RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 KLHL40Q2TBA0 621 aa14.07□□□□□ -0.16
HDAC8-210ENST00000412342 CFAP221Q4G0U5 840 aa14.07□□□□□ -0.16
HDAC8-210ENST00000412342 C11orf57Q6ZUT1 292 aaPredicted RBP14.07□□□□□ -0.16
HDAC8-210ENST00000412342 GJD3Q8N144 294 aa14.07□□□□□ -0.16
HDAC8-210ENST00000412342 OR6B3Q8NGW1 331 aa14.07□□□□□ -0.16
HDAC8-210ENST00000412342 LMO3Q8TAP4 145 aa14.07□□□□□ -0.16
HDAC8-210ENST00000412342 MYLPFQ96A32 169 aa14.07□□□□□ -0.16
HDAC8-210ENST00000412342 FAXDC2Q96IV6 333 aa14.07□□□□□ -0.16
HDAC8-210ENST00000412342 LPIN3Q9BQK8 851 aa14.07□□□□□ -0.16
HDAC8-210ENST00000412342 LRRC3Q9BY71 257 aa14.07□□□□□ -0.16
HDAC8-210ENST00000412342 NIF3L1Q9GZT8 377 aa14.07□□□□□ -0.16
HDAC8-210ENST00000412342 PIDD1Q9HB75 910 aa14.07□□□□□ -0.16
HDAC8-210ENST00000412342 ABCB6Q9NP58 842 aa14.07□□□□□ -0.16
HDAC8-210ENST00000412342 AVENQ9NQS1 362 aaPredicted RBP14.07□□□□□ -0.16
HDAC8-210ENST00000412342 HMGXB4Q9UGU5 601 aa14.07□□□□□ -0.16
HDAC8-210ENST00000412342 PCDHB5Q9Y5E4 795 aa14.07□□□□□ -0.16
HDAC8-210ENST00000412342 CUL9Q8IWT3 2517 aa14.06□□□□□ -0.16
HDAC8-210ENST00000412342 DENND4CQ5VZ89 1909 aa14.06□□□□□ -0.16
HDAC8-210ENST00000412342 P4HA2O15460 535 aa14.06□□□□□ -0.16
HDAC8-210ENST00000412342 PDGFRBP09619 1106 aa14.06□□□□□ -0.16
HDAC8-210ENST00000412342 CCDC192P0DO97 292 aa14.06□□□□□ -0.16
HDAC8-210ENST00000412342 P4HA1P13674 534 aa14.06□□□□□ -0.16
HDAC8-210ENST00000412342 KCNH2Q12809 1159 aa14.06□□□□□ -0.16
HDAC8-210ENST00000412342 SLC5A9Q2M3M2 681 aa14.06□□□□□ -0.16
HDAC8-210ENST00000412342 PRSS36Q5K4E3 855 aa14.06□□□□□ -0.16
HDAC8-210ENST00000412342 CAVIN1Q6NZI2 390 aaKnown RBP14.06□□□□□ -0.16
HDAC8-210ENST00000412342 POTEHQ6S545 545 aa14.06□□□□□ -0.16
HDAC8-210ENST00000412342 TMC8Q8IU68 726 aa14.06□□□□□ -0.16
HDAC8-210ENST00000412342 MYCBPAPQ8TBZ2 947 aa14.06□□□□□ -0.16
HDAC8-210ENST00000412342 WHAMMQ8TF30 809 aa14.06□□□□□ -0.16
HDAC8-210ENST00000412342 TATDN2Q93075 761 aa14.06□□□□□ -0.16
HDAC8-210ENST00000412342 PCED1BQ96HM7 432 aa14.06□□□□□ -0.16
HDAC8-210ENST00000412342 FUBP3Q96I24 572 aaKnown RBP eCLIP14.06□□□□□ -0.16
HDAC8-210ENST00000412342 RPGRIP1Q96KN7 1286 aa14.06□□□□□ -0.16
HDAC8-210ENST00000412342 TWNKQ96RR1 684 aa14.06□□□□□ -0.16
HDAC8-210ENST00000412342 MYADMQ96S97 322 aa14.06□□□□□ -0.16
HDAC8-210ENST00000412342 IMPG2Q9BZV3 1241 aa14.06□□□□□ -0.16
HDAC8-210ENST00000412342 SNX25Q9H3E2 840 aa14.06□□□□□ -0.16
HDAC8-210ENST00000412342 THAP9Q9H5L6 903 aa14.06□□□□□ -0.16
HDAC8-210ENST00000412342 CYP3A43Q9HB55 503 aa14.06□□□□□ -0.16
HDAC8-210ENST00000412342 ABI2Q9NYB9 513 aaPredicted RBP14.06□□□□□ -0.16
HDAC8-210ENST00000412342 PATJQ8NI35 1801 aa14.06□□□□□ -0.16
HDAC8-210ENST00000412342 A8MXQ7 604 aa14.05□□□□□ -0.16
HDAC8-210ENST00000412342 MOSPD3O75425 235 aa14.05□□□□□ -0.16
HDAC8-210ENST00000412342 RHOP08100 348 aa14.05□□□□□ -0.16
HDAC8-210ENST00000412342 PTPN1P18031 435 aaKnown RBP14.05□□□□□ -0.16
HDAC8-210ENST00000412342 SP100P23497 879 aaPredicted RBP14.05□□□□□ -0.16
HDAC8-210ENST00000412342 CYP2F1P24903 491 aa14.05□□□□□ -0.16
HDAC8-210ENST00000412342 CCR2P41597 374 aa14.05□□□□□ -0.16
HDAC8-210ENST00000412342 TUFMP49411 452 aaKnown RBP14.05□□□□□ -0.16
HDAC8-210ENST00000412342 GPR15P49685 360 aa14.05□□□□□ -0.16
HDAC8-210ENST00000412342 NDST1P52848 882 aa14.05□□□□□ -0.16
HDAC8-210ENST00000412342 PLD1Q13393 1074 aa14.05□□□□□ -0.16
HDAC8-210ENST00000412342 STX1AQ16623 288 aa14.05□□□□□ -0.16
HDAC8-210ENST00000412342 PABPC1LQ4VXU2 614 aaKnown RBP14.05□□□□□ -0.16
HDAC8-210ENST00000412342 SASS6Q6UVJ0 657 aa14.05□□□□□ -0.16
HDAC8-210ENST00000412342 UNC93AQ86WB7 457 aa14.05□□□□□ -0.16
HDAC8-210ENST00000412342 UBR7Q8N806 425 aa14.05□□□□□ -0.16
HDAC8-210ENST00000412342 B3GALNT2Q8NCR0 500 aa14.05□□□□□ -0.16
HDAC8-210ENST00000412342 ITFG1Q8TB96 612 aa14.05□□□□□ -0.16
HDAC8-210ENST00000412342 ENOX1Q8TC92 643 aaKnown RBP14.05□□□□□ -0.16
HDAC8-210ENST00000412342 KHSRPQ92945 711 aaKnown RBP eCLIP14.05□□□□□ -0.16
HDAC8-210ENST00000412342 SEPT5Q99719 369 aaPredicted RBP14.05□□□□□ -0.16
HDAC8-210ENST00000412342 ARID3AQ99856 593 aa14.05□□□□□ -0.16
HDAC8-210ENST00000412342 FUCA2Q9BTY2 467 aa14.05□□□□□ -0.16
HDAC8-210ENST00000412342 ANO10Q9NW15 660 aa14.05□□□□□ -0.16
HDAC8-210ENST00000412342 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.05□□□□□ -0.16
HDAC8-210ENST00000412342 CILPO75339 1184 aa14.04□□□□□ -0.16
HDAC8-210ENST00000412342 AFPP02771 609 aaKnown RBP14.04□□□□□ -0.16
HDAC8-210ENST00000412342 PTPN2P17706 415 aa14.04□□□□□ -0.16
HDAC8-210ENST00000412342 FSHRP23945 695 aa14.04□□□□□ -0.16
HDAC8-210ENST00000412342 MAGEA11P43364 429 aa14.04□□□□□ -0.16
HDAC8-210ENST00000412342 TYRO3Q06418 890 aa14.04□□□□□ -0.16
HDAC8-210ENST00000412342 MAPRE1Q15691 268 aaKnown RBP14.04□□□□□ -0.16
HDAC8-210ENST00000412342 MGAT5BQ3V5L5 792 aa14.04□□□□□ -0.16
HDAC8-210ENST00000412342 MDH1BQ5I0G3 518 aa14.04□□□□□ -0.16
HDAC8-210ENST00000412342 CDKAL1Q5VV42 579 aa14.04□□□□□ -0.16
HDAC8-210ENST00000412342 PAQR9Q6ZVX9 377 aa14.04□□□□□ -0.16
HDAC8-210ENST00000412342 GET4Q7L5D6 327 aaPredicted RBP14.04□□□□□ -0.16
HDAC8-210ENST00000412342 OTOP3Q7RTS5 596 aa14.04□□□□□ -0.16
HDAC8-210ENST00000412342 ZDHHC14Q8IZN3 488 aa14.04□□□□□ -0.16
HDAC8-210ENST00000412342 HS6ST3Q8IZP7 471 aa14.04□□□□□ -0.16
HDAC8-210ENST00000412342 CRYBG2Q8N1P7 616 aa14.04□□□□□ -0.16
HDAC8-210ENST00000412342 TDRD5Q8NAT2 981 aaKnown RBP14.04□□□□□ -0.16
HDAC8-210ENST00000412342 CCDC150Q8NCX0 1101 aa14.04□□□□□ -0.16
HDAC8-210ENST00000412342 PSMG2Q969U7 264 aa14.04□□□□□ -0.16
HDAC8-210ENST00000412342 CORO1BQ9BR76 489 aa14.04□□□□□ -0.16
HDAC8-210ENST00000412342 B3GNT5Q9BYG0 378 aa14.04□□□□□ -0.16
HDAC8-210ENST00000412342 ZNF334Q9HCZ1 680 aaPredicted RBP14.04□□□□□ -0.16
HDAC8-210ENST00000412342 SAMSN1Q9NSI8 373 aaKnown RBP14.04□□□□□ -0.16
HDAC8-210ENST00000412342 TMEM30AQ9NV96 361 aa14.04□□□□□ -0.16
HDAC8-210ENST00000412342 EPS15L1Q9UBC2 864 aa14.04□□□□□ -0.16
HDAC8-210ENST00000412342 NR2E1Q9Y466 385 aa14.04□□□□□ -0.16
HDAC8-210ENST00000412342 CLSTN1O94985 981 aa14.03□□□□□ -0.16
HDAC8-210ENST00000412342 HMGA1P17096 107 aaKnown RBP14.03□□□□□ -0.16
HDAC8-210ENST00000412342 SSTR3P32745 418 aaPredicted RBP14.03□□□□□ -0.16
HDAC8-210ENST00000412342 ALDH1A3P47895 512 aa14.03□□□□□ -0.16
HDAC8-210ENST00000412342 CACNA2D1P54289 1103 aa14.03□□□□□ -0.16
HDAC8-210ENST00000412342 EPHB3P54753 998 aa14.03□□□□□ -0.16
HDAC8-210ENST00000412342 ORC1Q13415 861 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms