RNA–Protein interactions for RNA: ENST00000409214.5

GTDC1-206, Transcript of glycosyltransferase like domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTDC1, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-206ENST00000409214 NPC1L1Q9UHC9 1359 aa4.66□□□□□ -1.66
GTDC1-206ENST00000409214 KIF16BQ96L93 1317 aa4.66□□□□□ -1.66
GTDC1-206ENST00000409214 SYNMO15061 1565 aa4.66□□□□□ -1.66
GTDC1-206ENST00000409214 H7BY64 318 aa4.66□□□□□ -1.66
GTDC1-206ENST00000409214 RGS13O14921 159 aa4.66□□□□□ -1.66
GTDC1-206ENST00000409214 SCAMP1O15126 338 aa4.66□□□□□ -1.66
GTDC1-206ENST00000409214 SLC25A17O43808 307 aa4.66□□□□□ -1.66
GTDC1-206ENST00000409214 SYNCRIPO60506 623 aaKnown RBP4.66□□□□□ -1.66
GTDC1-206ENST00000409214 SEC22BO75396 215 aa4.66□□□□□ -1.66
GTDC1-206ENST00000409214 LRG1P02750 347 aa4.66□□□□□ -1.66
GTDC1-206ENST00000409214 SCG5P05408 212 aa4.66□□□□□ -1.66
GTDC1-206ENST00000409214 HEXBP07686 556 aa4.66□□□□□ -1.66
GTDC1-206ENST00000409214 TATP17735 454 aaPredicted RBP4.66□□□□□ -1.66
GTDC1-206ENST00000409214 KELP23276 732 aa4.66□□□□□ -1.66
GTDC1-206ENST00000409214 GDI1P31150 447 aa4.66□□□□□ -1.66
GTDC1-206ENST00000409214 PRKCIP41743 596 aa4.66□□□□□ -1.66
GTDC1-206ENST00000409214 ETF1P62495 437 aaKnown RBP4.66□□□□□ -1.66
GTDC1-206ENST00000409214 TRA2BP62995 288 aaKnown RBP4.66□□□□□ -1.66
GTDC1-206ENST00000409214 DLG4P78352 724 aa4.66□□□□□ -1.66
GTDC1-206ENST00000409214 CHAF1BQ13112 559 aa4.66□□□□□ -1.66
GTDC1-206ENST00000409214 PAK1Q13153 545 aa4.66□□□□□ -1.66
GTDC1-206ENST00000409214 PRPF4BQ13523 1007 aaKnown RBP4.66□□□□□ -1.66
GTDC1-206ENST00000409214 DUSP28Q4G0W2 176 aa4.66□□□□□ -1.66
GTDC1-206ENST00000409214 FBXO38Q6PIJ6 1188 aa4.66□□□□□ -1.66
GTDC1-206ENST00000409214 CYFIP1Q7L576 1253 aa4.66□□□□□ -1.66
GTDC1-206ENST00000409214 TAGAPQ8N103 731 aa4.66□□□□□ -1.66
GTDC1-206ENST00000409214 WDTC1Q8N5D0 677 aa4.66□□□□□ -1.66
GTDC1-206ENST00000409214 DNAJB8Q8NHS0 232 aa4.66□□□□□ -1.66
GTDC1-206ENST00000409214 DDX54Q8TDD1 881 aaKnown RBP4.66□□□□□ -1.66
GTDC1-206ENST00000409214 SIPA1Q96FS4 1042 aa4.66□□□□□ -1.66
GTDC1-206ENST00000409214 DHRS1Q96LJ7 313 aa4.66□□□□□ -1.66
GTDC1-206ENST00000409214 FER1L6-AS2Q96M78 137 aa4.66□□□□□ -1.66
GTDC1-206ENST00000409214 NEK1Q96PY6 1258 aa4.66□□□□□ -1.66
GTDC1-206ENST00000409214 GDF15Q99988 308 aa4.66□□□□□ -1.66
GTDC1-206ENST00000409214 LZTS2Q9BRK4 669 aa4.66□□□□□ -1.66
GTDC1-206ENST00000409214 LACRTQ9GZZ8 138 aa4.66□□□□□ -1.66
GTDC1-206ENST00000409214 RUBCNLQ9H714 662 aa4.66□□□□□ -1.66
GTDC1-206ENST00000409214 ZDHHC3Q9NYG2 299 aa4.66□□□□□ -1.66
GTDC1-206ENST00000409214 CHORDC1Q9UHD1 332 aaPredicted RBP4.66□□□□□ -1.66
GTDC1-206ENST00000409214 TMEM5Q9Y2B1 443 aa4.66□□□□□ -1.66
GTDC1-206ENST00000409214 EXOC6BQ9Y2D4 811 aa4.66□□□□□ -1.66
GTDC1-206ENST00000409214 PCDHGA5Q9Y5G8 931 aa4.66□□□□□ -1.66
GTDC1-206ENST00000409214 PCDHGA1Q9Y5H4 931 aa4.66□□□□□ -1.66
GTDC1-206ENST00000409214 HS3ST4Q9Y661 456 aa4.66□□□□□ -1.66
GTDC1-206ENST00000409214 CD109Q6YHK3 1445 aa4.66□□□□□ -1.66
GTDC1-206ENST00000409214 H3BUI4 141 aa4.65□□□□□ -1.66
GTDC1-206ENST00000409214 TBC1D4O60343 1298 aa4.65□□□□□ -1.66
GTDC1-206ENST00000409214 PTBP3O95758 552 aaKnown RBP4.65□□□□□ -1.66
GTDC1-206ENST00000409214 AMY2AP04746 511 aa4.65□□□□□ -1.66
GTDC1-206ENST00000409214 GSPT1P15170 499 aaKnown RBP4.65□□□□□ -1.66
GTDC1-206ENST00000409214 AMY2BP19961 511 aa4.65□□□□□ -1.66
GTDC1-206ENST00000409214 HOXA10P31260 410 aaPredicted RBP4.65□□□□□ -1.66
GTDC1-206ENST00000409214 AKT1P31749 480 aa4.65□□□□□ -1.66
GTDC1-206ENST00000409214 PBX2P40425 430 aa4.65□□□□□ -1.66
GTDC1-206ENST00000409214 MANFP55145 182 aaKnown RBP4.65□□□□□ -1.66
GTDC1-206ENST00000409214 IRF3Q14653 427 aa4.65□□□□□ -1.66
GTDC1-206ENST00000409214 HIF1AQ16665 826 aa4.65□□□□□ -1.66
GTDC1-206ENST00000409214 CCDC57Q2TAC2 916 aa4.65□□□□□ -1.66
GTDC1-206ENST00000409214 CEP55Q53EZ4 464 aa4.65□□□□□ -1.66
GTDC1-206ENST00000409214 ZBTB37Q5TC79 503 aa4.65□□□□□ -1.66
GTDC1-206ENST00000409214 PLEKHM3Q6ZWE6 761 aa4.65□□□□□ -1.66
GTDC1-206ENST00000409214 PRICKLE2Q7Z3G6 844 aa4.65□□□□□ -1.66
GTDC1-206ENST00000409214 CXorf67Q86X51 503 aaPredicted RBP4.65□□□□□ -1.66
GTDC1-206ENST00000409214 LYSMD2Q8IV50 215 aa4.65□□□□□ -1.66
GTDC1-206ENST00000409214 BSNDQ8WZ55 320 aa4.65□□□□□ -1.66
GTDC1-206ENST00000409214 RGMAQ96B86 450 aa4.65□□□□□ -1.66
GTDC1-206ENST00000409214 ELMO3Q96BJ8 720 aa4.65□□□□□ -1.66
GTDC1-206ENST00000409214 RCC1LQ96I51 464 aaKnown RBP4.65□□□□□ -1.66
GTDC1-206ENST00000409214 VRK1Q99986 396 aaPredicted RBP4.65□□□□□ -1.66
GTDC1-206ENST00000409214 EDEM2Q9BV94 578 aa4.65□□□□□ -1.66
GTDC1-206ENST00000409214 TBC1D23Q9NUY8 699 aa4.65□□□□□ -1.66
GTDC1-206ENST00000409214 UBAP1Q9NZ09 502 aa4.65□□□□□ -1.66
GTDC1-206ENST00000409214 ZC3H7BQ9UGR2 993 aaKnown RBP4.65□□□□□ -1.66
GTDC1-206ENST00000409214 TMPRSS11EQ9UL52 423 aa4.65□□□□□ -1.66
GTDC1-206ENST00000409214 PCDHGC5Q9Y5F6 944 aa4.65□□□□□ -1.66
GTDC1-206ENST00000409214 PCDHA5Q9Y5H7 936 aa4.65□□□□□ -1.66
GTDC1-206ENST00000409214 CLTCL1P53675 1640 aa4.65□□□□□ -1.66
GTDC1-206ENST00000409214 SMIM30A4D0T7 59 aa4.65□□□□□ -1.67
GTDC1-206ENST00000409214 STX16-NPEPL1H3BU86 382 aa4.65□□□□□ -1.67
GTDC1-206ENST00000409214 GTPBP1O00178 669 aaKnown RBP4.65□□□□□ -1.67
GTDC1-206ENST00000409214 STX16O14662 325 aa4.65□□□□□ -1.67
GTDC1-206ENST00000409214 DNAJB1P25685 340 aa4.65□□□□□ -1.67
GTDC1-206ENST00000409214 CST5P28325 142 aaPredicted RBP4.65□□□□□ -1.67
GTDC1-206ENST00000409214 LSP1P33241 339 aa4.65□□□□□ -1.67
GTDC1-206ENST00000409214 IFNAR2P48551 515 aa4.65□□□□□ -1.67
GTDC1-206ENST00000409214 RABEP1Q15276 862 aa4.65□□□□□ -1.67
GTDC1-206ENST00000409214 PAN2Q504Q3 1202 aaKnown RBP4.65□□□□□ -1.67
GTDC1-206ENST00000409214 KLHL17Q6TDP4 642 aa4.65□□□□□ -1.67
GTDC1-206ENST00000409214 PRPF39Q86UA1 669 aaKnown RBP4.65□□□□□ -1.67
GTDC1-206ENST00000409214 TDRD5Q8NAT2 981 aaKnown RBP4.65□□□□□ -1.67
GTDC1-206ENST00000409214 SLC16A10Q8TF71 515 aa4.65□□□□□ -1.67
GTDC1-206ENST00000409214 TEKT1Q969V4 418 aa4.65□□□□□ -1.67
GTDC1-206ENST00000409214 NACC2Q96BF6 587 aa4.65□□□□□ -1.67
GTDC1-206ENST00000409214 NEIL1Q96FI4 390 aaPredicted RBP4.65□□□□□ -1.67
GTDC1-206ENST00000409214 COG3Q96JB2 828 aa4.65□□□□□ -1.67
GTDC1-206ENST00000409214 ATP6V0BQ99437 205 aa4.65□□□□□ -1.67
GTDC1-206ENST00000409214 MEIS3Q99687 375 aa4.65□□□□□ -1.67
GTDC1-206ENST00000409214 ACE2Q9BYF1 805 aaPredicted RBP4.65□□□□□ -1.67
GTDC1-206ENST00000409214 PBX4Q9BYU1 374 aa4.65□□□□□ -1.67
GTDC1-206ENST00000409214 MTMR12Q9C0I1 747 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms