RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 CHFRQ96EP1 664 aa15.37■□□□□ 0.05
HLA-DQB2-229ENST00000411527 CCSER1Q9C0I3 900 aa15.37■□□□□ 0.05
HLA-DQB2-229ENST00000411527 TDP1Q9NUW8 608 aa15.37■□□□□ 0.05
HLA-DQB2-229ENST00000411527 MAGED2Q9UNF1 606 aaPredicted RBP15.37■□□□□ 0.05
HLA-DQB2-229ENST00000411527 STYXL1Q9Y6J8 313 aa15.37■□□□□ 0.05
HLA-DQB2-229ENST00000411527 TULP1O00294 542 aaPredicted RBP15.36■□□□□ 0.05
HLA-DQB2-229ENST00000411527 PRPF40AO75400 957 aaKnown RBP15.36■□□□□ 0.05
HLA-DQB2-229ENST00000411527 EPN2O95208 641 aa15.36■□□□□ 0.05
HLA-DQB2-229ENST00000411527 EGFP01133 1207 aa15.36■□□□□ 0.05
HLA-DQB2-229ENST00000411527 ARSAP15289 507 aa15.36■□□□□ 0.05
HLA-DQB2-229ENST00000411527 DDX6P26196 483 aaKnown RBP eCLIP15.36■□□□□ 0.05
HLA-DQB2-229ENST00000411527 GJB2P29033 226 aa15.36■□□□□ 0.05
HLA-DQB2-229ENST00000411527 GPR15P49685 360 aa15.36■□□□□ 0.05
HLA-DQB2-229ENST00000411527 GALK1P51570 392 aa15.36■□□□□ 0.05
HLA-DQB2-229ENST00000411527 AMPD2Q01433 879 aa15.36■□□□□ 0.05
HLA-DQB2-229ENST00000411527 SV2CQ496J9 727 aa15.36■□□□□ 0.05
HLA-DQB2-229ENST00000411527 STKLD1Q8NE28 680 aa15.36■□□□□ 0.05
HLA-DQB2-229ENST00000411527 MRPS31Q92665 395 aaKnown RBP15.36■□□□□ 0.05
HLA-DQB2-229ENST00000411527 PI4K2AQ9BTU6 479 aa15.36■□□□□ 0.05
HLA-DQB2-229ENST00000411527 IKZF4Q9H2S9 585 aa15.36■□□□□ 0.05
HLA-DQB2-229ENST00000411527 KIF9Q9HAQ2 790 aa15.36■□□□□ 0.05
HLA-DQB2-229ENST00000411527 FBRSL1Q9HCM7 1045 aaKnown RBP15.36■□□□□ 0.05
HLA-DQB2-229ENST00000411527 RXFP3Q9NSD7 469 aa15.36■□□□□ 0.05
HLA-DQB2-229ENST00000411527 TMLHEQ9NVH6 421 aa15.36■□□□□ 0.05
HLA-DQB2-229ENST00000411527 POLR3BQ9NW08 1133 aaPredicted RBP15.36■□□□□ 0.05
HLA-DQB2-229ENST00000411527 TM4SF5O14894 197 aa15.35■□□□□ 0.05
HLA-DQB2-229ENST00000411527 RNF40O75150 1001 aa15.35■□□□□ 0.05
HLA-DQB2-229ENST00000411527 TSPY1Q01534 308 aa15.35■□□□□ 0.05
HLA-DQB2-229ENST00000411527 GRIN1Q05586 938 aa15.35■□□□□ 0.05
HLA-DQB2-229ENST00000411527 N4BP2L1Q5TBK1 243 aaPredicted RBP15.35■□□□□ 0.05
HLA-DQB2-229ENST00000411527 SDHAF4Q5VUM1 108 aa15.35■□□□□ 0.05
HLA-DQB2-229ENST00000411527 CRELD2Q6UXH1 353 aaPredicted RBP15.35■□□□□ 0.05
HLA-DQB2-229ENST00000411527 MON1AQ86VX9 555 aa15.35■□□□□ 0.05
HLA-DQB2-229ENST00000411527 EFCAB13Q8IY85 973 aa15.35■□□□□ 0.05
HLA-DQB2-229ENST00000411527 CAMKK1Q8N5S9 505 aa15.35■□□□□ 0.05
HLA-DQB2-229ENST00000411527 POMGNT1Q8WZA1 660 aa15.35■□□□□ 0.05
HLA-DQB2-229ENST00000411527 LARP4BQ92615 738 aaKnown RBP15.35■□□□□ 0.05
HLA-DQB2-229ENST00000411527 ST6GALNAC4Q9H4F1 302 aa15.35■□□□□ 0.05
HLA-DQB2-229ENST00000411527 MAP1BP46821 2468 aaKnown RBP15.35■□□□□ 0.05
HLA-DQB2-229ENST00000411527 SOBPA7XYQ1 873 aa15.34■□□□□ 0.05
HLA-DQB2-229ENST00000411527 AKAP3O75969 853 aa15.34■□□□□ 0.05
HLA-DQB2-229ENST00000411527 IL18RAPO95256 599 aa15.34■□□□□ 0.05
HLA-DQB2-229ENST00000411527 CSH1P0DML2 217 aa15.34■□□□□ 0.05
HLA-DQB2-229ENST00000411527 CSH2P0DML3 217 aa15.34■□□□□ 0.05
HLA-DQB2-229ENST00000411527 DRD1P21728 446 aa15.34■□□□□ 0.05
HLA-DQB2-229ENST00000411527 DDIT3P35638 169 aa15.34■□□□□ 0.05
HLA-DQB2-229ENST00000411527 LONP1P36776 959 aaKnown RBP15.34■□□□□ 0.05
HLA-DQB2-229ENST00000411527 POU5F1Q01860 360 aaKnown RBP15.34■□□□□ 0.05
HLA-DQB2-229ENST00000411527 POSTNQ15063 836 aa15.34■□□□□ 0.05
HLA-DQB2-229ENST00000411527 PDGFRLQ15198 375 aa15.34■□□□□ 0.05
HLA-DQB2-229ENST00000411527 NFE2Q16621 373 aaPredicted RBP15.34■□□□□ 0.05
HLA-DQB2-229ENST00000411527 DDR2Q16832 855 aa15.34■□□□□ 0.05
HLA-DQB2-229ENST00000411527 STPG1Q5TH74 334 aa15.34■□□□□ 0.05
HLA-DQB2-229ENST00000411527 ZNF720Q7Z2F6 126 aa15.34■□□□□ 0.05
HLA-DQB2-229ENST00000411527 NT5DC4Q86YG4 428 aa15.34■□□□□ 0.05
HLA-DQB2-229ENST00000411527 KRI1Q8N9T8 703 aaKnown RBP15.34■□□□□ 0.05
HLA-DQB2-229ENST00000411527 TTC16Q8NEE8 873 aa15.34■□□□□ 0.05
HLA-DQB2-229ENST00000411527 RIN3Q8TB24 985 aa15.34■□□□□ 0.05
HLA-DQB2-229ENST00000411527 TMX3Q96JJ7 454 aa15.34■□□□□ 0.05
HLA-DQB2-229ENST00000411527 ZC3H10Q96K80 434 aaKnown RBP15.34■□□□□ 0.05
HLA-DQB2-229ENST00000411527 ZNF560Q96MR9 790 aa15.34■□□□□ 0.05
HLA-DQB2-229ENST00000411527 P2RY13Q9BPV8 354 aa15.34■□□□□ 0.05
HLA-DQB2-229ENST00000411527 SMOC1Q9H4F8 434 aa15.34■□□□□ 0.05
HLA-DQB2-229ENST00000411527 ANGPTL2Q9UKU9 493 aa15.34■□□□□ 0.05
HLA-DQB2-229ENST00000411527 ADSSP30520 456 aa15.33■□□□□ 0.04
HLA-DQB2-229ENST00000411527 GJA4P35212 333 aa15.33■□□□□ 0.04
HLA-DQB2-229ENST00000411527 MPLP40238 635 aa15.33■□□□□ 0.04
HLA-DQB2-229ENST00000411527 PNPLA4P41247 253 aa15.33■□□□□ 0.04
HLA-DQB2-229ENST00000411527 RPL10AP62906 217 aaKnown RBP15.33■□□□□ 0.04
HLA-DQB2-229ENST00000411527 TFAMQ00059 246 aaKnown RBP15.33■□□□□ 0.04
HLA-DQB2-229ENST00000411527 ZNF268Q14587 947 aaPredicted RBP15.33■□□□□ 0.04
HLA-DQB2-229ENST00000411527 RABEP1Q15276 862 aa15.33■□□□□ 0.04
HLA-DQB2-229ENST00000411527 PLA2G2CQ5R387 149 aa15.33■□□□□ 0.04
HLA-DQB2-229ENST00000411527 ERICH6BQ5W0A0 696 aa15.33■□□□□ 0.04
HLA-DQB2-229ENST00000411527 NAIF1Q69YI7 327 aaPredicted RBP15.33■□□□□ 0.04
HLA-DQB2-229ENST00000411527 DYMQ7RTS9 669 aa15.33■□□□□ 0.04
HLA-DQB2-229ENST00000411527 SFR1Q86XK3 245 aa15.33■□□□□ 0.04
HLA-DQB2-229ENST00000411527 PDCL2Q8N4E4 241 aa15.33■□□□□ 0.04
HLA-DQB2-229ENST00000411527 CPA6Q8N4T0 437 aa15.33■□□□□ 0.04
HLA-DQB2-229ENST00000411527 HHIPQ96QV1 700 aa15.33■□□□□ 0.04
HLA-DQB2-229ENST00000411527 CYP2S1Q96SQ9 504 aa15.33■□□□□ 0.04
HLA-DQB2-229ENST00000411527 TRPC7Q9HCX4 862 aa15.33■□□□□ 0.04
HLA-DQB2-229ENST00000411527 UXTQ9UBK9 157 aaPredicted RBP15.33■□□□□ 0.04
HLA-DQB2-229ENST00000411527 AGAP1Q9UPQ3 857 aa15.33■□□□□ 0.04
HLA-DQB2-229ENST00000411527 PCDHGA5Q9Y5G8 931 aa15.33■□□□□ 0.04
HLA-DQB2-229ENST00000411527 CNOT1A5YKK6 2376 aaKnown RBP15.32■□□□□ 0.04
HLA-DQB2-229ENST00000411527 HUS1O60921 280 aa15.32■□□□□ 0.04
HLA-DQB2-229ENST00000411527 BMP15O95972 392 aa15.32■□□□□ 0.04
HLA-DQB2-229ENST00000411527 ITGB3P05106 788 aa15.32■□□□□ 0.04
HLA-DQB2-229ENST00000411527 ACAT1P24752 427 aaKnown RBP15.32■□□□□ 0.04
HLA-DQB2-229ENST00000411527 CYP2F1P24903 491 aa15.32■□□□□ 0.04
HLA-DQB2-229ENST00000411527 PMLP29590 882 aa15.32■□□□□ 0.04
HLA-DQB2-229ENST00000411527 POLR2BP30876 1174 aaKnown RBP15.32■□□□□ 0.04
HLA-DQB2-229ENST00000411527 PSMD2Q13200 908 aa15.32■□□□□ 0.04
HLA-DQB2-229ENST00000411527 MTF1Q14872 753 aa15.32■□□□□ 0.04
HLA-DQB2-229ENST00000411527 PLK5Q496M5 336 aa15.32■□□□□ 0.04
HLA-DQB2-229ENST00000411527 FBXO43Q4G163 708 aa15.32■□□□□ 0.04
HLA-DQB2-229ENST00000411527 LARP1BQ659C4 914 aaKnown RBP15.32■□□□□ 0.04
HLA-DQB2-229ENST00000411527 RPLP0P6Q8NHW5 317 aa15.32■□□□□ 0.04
HLA-DQB2-229ENST00000411527 EXOC4Q96A65 974 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms