RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 GOLPH3Q9H4A6 298 aa18.04■□□□□ 0.48
PHRF1-202ENST00000413872 TMEM51Q9NW97 253 aa18.04■□□□□ 0.48
PHRF1-202ENST00000413872 ADAM21Q9UKJ8 722 aa18.04■□□□□ 0.48
PHRF1-202ENST00000413872 SLC4A7Q9Y6M7 1214 aa18.04■□□□□ 0.48
PHRF1-202ENST00000413872 F5H5T6 163 aa18.04■□□□□ 0.48
PHRF1-202ENST00000413872 FNTAP49354 379 aa18.04■□□□□ 0.48
PHRF1-202ENST00000413872 DDIASQ8IXT1 998 aa18.04■□□□□ 0.48
PHRF1-202ENST00000413872 NRBF2Q96F24 287 aa18.04■□□□□ 0.48
PHRF1-202ENST00000413872 ASB7Q9H672 318 aa18.04■□□□□ 0.48
PHRF1-202ENST00000413872 SUDS3Q9H7L9 328 aaPredicted RBP18.04■□□□□ 0.48
PHRF1-202ENST00000413872 AK9Q5TCS8 1911 aa18.04■□□□□ 0.48
PHRF1-202ENST00000413872 CCDC195A0A1B0GUA6 201 aa18.04■□□□□ 0.48
PHRF1-202ENST00000413872 FGFR4P22455 802 aa18.04■□□□□ 0.48
PHRF1-202ENST00000413872 ABCE1P61221 599 aaKnown RBP18.04■□□□□ 0.48
PHRF1-202ENST00000413872 USP10Q14694 798 aaKnown RBP18.04■□□□□ 0.48
PHRF1-202ENST00000413872 CDK5RAP1Q96SZ6 601 aaKnown RBP18.04■□□□□ 0.48
PHRF1-202ENST00000413872 VIPAS39Q9H9C1 493 aa18.04■□□□□ 0.48
PHRF1-202ENST00000413872 GPRC5DQ9NZD1 345 aa18.04■□□□□ 0.48
PHRF1-202ENST00000413872 PTPRAP18433 802 aa18.03■□□□□ 0.48
PHRF1-202ENST00000413872 YY1P25490 414 aa18.03■□□□□ 0.48
PHRF1-202ENST00000413872 RARRES1P49788 294 aa18.03■□□□□ 0.48
PHRF1-202ENST00000413872 TFB1MQ8WVM0 346 aaKnown RBP18.03■□□□□ 0.48
PHRF1-202ENST00000413872 CINPQ9BW66 212 aaPredicted RBP18.03■□□□□ 0.48
PHRF1-202ENST00000413872 GPR63Q9BZJ6 419 aa18.03■□□□□ 0.48
PHRF1-202ENST00000413872 SLC7A5P2Q9GIP4 190 aa18.03■□□□□ 0.48
PHRF1-202ENST00000413872 CASS4Q9NQ75 786 aa18.03■□□□□ 0.48
PHRF1-202ENST00000413872 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.03■□□□□ 0.48
PHRF1-202ENST00000413872 FOXN3O00409 490 aaPredicted RBP18.03■□□□□ 0.48
PHRF1-202ENST00000413872 TRPA1O75762 1119 aa18.03■□□□□ 0.48
PHRF1-202ENST00000413872 ALDH2P05091 517 aa18.03■□□□□ 0.48
PHRF1-202ENST00000413872 FBXO47Q5MNV8 452 aa18.03■□□□□ 0.48
PHRF1-202ENST00000413872 RASIP1Q5U651 963 aa18.03■□□□□ 0.48
PHRF1-202ENST00000413872 ACOT1Q86TX2 421 aa18.03■□□□□ 0.48
PHRF1-202ENST00000413872 RIBC1Q8N443 379 aaPredicted RBP18.03■□□□□ 0.48
PHRF1-202ENST00000413872 SLC26A7Q8TE54 656 aa18.03■□□□□ 0.48
PHRF1-202ENST00000413872 CYFIP2Q96F07 1278 aa18.03■□□□□ 0.48
PHRF1-202ENST00000413872 PCDHB12Q9Y5F1 795 aa18.03■□□□□ 0.48
PHRF1-202ENST00000413872 H0Y626 953 aa18.03■□□□□ 0.48
PHRF1-202ENST00000413872 C2CD2LO14523 706 aa18.03■□□□□ 0.48
PHRF1-202ENST00000413872 E2F6O75461 281 aa18.03■□□□□ 0.48
PHRF1-202ENST00000413872 CABYRO75952 493 aa18.03■□□□□ 0.48
PHRF1-202ENST00000413872 CYP3A4P08684 503 aa18.03■□□□□ 0.48
PHRF1-202ENST00000413872 PTGER2P43116 358 aa18.03■□□□□ 0.48
PHRF1-202ENST00000413872 GEMP55040 296 aa18.03■□□□□ 0.48
PHRF1-202ENST00000413872 BEND6Q5SZJ8 279 aaPredicted RBP18.03■□□□□ 0.48
PHRF1-202ENST00000413872 TLK2Q86UE8 772 aa18.03■□□□□ 0.48
PHRF1-202ENST00000413872 TTC30BQ8N4P2 665 aa18.03■□□□□ 0.48
PHRF1-202ENST00000413872 LZICQ8WZA0 190 aa18.03■□□□□ 0.48
PHRF1-202ENST00000413872 RPRD1AQ96P16 312 aaPredicted RBP18.03■□□□□ 0.48
PHRF1-202ENST00000413872 RANBP17Q9H2T7 1088 aaKnown RBP18.03■□□□□ 0.48
PHRF1-202ENST00000413872 LATS2Q9NRM7 1088 aa18.03■□□□□ 0.48
PHRF1-202ENST00000413872 PKP3Q9Y446 797 aa18.03■□□□□ 0.48
PHRF1-202ENST00000413872 KITP10721 976 aa18.03■□□□□ 0.48
PHRF1-202ENST00000413872 MAP2K2P36507 400 aa18.03■□□□□ 0.48
PHRF1-202ENST00000413872 INPP1P49441 399 aa18.03■□□□□ 0.48
PHRF1-202ENST00000413872 TIGD7Q6NT04 549 aaPredicted RBP18.03■□□□□ 0.48
PHRF1-202ENST00000413872 SLC30A10Q6XR72 485 aa18.03■□□□□ 0.48
PHRF1-202ENST00000413872 PPIL6Q8IXY8 311 aa18.03■□□□□ 0.48
PHRF1-202ENST00000413872 OSMRQ99650 979 aa18.03■□□□□ 0.48
PHRF1-202ENST00000413872 ROPN1BQ9BZX4 212 aaPredicted RBP18.03■□□□□ 0.48
PHRF1-202ENST00000413872 ROPN1Q9HAT0 212 aaPredicted RBP18.03■□□□□ 0.48
PHRF1-202ENST00000413872 XPNPEP3Q9NQH7 507 aa18.03■□□□□ 0.48
PHRF1-202ENST00000413872 SETD4Q9NVD3 440 aa18.03■□□□□ 0.48
PHRF1-202ENST00000413872 MSCO60682 206 aa18.02■□□□□ 0.48
PHRF1-202ENST00000413872 NPM3O75607 178 aaKnown RBP18.02■□□□□ 0.48
PHRF1-202ENST00000413872 MFSD10Q14728 455 aa18.02■□□□□ 0.48
PHRF1-202ENST00000413872 POLD3Q15054 466 aaPredicted RBP18.02■□□□□ 0.48
PHRF1-202ENST00000413872 RIOX2Q8IUF8 465 aa18.02■□□□□ 0.48
PHRF1-202ENST00000413872 DNAJC7Q99615 494 aa18.02■□□□□ 0.48
PHRF1-202ENST00000413872 MRPL9Q9BYD2 267 aaKnown RBP18.02■□□□□ 0.48
PHRF1-202ENST00000413872 TBC1D12O60347 775 aa18.02■□□□□ 0.48
PHRF1-202ENST00000413872 AARSP49588 968 aaKnown RBP eCLIP18.02■□□□□ 0.484e-41■■■□□ 15
PHRF1-202ENST00000413872 SEZ6Q53EL9 994 aa18.02■□□□□ 0.48
PHRF1-202ENST00000413872 SLC27A1Q6PCB7 646 aa18.02■□□□□ 0.48
PHRF1-202ENST00000413872 USP38Q8NB14 1042 aa18.02■□□□□ 0.48
PHRF1-202ENST00000413872 HMX1Q9NP08 348 aaPredicted RBP18.02■□□□□ 0.48
PHRF1-202ENST00000413872 ENTPD7Q9NQZ7 604 aa18.02■□□□□ 0.48
PHRF1-202ENST00000413872 CYP11B1P15538 503 aa18.02■□□□□ 0.48
PHRF1-202ENST00000413872 EPC2Q52LR7 807 aa18.02■□□□□ 0.48
PHRF1-202ENST00000413872 PTRHD1Q6GMV3 140 aaKnown RBP18.02■□□□□ 0.48
PHRF1-202ENST00000413872 CCNJLQ8IV13 435 aa18.02■□□□□ 0.48
PHRF1-202ENST00000413872 IPMKQ8NFU5 416 aa18.02■□□□□ 0.48
PHRF1-202ENST00000413872 SGSM3Q96HU1 749 aa18.02■□□□□ 0.48
PHRF1-202ENST00000413872 MS4A14Q96JA4 679 aa18.02■□□□□ 0.48
PHRF1-202ENST00000413872 TRIM51Q9BSJ1 452 aa18.02■□□□□ 0.48
PHRF1-202ENST00000413872 EPHB3P54753 998 aa18.02■□□□□ 0.47
PHRF1-202ENST00000413872 ITIH5Q86UX2 942 aa18.02■□□□□ 0.47
PHRF1-202ENST00000413872 DCTN4Q9UJW0 460 aa18.02■□□□□ 0.47
PHRF1-202ENST00000413872 LY6KQ17RY6 165 aa18.01■□□□□ 0.47
PHRF1-202ENST00000413872 GJB7Q6PEY0 223 aa18.01■□□□□ 0.47
PHRF1-202ENST00000413872 TPCN2Q8NHX9 752 aa18.01■□□□□ 0.47
PHRF1-202ENST00000413872 ZSWIM1Q9BR11 485 aa18.01■□□□□ 0.47
PHRF1-202ENST00000413872 ERP44Q9BS26 406 aa18.01■□□□□ 0.47
PHRF1-202ENST00000413872 ATMINO43313 823 aaPredicted RBP18.01■□□□□ 0.47
PHRF1-202ENST00000413872 ZNF286BP0CG31 522 aa18.01■□□□□ 0.47
PHRF1-202ENST00000413872 SERPINB4P48594 390 aa18.01■□□□□ 0.47
PHRF1-202ENST00000413872 KLK7P49862 253 aa18.01■□□□□ 0.47
PHRF1-202ENST00000413872 ACVR2BQ13705 512 aa18.01■□□□□ 0.47
PHRF1-202ENST00000413872 PDCD2Q16342 344 aaPredicted RBP18.01■□□□□ 0.47
PHRF1-202ENST00000413872 TMEM176AQ96HP8 235 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms