RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 IRF7Q92985 503 aa21.03■□□□□ 0.96
TSPAN4-209ENST00000409543 PI4K2AQ9BTU6 479 aa21.03■□□□□ 0.96
TSPAN4-209ENST00000409543 MKNK1Q9BUB5 465 aa21.03■□□□□ 0.96
TSPAN4-209ENST00000409543 FOXQ1Q9C009 403 aa21.03■□□□□ 0.96
TSPAN4-209ENST00000409543 KCTD10Q9H3F6 313 aa21.03■□□□□ 0.96
TSPAN4-209ENST00000409543 BRD9Q9H8M2 597 aa21.03■□□□□ 0.96
TSPAN4-209ENST00000409543 IL21Q9HBE4 155 aa21.03■□□□□ 0.96
TSPAN4-209ENST00000409543 TRPV5Q9NQA5 729 aa21.03■□□□□ 0.96
TSPAN4-209ENST00000409543 GTF3C4Q9UKN8 822 aa21.03■□□□□ 0.96
TSPAN4-209ENST00000409543 PDXKO00764 312 aa21.02■□□□□ 0.96
TSPAN4-209ENST00000409543 DCNP07585 359 aaKnown RBP21.02■□□□□ 0.96
TSPAN4-209ENST00000409543 CDC25CP30307 473 aa21.02■□□□□ 0.96
TSPAN4-209ENST00000409543 RPL10AP62906 217 aaKnown RBP21.02■□□□□ 0.96
TSPAN4-209ENST00000409543 ARHGAP15Q53QZ3 475 aa21.02■□□□□ 0.96
TSPAN4-209ENST00000409543 STXBP5Q5T5C0 1151 aa21.02■□□□□ 0.96
TSPAN4-209ENST00000409543 KRBA2Q6ZNG9 492 aa21.02■□□□□ 0.96
TSPAN4-209ENST00000409543 ARID3BQ8IVW6 561 aaPredicted RBP21.02■□□□□ 0.96
TSPAN4-209ENST00000409543 CCDC47Q96A33 483 aaKnown RBP21.02■□□□□ 0.96
TSPAN4-209ENST00000409543 OSBPL6Q9BZF3 934 aa21.02■□□□□ 0.96
TSPAN4-209ENST00000409543 GOLPH3LQ9H4A5 285 aa21.02■□□□□ 0.96
TSPAN4-209ENST00000409543 HEPACAM2A8MVW5 462 aa21.01■□□□□ 0.95
TSPAN4-209ENST00000409543 HCRTO43612 131 aa21.01■□□□□ 0.95
TSPAN4-209ENST00000409543 RHOBTB3O94955 611 aa21.01■□□□□ 0.95
TSPAN4-209ENST00000409543 STAU1O95793 577 aaKnown RBP21.01■□□□□ 0.95
TSPAN4-209ENST00000409543 FAM163BP0C2L3 166 aa21.01■□□□□ 0.95
TSPAN4-209ENST00000409543 PRR29P0C7W0 189 aa21.01■□□□□ 0.95
TSPAN4-209ENST00000409543 HMGA1P17096 107 aaKnown RBP21.01■□□□□ 0.95
TSPAN4-209ENST00000409543 WARSP23381 471 aaKnown RBP21.01■□□□□ 0.95
TSPAN4-209ENST00000409543 WEE1P30291 646 aa21.01■□□□□ 0.95
TSPAN4-209ENST00000409543 GDI1P31150 447 aa21.01■□□□□ 0.95
TSPAN4-209ENST00000409543 CLDN10P78369 228 aa21.01■□□□□ 0.95
TSPAN4-209ENST00000409543 DPYDQ12882 1025 aa21.01■□□□□ 0.95
TSPAN4-209ENST00000409543 ANGPT1Q15389 498 aa21.01■□□□□ 0.95
TSPAN4-209ENST00000409543 CFAP221Q4G0U5 840 aa21.01■□□□□ 0.95
TSPAN4-209ENST00000409543 GPR158Q5T848 1215 aa21.01■□□□□ 0.95
TSPAN4-209ENST00000409543 FAM171BQ6P995 826 aa21.01■□□□□ 0.95
TSPAN4-209ENST00000409543 TPRG1Q6ZUI0 275 aa21.01■□□□□ 0.95
TSPAN4-209ENST00000409543 FUBP3Q96I24 572 aaKnown RBP eCLIP21.01■□□□□ 0.95
TSPAN4-209ENST00000409543 GCNAQ96QF7 691 aa21.01■□□□□ 0.95
TSPAN4-209ENST00000409543 MMS19Q96T76 1030 aa21.01■□□□□ 0.95
TSPAN4-209ENST00000409543 NELL2Q99435 816 aa21.01■□□□□ 0.95
TSPAN4-209ENST00000409543 TASP1Q9H6P5 420 aa21.01■□□□□ 0.95
TSPAN4-209ENST00000409543 GDPD2Q9HCC8 539 aa21.01■□□□□ 0.95
TSPAN4-209ENST00000409543 HEBP1Q9NRV9 189 aa21.01■□□□□ 0.95
TSPAN4-209ENST00000409543 CDH9Q9ULB4 789 aa21.01■□□□□ 0.95
TSPAN4-209ENST00000409543 MYBPHLA2RUH7 354 aa21■□□□□ 0.95
TSPAN4-209ENST00000409543 ZNF263O14978 683 aa21■□□□□ 0.95
TSPAN4-209ENST00000409543 ZNF202O95125 648 aa21■□□□□ 0.95
TSPAN4-209ENST00000409543 KIF20AO95235 890 aa21■□□□□ 0.95
TSPAN4-209ENST00000409543 CSH1P0DML2 217 aa21■□□□□ 0.95
TSPAN4-209ENST00000409543 CSH2P0DML3 217 aa21■□□□□ 0.95
TSPAN4-209ENST00000409543 CYP2F1P24903 491 aa21■□□□□ 0.95
TSPAN4-209ENST00000409543 LMO2P25791 158 aa21■□□□□ 0.95
TSPAN4-209ENST00000409543 ATICP31939 592 aa21■□□□□ 0.95
TSPAN4-209ENST00000409543 AP3M2P53677 418 aa21■□□□□ 0.95
TSPAN4-209ENST00000409543 NUCB2P80303 420 aa21■□□□□ 0.95
TSPAN4-209ENST00000409543 TRPC3Q13507 836 aa21■□□□□ 0.95
TSPAN4-209ENST00000409543 SPATA2LQ8IUW3 424 aaPredicted RBP21■□□□□ 0.95
TSPAN4-209ENST00000409543 PLEKHO2Q8TD55 490 aa21■□□□□ 0.95
TSPAN4-209ENST00000409543 PARD3BQ8TEW8 1205 aa21■□□□□ 0.95
TSPAN4-209ENST00000409543 RSPRY1Q96DX4 576 aa21■□□□□ 0.95
TSPAN4-209ENST00000409543 SYT15Q9BQS2 421 aa21■□□□□ 0.95
TSPAN4-209ENST00000409543 LTB4R2Q9NPC1 389 aa21■□□□□ 0.95
TSPAN4-209ENST00000409543 ZMYM5Q9UJ78 669 aa21■□□□□ 0.95
TSPAN4-209ENST00000409543 NCANO14594 1321 aa21■□□□□ 0.95
TSPAN4-209ENST00000409543 COL4A3Q01955 1670 aa20.99■□□□□ 0.95
TSPAN4-209ENST00000409543 FAM170BA6NMN3 283 aa20.99■□□□□ 0.95
TSPAN4-209ENST00000409543 PROB1E7EW31 1015 aa20.99■□□□□ 0.95
TSPAN4-209ENST00000409543 PHACTR2O75167 634 aa20.99■□□□□ 0.95
TSPAN4-209ENST00000409543 TACC1O75410 805 aa20.99■□□□□ 0.95
TSPAN4-209ENST00000409543 NR3C1P04150 777 aa20.99■□□□□ 0.95
TSPAN4-209ENST00000409543 GLULP15104 373 aa20.99■□□□□ 0.95
TSPAN4-209ENST00000409543 CD72P21854 359 aa20.99■□□□□ 0.95
TSPAN4-209ENST00000409543 NBL1P41271 181 aa20.99■□□□□ 0.95
TSPAN4-209ENST00000409543 CASP4P49662 377 aa20.99■□□□□ 0.95
TSPAN4-209ENST00000409543 GPR15P49685 360 aa20.99■□□□□ 0.95
TSPAN4-209ENST00000409543 FCHO2Q0JRZ9 810 aa20.99■□□□□ 0.95
TSPAN4-209ENST00000409543 UBXN2BQ14CS0 331 aa20.99■□□□□ 0.95
TSPAN4-209ENST00000409543 MAPRE1Q15691 268 aaKnown RBP20.99■□□□□ 0.95
TSPAN4-209ENST00000409543 DDR2Q16832 855 aa20.99■□□□□ 0.95
TSPAN4-209ENST00000409543 WDR72Q3MJ13 1102 aa20.99■□□□□ 0.95
TSPAN4-209ENST00000409543 ZNF852Q6ZMS4 543 aa20.99■□□□□ 0.95
TSPAN4-209ENST00000409543 C4orf50Q6ZRC1 276 aa20.99■□□□□ 0.95
TSPAN4-209ENST00000409543 OBP2AQ9NY56 170 aa20.99■□□□□ 0.95
TSPAN4-209ENST00000409543 TRAF3IP3Q9Y228 551 aa20.99■□□□□ 0.95
TSPAN4-209ENST00000409543 MRPS17Q9Y2R5 130 aaKnown RBP20.99■□□□□ 0.95
TSPAN4-209ENST00000409543 MTF2Q9Y483 593 aaPredicted RBP20.99■□□□□ 0.95
TSPAN4-209ENST00000409543 LRRIQ3A6PVS8 624 aaPredicted RBP20.98■□□□□ 0.95
TSPAN4-209ENST00000409543 MAN2B1O00754 1011 aa20.98■□□□□ 0.95
TSPAN4-209ENST00000409543 ATP2C2O75185 946 aa20.98■□□□□ 0.95
TSPAN4-209ENST00000409543 LRRN2O75325 713 aa20.98■□□□□ 0.95
TSPAN4-209ENST00000409543 NOL4O94818 638 aa20.98■□□□□ 0.95
TSPAN4-209ENST00000409543 F11P03951 625 aa20.98■□□□□ 0.95
TSPAN4-209ENST00000409543 PDGFRBP09619 1106 aa20.98■□□□□ 0.95
TSPAN4-209ENST00000409543 GNL1P36915 607 aaPredicted RBP20.98■□□□□ 0.95
TSPAN4-209ENST00000409543 MAGEA11P43364 429 aa20.98■□□□□ 0.95
TSPAN4-209ENST00000409543 NLRP12P59046 1061 aa20.98■□□□□ 0.95
TSPAN4-209ENST00000409543 MYL6P60660 151 aa20.98■□□□□ 0.95
TSPAN4-209ENST00000409543 TNNC1P63316 161 aa20.98■□□□□ 0.95
TSPAN4-209ENST00000409543 CYP4F8P98187 520 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms