RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 PNPLA4P41247 253 aa18.01■□□□□ 0.47
MRPL55-220ENST00000411464 RAP1GAPP47736 663 aa18.01■□□□□ 0.47
MRPL55-220ENST00000411464 LIMK1P53667 647 aa18.01■□□□□ 0.47
MRPL55-220ENST00000411464 POSTNQ15063 836 aa18.01■□□□□ 0.47
MRPL55-220ENST00000411464 NFE2Q16621 373 aaPredicted RBP18.01■□□□□ 0.47
MRPL55-220ENST00000411464 TMEM150AQ86TG1 271 aa18.01■□□□□ 0.47
MRPL55-220ENST00000411464 KBTBD6Q86V97 674 aa18.01■□□□□ 0.47
MRPL55-220ENST00000411464 MON1AQ86VX9 555 aa18.01■□□□□ 0.47
MRPL55-220ENST00000411464 CAMKK1Q8N5S9 505 aa18.01■□□□□ 0.47
MRPL55-220ENST00000411464 LRRC15Q8TF66 581 aa18.01■□□□□ 0.47
MRPL55-220ENST00000411464 POMGNT1Q8WZA1 660 aa18.01■□□□□ 0.47
MRPL55-220ENST00000411464 ZNF560Q96MR9 790 aa18.01■□□□□ 0.47
MRPL55-220ENST00000411464 PI4K2AQ9BTU6 479 aa18.01■□□□□ 0.47
MRPL55-220ENST00000411464 ST6GALNAC4Q9H4F1 302 aa18.01■□□□□ 0.47
MRPL55-220ENST00000411464 OTOL1A6NHN0 477 aaPredicted RBP18■□□□□ 0.47
MRPL55-220ENST00000411464 AKAP3O75969 853 aa18■□□□□ 0.47
MRPL55-220ENST00000411464 EPN2O95208 641 aa18■□□□□ 0.47
MRPL55-220ENST00000411464 ARSAP15289 507 aa18■□□□□ 0.47
MRPL55-220ENST00000411464 DRD1P21728 446 aa18■□□□□ 0.47
MRPL55-220ENST00000411464 GALK1P51570 392 aa18■□□□□ 0.47
MRPL55-220ENST00000411464 PDGFRLQ15198 375 aa18■□□□□ 0.47
MRPL55-220ENST00000411464 RABEP1Q15276 862 aa18■□□□□ 0.47
MRPL55-220ENST00000411464 NT5DC4Q86YG4 428 aa18■□□□□ 0.47
MRPL55-220ENST00000411464 LARP4BQ92615 738 aaKnown RBP18■□□□□ 0.47
MRPL55-220ENST00000411464 P2RY13Q9BPV8 354 aa18■□□□□ 0.47
MRPL55-220ENST00000411464 PCDHGA5Q9Y5G8 931 aa18■□□□□ 0.47
MRPL55-220ENST00000411464 RNF40O75150 1001 aa17.99■□□□□ 0.47
MRPL55-220ENST00000411464 EGFP01133 1207 aa17.99■□□□□ 0.47
MRPL55-220ENST00000411464 RPL10AP62906 217 aaKnown RBP17.99■□□□□ 0.47
MRPL55-220ENST00000411464 TFAMQ00059 246 aaKnown RBP17.99■□□□□ 0.47
MRPL55-220ENST00000411464 ZNF268Q14587 947 aaPredicted RBP17.99■□□□□ 0.47
MRPL55-220ENST00000411464 FBXO43Q4G163 708 aa17.99■□□□□ 0.47
MRPL55-220ENST00000411464 CRELD2Q6UXH1 353 aaPredicted RBP17.99■□□□□ 0.47
MRPL55-220ENST00000411464 ZNF720Q7Z2F6 126 aa17.99■□□□□ 0.47
MRPL55-220ENST00000411464 HVCN1Q96D96 273 aa17.99■□□□□ 0.47
MRPL55-220ENST00000411464 TMX3Q96JJ7 454 aa17.99■□□□□ 0.47
MRPL55-220ENST00000411464 TMLHEQ9NVH6 421 aa17.99■□□□□ 0.47
MRPL55-220ENST00000411464 UXTQ9UBK9 157 aaPredicted RBP17.99■□□□□ 0.47
MRPL55-220ENST00000411464 ANGPTL2Q9UKU9 493 aa17.99■□□□□ 0.47
MRPL55-220ENST00000411464 HUS1O60921 280 aa17.98■□□□□ 0.47
MRPL55-220ENST00000411464 GPR15P49685 360 aa17.98■□□□□ 0.47
MRPL55-220ENST00000411464 DDR2Q16832 855 aa17.98■□□□□ 0.47
MRPL55-220ENST00000411464 N4BP2L1Q5TBK1 243 aaPredicted RBP17.98■□□□□ 0.47
MRPL55-220ENST00000411464 STPG1Q5TH74 334 aa17.98■□□□□ 0.47
MRPL55-220ENST00000411464 SDHAF4Q5VUM1 108 aa17.98■□□□□ 0.47
MRPL55-220ENST00000411464 EFCAB13Q8IY85 973 aa17.98■□□□□ 0.47
MRPL55-220ENST00000411464 PDCL2Q8N4E4 241 aa17.98■□□□□ 0.47
MRPL55-220ENST00000411464 CPA6Q8N4T0 437 aa17.98■□□□□ 0.47
MRPL55-220ENST00000411464 TTC16Q8NEE8 873 aa17.98■□□□□ 0.47
MRPL55-220ENST00000411464 CACTINQ8WUQ7 758 aaKnown RBP17.98■□□□□ 0.47
MRPL55-220ENST00000411464 CHFRQ96EP1 664 aa17.98■□□□□ 0.47
MRPL55-220ENST00000411464 ZC3H10Q96K80 434 aaKnown RBP17.98■□□□□ 0.47
MRPL55-220ENST00000411464 ACBD6Q9BR61 282 aa17.98■□□□□ 0.47
MRPL55-220ENST00000411464 FAM213AQ9BRX8 229 aa17.98■□□□□ 0.47
MRPL55-220ENST00000411464 FBRSL1Q9HCM7 1045 aaKnown RBP17.98■□□□□ 0.47
MRPL55-220ENST00000411464 ABCB6Q9NP58 842 aa17.98■□□□□ 0.47
MRPL55-220ENST00000411464 RXFP3Q9NSD7 469 aa17.98■□□□□ 0.47
MRPL55-220ENST00000411464 DDX43Q9NXZ2 648 aaKnown RBP17.98■□□□□ 0.47
MRPL55-220ENST00000411464 AGAP1Q9UPQ3 857 aa17.98■□□□□ 0.47
MRPL55-220ENST00000411464 EXOC7Q9UPT5 735 aa17.98■□□□□ 0.47
MRPL55-220ENST00000411464 SMC3Q9UQE7 1217 aa17.98■□□□□ 0.47
MRPL55-220ENST00000411464 PDCD11Q14690 1871 aaKnown RBP17.97■□□□□ 0.47
MRPL55-220ENST00000411464 TM4SF5O14894 197 aa17.97■□□□□ 0.47
MRPL55-220ENST00000411464 CYP2F1P24903 491 aa17.97■□□□□ 0.47
MRPL55-220ENST00000411464 ADSSP30520 456 aa17.97■□□□□ 0.47
MRPL55-220ENST00000411464 POLR2BP30876 1174 aaKnown RBP17.97■□□□□ 0.47
MRPL55-220ENST00000411464 MPLP40238 635 aa17.97■□□□□ 0.47
MRPL55-220ENST00000411464 GRIN1Q05586 938 aa17.97■□□□□ 0.47
MRPL55-220ENST00000411464 FAM160A1Q05DH4 1040 aa17.97■□□□□ 0.47
MRPL55-220ENST00000411464 MTF1Q14872 753 aa17.97■□□□□ 0.47
MRPL55-220ENST00000411464 LARP1BQ659C4 914 aaKnown RBP17.97■□□□□ 0.47
MRPL55-220ENST00000411464 DYMQ7RTS9 669 aa17.97■□□□□ 0.47
MRPL55-220ENST00000411464 SFR1Q86XK3 245 aa17.97■□□□□ 0.47
MRPL55-220ENST00000411464 STKLD1Q8NE28 680 aa17.97■□□□□ 0.47
MRPL55-220ENST00000411464 LEO1Q8WVC0 666 aaPredicted RBP17.97■□□□□ 0.47
MRPL55-220ENST00000411464 HHIPQ96QV1 700 aa17.97■□□□□ 0.47
MRPL55-220ENST00000411464 IKZF4Q9H2S9 585 aa17.97■□□□□ 0.47
MRPL55-220ENST00000411464 ECT2Q9H8V3 914 aa17.97■□□□□ 0.47
MRPL55-220ENST00000411464 MRPL44Q9H9J2 332 aaKnown RBP17.97■□□□□ 0.47
MRPL55-220ENST00000411464 TRPC7Q9HCX4 862 aa17.97■□□□□ 0.47
MRPL55-220ENST00000411464 VPS45Q9NRW7 570 aa17.97■□□□□ 0.47
MRPL55-220ENST00000411464 DUS2Q9NX74 493 aaKnown RBP17.97■□□□□ 0.47
MRPL55-220ENST00000411464 KMT2BQ9UMN6 2715 aaPredicted RBP17.97■□□□□ 0.47
MRPL55-220ENST00000411464 ITGB3P05106 788 aa17.96■□□□□ 0.47
MRPL55-220ENST00000411464 USP17L7P0C7H9 530 aa17.96■□□□□ 0.47
MRPL55-220ENST00000411464 GJA4P35212 333 aa17.96■□□□□ 0.47
MRPL55-220ENST00000411464 MYL7Q01449 175 aa17.96■□□□□ 0.47
MRPL55-220ENST00000411464 SF3A1Q15459 793 aaKnown RBP17.96■□□□□ 0.47
MRPL55-220ENST00000411464 ELF2Q15723 593 aa17.96■□□□□ 0.47
MRPL55-220ENST00000411464 PLA2G2CQ5R387 149 aa17.96■□□□□ 0.47
MRPL55-220ENST00000411464 BRAPQ7Z569 592 aa17.96■□□□□ 0.47
MRPL55-220ENST00000411464 TMEM86AQ8N2M4 240 aa17.96■□□□□ 0.47
MRPL55-220ENST00000411464 CSGALNACT2Q8N6G5 542 aa17.96■□□□□ 0.47
MRPL55-220ENST00000411464 RPLP0P6Q8NHW5 317 aa17.96■□□□□ 0.47
MRPL55-220ENST00000411464 RIN3Q8TB24 985 aa17.96■□□□□ 0.47
MRPL55-220ENST00000411464 ATP2A3Q93084 1043 aa17.96■□□□□ 0.47
MRPL55-220ENST00000411464 TRMT2BQ96GJ1 504 aaKnown RBP17.96■□□□□ 0.47
MRPL55-220ENST00000411464 MYRFLQ96LU7 910 aa17.96■□□□□ 0.47
MRPL55-220ENST00000411464 POLR3BQ9NW08 1133 aaPredicted RBP17.96■□□□□ 0.47
MRPL55-220ENST00000411464 GTF3C4Q9UKN8 822 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms