RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 MYBPHLA2RUH7 354 aa15.86■□□□□ 0.13
LIMS4-201ENST00000413601 MAPK13O15264 365 aa15.86■□□□□ 0.13
LIMS4-201ENST00000413601 CLSTN1O94985 981 aa15.86■□□□□ 0.13
LIMS4-201ENST00000413601 STAU1O95793 577 aaKnown RBP15.86■□□□□ 0.13
LIMS4-201ENST00000413601 PDGFRBP09619 1106 aa15.86■□□□□ 0.13
LIMS4-201ENST00000413601 CYP2F1P24903 491 aa15.86■□□□□ 0.13
LIMS4-201ENST00000413601 ATICP31939 592 aa15.86■□□□□ 0.13
LIMS4-201ENST00000413601 GPR15P49685 360 aa15.86■□□□□ 0.13
LIMS4-201ENST00000413601 VAMP7P51809 220 aa15.86■□□□□ 0.13
LIMS4-201ENST00000413601 PSMC1P62191 440 aaKnown RBP15.86■□□□□ 0.13
LIMS4-201ENST00000413601 NCOA4Q13772 614 aa15.86■□□□□ 0.13
LIMS4-201ENST00000413601 FAM78AQ5JUQ0 283 aa15.86■□□□□ 0.13
LIMS4-201ENST00000413601 C1orf220Q5T0J3 134 aa15.86■□□□□ 0.13
LIMS4-201ENST00000413601 ISM2Q6H9L7 571 aa15.86■□□□□ 0.13
LIMS4-201ENST00000413601 ITIH5Q86UX2 942 aa15.86■□□□□ 0.13
LIMS4-201ENST00000413601 FAM186BQ8IYM0 893 aa15.86■□□□□ 0.13
LIMS4-201ENST00000413601 SYAP1Q96A49 352 aaPredicted RBP15.86■□□□□ 0.13
LIMS4-201ENST00000413601 EEF2KMTQ96G04 330 aa15.86■□□□□ 0.13
LIMS4-201ENST00000413601 SYT15Q9BQS2 421 aa15.86■□□□□ 0.13
LIMS4-201ENST00000413601 PLA2G2FQ9BZM2 168 aa15.86■□□□□ 0.13
LIMS4-201ENST00000413601 TICRRQ7Z2Z1 1910 aa15.86■□□□□ 0.13
LIMS4-201ENST00000413601 IKBKBO14920 756 aa15.85■□□□□ 0.13
LIMS4-201ENST00000413601 TACC1O75410 805 aa15.85■□□□□ 0.13
LIMS4-201ENST00000413601 PSMC2P35998 433 aaKnown RBP15.85■□□□□ 0.13
LIMS4-201ENST00000413601 GNL1P36915 607 aaPredicted RBP15.85■□□□□ 0.13
LIMS4-201ENST00000413601 VCPP55072 806 aaKnown RBP15.85■□□□□ 0.13
LIMS4-201ENST00000413601 GPC5P78333 572 aa15.85■□□□□ 0.13
LIMS4-201ENST00000413601 VEPH1Q14D04 833 aa15.85■□□□□ 0.13
LIMS4-201ENST00000413601 TAF12Q16514 161 aa15.85■□□□□ 0.13
LIMS4-201ENST00000413601 ZNF699Q32M78 642 aa15.85■□□□□ 0.13
LIMS4-201ENST00000413601 EDRF1Q3B7T1 1238 aa15.85■□□□□ 0.13
LIMS4-201ENST00000413601 ZACNQ401N2 412 aa15.85■□□□□ 0.13
LIMS4-201ENST00000413601 SDHAF4Q5VUM1 108 aa15.85■□□□□ 0.13
LIMS4-201ENST00000413601 TANGO2Q6ICL3 276 aa15.85■□□□□ 0.13
LIMS4-201ENST00000413601 FAM171BQ6P995 826 aa15.85■□□□□ 0.13
LIMS4-201ENST00000413601 GAREM2Q75VX8 874 aa15.85■□□□□ 0.13
LIMS4-201ENST00000413601 SV2AQ7L0J3 742 aa15.85■□□□□ 0.13
LIMS4-201ENST00000413601 SPATA2LQ8IUW3 424 aaPredicted RBP15.85■□□□□ 0.13
LIMS4-201ENST00000413601 ELOA2Q8IYF1 753 aaPredicted RBP15.85■□□□□ 0.13
LIMS4-201ENST00000413601 SIX5Q8N196 739 aa15.85■□□□□ 0.13
LIMS4-201ENST00000413601 STKLD1Q8NE28 680 aa15.85■□□□□ 0.13
LIMS4-201ENST00000413601 OR6B3Q8NGW1 331 aa15.85■□□□□ 0.13
LIMS4-201ENST00000413601 SNX25Q9H3E2 840 aa15.85■□□□□ 0.13
LIMS4-201ENST00000413601 MFSD1Q9H3U5 465 aa15.85■□□□□ 0.13
LIMS4-201ENST00000413601 ABCB6Q9NP58 842 aa15.85■□□□□ 0.13
LIMS4-201ENST00000413601 CRTAC1Q9NQ79 661 aa15.85■□□□□ 0.13
LIMS4-201ENST00000413601 WNT16Q9UBV4 365 aa15.85■□□□□ 0.13
LIMS4-201ENST00000413601 CDH9Q9ULB4 789 aa15.85■□□□□ 0.13
LIMS4-201ENST00000413601 CA14Q9ULX7 337 aa15.85■□□□□ 0.13
LIMS4-201ENST00000413601 NME7Q9Y5B8 376 aa15.85■□□□□ 0.13
LIMS4-201ENST00000413601 MIA3Q5JRA6 1907 aa15.84■□□□□ 0.13
LIMS4-201ENST00000413601 COL4A3Q01955 1670 aa15.84■□□□□ 0.13
LIMS4-201ENST00000413601 KRBA1A5PL33 1030 aa15.84■□□□□ 0.13
LIMS4-201ENST00000413601 ECI2O75521 394 aa15.84■□□□□ 0.13
LIMS4-201ENST00000413601 TRIM49P0CI25 452 aa15.84■□□□□ 0.13
LIMS4-201ENST00000413601 TRIM49CP0CI26 452 aa15.84■□□□□ 0.13
LIMS4-201ENST00000413601 KRT13P13646 458 aa15.84■□□□□ 0.13
LIMS4-201ENST00000413601 FCARP24071 287 aa15.84■□□□□ 0.13
LIMS4-201ENST00000413601 GABRR2P28476 465 aa15.84■□□□□ 0.13
LIMS4-201ENST00000413601 DDR2Q16832 855 aa15.84■□□□□ 0.13
LIMS4-201ENST00000413601 COBLL1Q53SF7 1204 aa15.84■□□□□ 0.13
LIMS4-201ENST00000413601 ZNF667Q5HYK9 610 aa15.84■□□□□ 0.13
LIMS4-201ENST00000413601 STXBP5Q5T5C0 1151 aa15.84■□□□□ 0.13
LIMS4-201ENST00000413601 INTS8Q75QN2 995 aaKnown RBP15.84■□□□□ 0.13
LIMS4-201ENST00000413601 ADSSL1Q8N142 457 aa15.84■□□□□ 0.13
LIMS4-201ENST00000413601 ZSCAN18Q8TBC5 510 aaPredicted RBP15.84■□□□□ 0.13
LIMS4-201ENST00000413601 ASB16Q96NS5 453 aa15.84■□□□□ 0.13
LIMS4-201ENST00000413601 ATXN3LQ9H3M9 355 aa15.84■□□□□ 0.13
LIMS4-201ENST00000413601 SLITRK6Q9H5Y7 841 aa15.84■□□□□ 0.13
LIMS4-201ENST00000413601 VRTNQ9H8Y1 702 aa15.84■□□□□ 0.13
LIMS4-201ENST00000413601 ZFP14Q9HCL3 533 aa15.84■□□□□ 0.13
LIMS4-201ENST00000413601 SLC2A4RGQ9NR83 387 aa15.84■□□□□ 0.13
LIMS4-201ENST00000413601 MAN1B1Q9UKM7 699 aa15.84■□□□□ 0.13
LIMS4-201ENST00000413601 KIF26AQ9ULI4 1882 aaPredicted RBP15.84■□□□□ 0.13
LIMS4-201ENST00000413601 FGF19O95750 216 aa15.83■□□□□ 0.12
LIMS4-201ENST00000413601 FAM163BP0C2L3 166 aa15.83■□□□□ 0.12
LIMS4-201ENST00000413601 AVPR2P30518 371 aa15.83■□□□□ 0.12
LIMS4-201ENST00000413601 RAP1GAPP47736 663 aa15.83■□□□□ 0.12
LIMS4-201ENST00000413601 GCLMP48507 274 aa15.83■□□□□ 0.12
LIMS4-201ENST00000413601 PMS1P54277 932 aaKnown RBP15.83■□□□□ 0.12
LIMS4-201ENST00000413601 CDH8P55286 799 aa15.83■□□□□ 0.12
LIMS4-201ENST00000413601 RPL10AP62906 217 aaKnown RBP15.83■□□□□ 0.12
LIMS4-201ENST00000413601 PPP3CAQ08209 521 aa15.83■□□□□ 0.12
LIMS4-201ENST00000413601 SGSM1Q2NKQ1 1148 aa15.83■□□□□ 0.12
LIMS4-201ENST00000413601 CFAP221Q4G0U5 840 aa15.83■□□□□ 0.12
LIMS4-201ENST00000413601 IER5LQ5T953 404 aa15.83■□□□□ 0.12
LIMS4-201ENST00000413601 ANKRD40Q6AI12 368 aa15.83■□□□□ 0.12
LIMS4-201ENST00000413601 SCARA5Q6ZMJ2 495 aa15.83■□□□□ 0.12
LIMS4-201ENST00000413601 GPIHBP1Q8IV16 184 aa15.83■□□□□ 0.12
LIMS4-201ENST00000413601 FLCNQ8NFG4 579 aa15.83■□□□□ 0.12
LIMS4-201ENST00000413601 SMARCD2Q92925 531 aa15.83■□□□□ 0.12
LIMS4-201ENST00000413601 MYLPFQ96A32 169 aa15.83■□□□□ 0.12
LIMS4-201ENST00000413601 ELSPBP1Q96BH3 223 aa15.83■□□□□ 0.12
LIMS4-201ENST00000413601 GPR88Q9GZN0 384 aa15.83■□□□□ 0.12
LIMS4-201ENST00000413601 DPEP3Q9H4B8 488 aa15.83■□□□□ 0.12
LIMS4-201ENST00000413601 SMYD3Q9H7B4 428 aa15.83■□□□□ 0.12
LIMS4-201ENST00000413601 MMRN2Q9H8L6 949 aa15.83■□□□□ 0.12
LIMS4-201ENST00000413601 IL21Q9HBE4 155 aa15.83■□□□□ 0.12
LIMS4-201ENST00000413601 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.83■□□□□ 0.12
LIMS4-201ENST00000413601 MAGEC2Q9UBF1 373 aaPredicted RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms