360 aa19.43■□□□□ 0.7
VCP-202ENST00000417448 PTPRHQ9HD43 1115 aa19.43■□□□□ 0.7
VCP-202ENST00000417448 YIPF1Q9Y548 306 aa19.43■□□□□ 0.7
VCP-202ENST00000417448 ANK1P16157 1881 aa19.43■□□□□ 0.7
VCP-202ENST00000417448 MYO16Q9Y6X6 1858 aa19.43■□□□□ 0.7
VCP-202ENST00000417448 KLRC4O43908 158 aa19.42■□□□□ 0.7
VCP-202ENST00000417448 ALKAL1Q6UXT8 129 aa19.42■□□□□ 0.7
VCP-202ENST00000417448 CHFRQ96EP1 664 aa19.42■□□□□ 0.7
VCP-202ENST00000417448 PYM1Q9BRP8 204 aaKnown RBP19.42■□□□□ 0.7
VCP-202ENST00000417448 SCNM1Q9BWG6 230 aa19.42■□□□□ 0.7
VCP-202ENST00000417448 DUSP15Q9H1R2 295 aaPredicted RBP19.42■□□□□ 0.7
VCP-202ENST00000417448 CRISPLD1Q9H336 500 aa19.42■□□□□ 0.7
VCP-202ENST00000417448 MAGEF1Q9HAY2 307 aa19.42■□□□□ 0.7
VCP-202ENST00000417448 SLC39A2Q9NP94 309 aa19.42■□□□□ 0.7
VCP-202ENST00000417448 KCNG1Q9UIX4 513 aa19.42■□□□□ 0.7
VCP-202ENST00000417448 LHX6Q9UPM6 363 aa19.42■□□□□ 0.7
VCP-202ENST00000417448 ABCA7Q8IZY2 2146 aa19.42■□□□□ 0.7
VCP-202ENST00000417448 KIAA1549LQ6ZVL6 1849 aa19.41■□□□□ 0.7
VCP-202ENST00000417448 ASCC3Q8N3C0 2202 aaKnown RBP19.41■□□□□ 0.7
VCP-202ENST00000417448 LNP1A1A4G5 178 aa19.41■□□□□ 0.7
VCP-202ENST00000417448 PPP1R37O75864 691 aa19.41■□□□□ 0.7
VCP-202ENST00000417448 AKAP3O75969 853 aa19.41■□□□□ 0.7
VCP-202ENST00000417448 PROZP22891 400 aa19.41■□□□□ 0.7
VCP-202ENST00000417448 LIG4P49917 911 aa19.41■□□□□ 0.7
VCP-202ENST00000417448 ARHGAP29Q52LW3 1261 aa19.41■□□□□ 0.7
VCP-202ENST00000417448 ZNF280DQ6N043 979 aa19.41■□□□□ 0.7
VCP-202ENST00000417448 MPZL3Q6UWV2 235 aa19.41■□□□□ 0.7
VCP-202ENST00000417448 UNC13DQ70J99 1090 aa19.41■□□□□ 0.7
VCP-202ENST00000417448 TMEM130Q8N3G9 435 aa19.41■□□□□ 0.7
VCP-202ENST00000417448 ZCCHC14Q8WYQ9 949 aaKnown RBP19.41■□□□□ 0.7
VCP-202ENST00000417448 STRA6Q9BX79 667 aa19.41■□□□□ 0.7
VCP-202ENST00000417448 SEL1LQ9UBV2 794 aa19.41■□□□□ 0.7
VCP-202ENST00000417448 USP25Q9UHP3 1055 aa19.41■□□□□ 0.7
VCP-202ENST00000417448 H0YCG3 227 aa19.4■□□□□ 0.7
VCP-202ENST00000417448 HNRNPDLO14979 420 aaKnown RBP19.4■□□□□ 0.7
VCP-202ENST00000417448 MEFVO15553 781 aaPredicted RBP19.4■□□□□ 0.7
VCP-202ENST00000417448 PRAMEF12O95522 483 aa19.4■□□□□ 0.7
VCP-202ENST00000417448 CPB1P15086 417 aa19.4■□□□□ 0.7
VCP-202ENST00000417448 HOXD13P35453 343 aa19.4■□□□□ 0.7
VCP-202ENST00000417448 PNOCQ13519 176 aa19.4■□□□□ 0.7
VCP-202ENST00000417448 KMT5BQ4FZB7 885 aa19.4■□□□□ 0.7
VCP-202ENST00000417448 FSTL4Q6MZW2 842 aa19.4■□□□□ 0.7
VCP-202ENST00000417448 CNNM4Q6P4Q7 775 aa19.4■□□□□ 0.7
VCP-202ENST00000417448 GAREM2Q75VX8 874 aa19.4■□□□□ 0.7
VCP-202ENST00000417448 ZSWIM2Q8NEG5 633 aa19.4■□□□□ 0.7
VCP-202ENST00000417448 BEST2Q8NFU1 509 aa19.4■□□□□ 0.7
VCP-202ENST00000417448 C18orf25Q96B23 403 aaPredicted RBP19.4■□□□□ 0.7
VCP-202ENST00000417448 SUSD3Q96L08 255 aa19.4■□□□□ 0.7
VCP-202ENST00000417448 MAFFQ9ULX9 164 aa19.4■□□□□ 0.7
VCP-202ENST00000417448 DCLK1O15075 740 aa19.39■□□□□ 0.69
VCP-202ENST00000417448 TOM1L1O75674 476 aa19.39■□□□□ 0.69
VCP-202ENST00000417448 OR4Q2P0C623 313 aa19.39■□□□□ 0.69
VCP-202ENST00000417448 TNFSF9P41273 254 aa19.39■□□□□ 0.69
VCP-202ENST00000417448 CREB5Q02930 508 aa19.39■□□□□ 0.69
VCP-202ENST00000417448 FAM160A1Q05DH4 1040 aa19.39■□□□□ 0.69
VCP-202ENST00000417448 FAM26FQ5R3K3 315 aa19.39■□□□□ 0.69
VCP-202ENST00000417448 L1TD1Q5T7N2 865 aaKnown RBP19.39■□□□□ 0.69
VCP-202ENST00000417448 NELFCDQ8IXH7 590 aa19.39■□□□□ 0.69
VCP-202ENST00000417448 PGLYRP2Q96PD5 576 aa19.39■□□□□ 0.69
VCP-202ENST00000417448 ACCSQ96QU6 501 aa19.39■□□□□ 0.69
VCP-202ENST00000417448 HHIPQ96QV1 700 aa19.39■□□□□ 0.69
VCP-202ENST00000417448 TMEM209Q96SK2 561 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms