RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 PPME1Q9Y570 386 aa17.56■□□□□ 0.4
LIMS2-208ENST00000410011 KCNA3P22001 575 aa17.56■□□□□ 0.4
LIMS2-208ENST00000410011 CA4P22748 312 aa17.56■□□□□ 0.4
LIMS2-208ENST00000410011 RASSF2P50749 326 aa17.56■□□□□ 0.4
LIMS2-208ENST00000410011 SP2Q02086 613 aa17.56■□□□□ 0.4
LIMS2-208ENST00000410011 ADCY1Q08828 1119 aa17.56■□□□□ 0.4
LIMS2-208ENST00000410011 PDIA2Q13087 525 aaKnown RBP17.56■□□□□ 0.4
LIMS2-208ENST00000410011 CBLBQ13191 982 aa17.56■□□□□ 0.4
LIMS2-208ENST00000410011 HIF1AQ16665 826 aa17.56■□□□□ 0.4
LIMS2-208ENST00000410011 ZFYVE27Q5T4F4 411 aa17.56■□□□□ 0.4
LIMS2-208ENST00000410011 SCYL3Q8IZE3 742 aa17.56■□□□□ 0.4
LIMS2-208ENST00000410011 WDTC1Q8N5D0 677 aa17.56■□□□□ 0.4
LIMS2-208ENST00000410011 ZNF280CQ8ND82 737 aa17.56■□□□□ 0.4
LIMS2-208ENST00000410011 MIEF2Q96C03 454 aa17.56■□□□□ 0.4
LIMS2-208ENST00000410011 PAIP2Q9BPZ3 127 aaKnown RBP17.56■□□□□ 0.4
LIMS2-208ENST00000410011 NIF3L1Q9GZT8 377 aa17.56■□□□□ 0.4
LIMS2-208ENST00000410011 ANKFY1Q9P2R3 1169 aa17.56■□□□□ 0.4
LIMS2-208ENST00000410011 GRID1Q9ULK0 1009 aa17.56■□□□□ 0.4
LIMS2-208ENST00000410011 C19orf81C9J6K1 198 aa17.55■□□□□ 0.4
LIMS2-208ENST00000410011 HNRNPCL1O60812 293 aaKnown RBP17.55■□□□□ 0.4
LIMS2-208ENST00000410011 KRT7P08729 469 aa17.55■□□□□ 0.4
LIMS2-208ENST00000410011 EFNA5P52803 228 aa17.55■□□□□ 0.4
LIMS2-208ENST00000410011 GPX6P59796 221 aa17.55■□□□□ 0.4
LIMS2-208ENST00000410011 TMEM132BQ14DG7 1078 aa17.55■□□□□ 0.4
LIMS2-208ENST00000410011 SLC45A4Q5BKX6 768 aa17.55■□□□□ 0.4
LIMS2-208ENST00000410011 ERICH1Q86X53 443 aa17.55■□□□□ 0.4
LIMS2-208ENST00000410011 VSIG1Q86XK7 387 aa17.55■□□□□ 0.4
LIMS2-208ENST00000410011 THNSL1Q8IYQ7 743 aa17.55■□□□□ 0.4
LIMS2-208ENST00000410011 NAT8LQ8N9F0 302 aa17.55■□□□□ 0.4
LIMS2-208ENST00000410011 ATP11CQ8NB49 1132 aa17.55■□□□□ 0.4
LIMS2-208ENST00000410011 DNERQ8NFT8 737 aa17.55■□□□□ 0.4
LIMS2-208ENST00000410011 C10orf82Q8WW14 230 aa17.55■□□□□ 0.4
LIMS2-208ENST00000410011 TMEM121Q9BTD3 319 aa17.55■□□□□ 0.4
LIMS2-208ENST00000410011 LHX5Q9H2C1 402 aa17.55■□□□□ 0.4
LIMS2-208ENST00000410011 CISHQ9NSE2 258 aa17.55■□□□□ 0.4
LIMS2-208ENST00000410011 DONSONQ9NYP3 566 aa17.55■□□□□ 0.4
LIMS2-208ENST00000410011 CEP83Q9Y592 693 aa17.55■□□□□ 0.4
LIMS2-208ENST00000410011 LRRD1A4D1F6 860 aa17.55■□□□□ 0.4
LIMS2-208ENST00000410011 SIGLEC16A6NMB1 481 aa17.55■□□□□ 0.4
LIMS2-208ENST00000410011 E7ENQ6 273 aa17.55■□□□□ 0.4
LIMS2-208ENST00000410011 SGK1O00141 431 aa17.55■□□□□ 0.4
LIMS2-208ENST00000410011 C2CD2LO14523 706 aa17.55■□□□□ 0.4
LIMS2-208ENST00000410011 SSTR3P32745 418 aaPredicted RBP17.55■□□□□ 0.4
LIMS2-208ENST00000410011 ARL4CP56559 192 aa17.55■□□□□ 0.4
LIMS2-208ENST00000410011 SP4Q02446 784 aa17.55■□□□□ 0.4
LIMS2-208ENST00000410011 SLC1A5Q15758 541 aa17.55■□□□□ 0.4
LIMS2-208ENST00000410011 STXBP2Q15833 593 aa17.55■□□□□ 0.4
LIMS2-208ENST00000410011 KLHL38Q2WGJ6 581 aa17.55■□□□□ 0.4
LIMS2-208ENST00000410011 TXNRD3NBQ6F5E7 133 aa17.55■□□□□ 0.4
LIMS2-208ENST00000410011 BBS12Q6ZW61 710 aa17.55■□□□□ 0.4
LIMS2-208ENST00000410011 SH3TC2Q8TF17 1288 aa17.55■□□□□ 0.4
LIMS2-208ENST00000410011 UTP4Q969X6 686 aaKnown RBP17.55■□□□□ 0.4
LIMS2-208ENST00000410011 ERP27Q96DN0 273 aa17.55■□□□□ 0.4
LIMS2-208ENST00000410011 TRIM33Q9UPN9 1127 aa17.55■□□□□ 0.4
LIMS2-208ENST00000410011 STK38LQ9Y2H1 464 aa17.55■□□□□ 0.4
LIMS2-208ENST00000410011 TM9SF1O15321 606 aa17.54■□□□□ 0.4
LIMS2-208ENST00000410011 TOM1L1O75674 476 aa17.54■□□□□ 0.4
LIMS2-208ENST00000410011 EDN1P05305 212 aa17.54■□□□□ 0.4
LIMS2-208ENST00000410011 POLR2BP30876 1174 aaKnown RBP17.54■□□□□ 0.4
LIMS2-208ENST00000410011 DUOXA2Q1HG44 320 aa17.54■□□□□ 0.4
LIMS2-208ENST00000410011 HHATQ5VTY9 493 aa17.54■□□□□ 0.4
LIMS2-208ENST00000410011 DCAF15Q66K64 600 aa17.54■□□□□ 0.4
LIMS2-208ENST00000410011 GPAT2Q6NUI2 795 aa17.54■□□□□ 0.4
LIMS2-208ENST00000410011 ZNF75CPQ92670 426 aaPredicted RBP17.54■□□□□ 0.4
LIMS2-208ENST00000410011 FAXDC2Q96IV6 333 aa17.54■□□□□ 0.4
LIMS2-208ENST00000410011 MAK16Q9BXY0 300 aaKnown RBP17.54■□□□□ 0.4
LIMS2-208ENST00000410011 VPS11Q9H270 941 aa17.54■□□□□ 0.4
LIMS2-208ENST00000410011 ACSS3Q9H6R3 686 aa17.54■□□□□ 0.4
LIMS2-208ENST00000410011 KIF9Q9HAQ2 790 aa17.54■□□□□ 0.4
LIMS2-208ENST00000410011 SAR1AQ9NR31 198 aa17.54■□□□□ 0.4
LIMS2-208ENST00000410011 NRBP2Q9NSY0 501 aa17.54■□□□□ 0.4
LIMS2-208ENST00000410011 CLUHO75153 1309 aa17.54■□□□□ 0.4
LIMS2-208ENST00000410011 COL11A1P12107 1806 aaPredicted RBP17.54■□□□□ 0.4
LIMS2-208ENST00000410011 ATP2A2P16615 1042 aaKnown RBP17.54■□□□□ 0.4
LIMS2-208ENST00000410011 RPS12P25398 132 aaKnown RBP17.54■□□□□ 0.4
LIMS2-208ENST00000410011 PLCB3Q01970 1234 aa17.54■□□□□ 0.4
LIMS2-208ENST00000410011 SLC25A11Q02978 314 aaKnown RBP17.54■□□□□ 0.4
LIMS2-208ENST00000410011 CAPSQ13938 189 aa17.54■□□□□ 0.4
LIMS2-208ENST00000410011 CFAP61Q8NHU2 1237 aa17.54■□□□□ 0.4
LIMS2-208ENST00000410011 PYROXD1Q8WU10 500 aa17.54■□□□□ 0.4
LIMS2-208ENST00000410011 CPT1BQ92523 772 aa17.54■□□□□ 0.4
LIMS2-208ENST00000410011 SLCO1B3Q9NPD5 702 aa17.54■□□□□ 0.4
LIMS2-208ENST00000410011 PHIPQ8WWQ0 1821 aa17.54■□□□□ 0.4
LIMS2-208ENST00000410011 DOCK5Q9H7D0 1870 aa17.53■□□□□ 0.4
LIMS2-208ENST00000410011 PTPRAP18433 802 aa17.53■□□□□ 0.4
LIMS2-208ENST00000410011 BRD2P25440 801 aaKnown RBP17.53■□□□□ 0.4
LIMS2-208ENST00000410011 CTCFP49711 727 aaPredicted RBP17.53■□□□□ 0.4
LIMS2-208ENST00000410011 CLNS1AP54105 237 aaKnown RBP17.53■□□□□ 0.4
LIMS2-208ENST00000410011 YWHAEP62258 255 aaKnown RBP17.53■□□□□ 0.4
LIMS2-208ENST00000410011 HADHQ16836 314 aaKnown RBP17.53■□□□□ 0.4
LIMS2-208ENST00000410011 C4orf33Q8N1A6 199 aa17.53■□□□□ 0.4
LIMS2-208ENST00000410011 MZB1Q8WU39 189 aa17.53■□□□□ 0.4
LIMS2-208ENST00000410011 MRPL4Q9BYD3 311 aaKnown RBP17.53■□□□□ 0.4
LIMS2-208ENST00000410011 DOCK1Q14185 1865 aa17.53■□□□□ 0.4
LIMS2-208ENST00000410011 A0A1W2PPM1 405 aa17.53■□□□□ 0.4
LIMS2-208ENST00000410011 A8MUI8 341 aa17.53■□□□□ 0.4
LIMS2-208ENST00000410011 MSCO60682 206 aa17.53■□□□□ 0.4
LIMS2-208ENST00000410011 MAFO75444 373 aaPredicted RBP17.53■□□□□ 0.4
LIMS2-208ENST00000410011 WEE2P0C1S8 567 aa17.53■□□□□ 0.4
LIMS2-208ENST00000410011 T-ENOLP0DO92 83 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms