RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 CBWD2Q8IUF1 395 aa10.4□□□□□ -0.74
NIF3L1-202ENST00000409020 BRSK2Q8IWQ3 736 aa10.4□□□□□ -0.74
NIF3L1-202ENST00000409020 CD302Q8IX05 232 aa10.4□□□□□ -0.74
NIF3L1-202ENST00000409020 SYCP3Q8IZU3 236 aa10.4□□□□□ -0.74
NIF3L1-202ENST00000409020 PYM1Q9BRP8 204 aaKnown RBP10.4□□□□□ -0.74
NIF3L1-202ENST00000409020 FOXQ1Q9C009 403 aa10.4□□□□□ -0.74
NIF3L1-202ENST00000409020 KCNH6Q9H252 994 aa10.4□□□□□ -0.74
NIF3L1-202ENST00000409020 PDE11AQ9HCR9 933 aa10.4□□□□□ -0.74
NIF3L1-202ENST00000409020 CHCHD3Q9NX63 227 aaKnown RBP10.4□□□□□ -0.74
NIF3L1-202ENST00000409020 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.4□□□□□ -0.74
NIF3L1-202ENST00000409020 CYB561D2O14569 222 aa10.39□□□□□ -0.75
NIF3L1-202ENST00000409020 XPOTO43592 962 aaKnown RBP10.39□□□□□ -0.75
NIF3L1-202ENST00000409020 HCRTO43612 131 aa10.39□□□□□ -0.75
NIF3L1-202ENST00000409020 SMC2O95347 1197 aa10.39□□□□□ -0.75
NIF3L1-202ENST00000409020 GLULP15104 373 aa10.39□□□□□ -0.75
NIF3L1-202ENST00000409020 PTPN2P17706 415 aa10.39□□□□□ -0.75
NIF3L1-202ENST00000409020 AOC1P19801 751 aa10.39□□□□□ -0.75
NIF3L1-202ENST00000409020 TYMPP19971 482 aa10.39□□□□□ -0.75
NIF3L1-202ENST00000409020 GARTP22102 1010 aa10.39□□□□□ -0.75
NIF3L1-202ENST00000409020 AFMP43652 599 aa10.39□□□□□ -0.75
NIF3L1-202ENST00000409020 PTPN5P54829 565 aa10.39□□□□□ -0.75
NIF3L1-202ENST00000409020 GPR17Q13304 367 aa10.39□□□□□ -0.75
NIF3L1-202ENST00000409020 SLC39A12Q504Y0 691 aa10.39□□□□□ -0.75
NIF3L1-202ENST00000409020 HSP90B2PQ58FF3 399 aa10.39□□□□□ -0.75
NIF3L1-202ENST00000409020 FAM78AQ5JUQ0 283 aa10.39□□□□□ -0.75
NIF3L1-202ENST00000409020 STXBP5Q5T5C0 1151 aa10.39□□□□□ -0.75
NIF3L1-202ENST00000409020 WSCD1Q658N2 575 aa10.39□□□□□ -0.75
NIF3L1-202ENST00000409020 CENPPQ6IPU0 288 aa10.39□□□□□ -0.75
NIF3L1-202ENST00000409020 LRRTM3Q86VH5 581 aa10.39□□□□□ -0.75
NIF3L1-202ENST00000409020 TMC8Q8IU68 726 aa10.39□□□□□ -0.75
NIF3L1-202ENST00000409020 GPIHBP1Q8IV16 184 aa10.39□□□□□ -0.75
NIF3L1-202ENST00000409020 CCDC65Q8IXS2 484 aa10.39□□□□□ -0.75
NIF3L1-202ENST00000409020 STKLD1Q8NE28 680 aa10.39□□□□□ -0.75
NIF3L1-202ENST00000409020 OR5B17Q8NGF7 314 aa10.39□□□□□ -0.75
NIF3L1-202ENST00000409020 GOLGA5Q8TBA6 731 aa10.39□□□□□ -0.75
NIF3L1-202ENST00000409020 KCNG4Q8TDN1 519 aa10.39□□□□□ -0.75
NIF3L1-202ENST00000409020 C7orf25Q9BPX7 421 aa10.39□□□□□ -0.75
NIF3L1-202ENST00000409020 LRRC3Q9BY71 257 aa10.39□□□□□ -0.75
NIF3L1-202ENST00000409020 MTMR12Q9C0I1 747 aa10.39□□□□□ -0.75
NIF3L1-202ENST00000409020 TBC1D17Q9HA65 648 aa10.39□□□□□ -0.75
NIF3L1-202ENST00000409020 ARHGEF3Q9NR81 526 aa10.39□□□□□ -0.75
NIF3L1-202ENST00000409020 IRAK4Q9NWZ3 460 aa10.39□□□□□ -0.75
NIF3L1-202ENST00000409020 WNT16Q9UBV4 365 aa10.39□□□□□ -0.75
NIF3L1-202ENST00000409020 SIX4Q9UIU6 781 aa10.39□□□□□ -0.75
NIF3L1-202ENST00000409020 KCNH3Q9ULD8 1083 aa10.39□□□□□ -0.75
NIF3L1-202ENST00000409020 EXOC7Q9UPT5 735 aa10.39□□□□□ -0.75
NIF3L1-202ENST00000409020 RRP15Q9Y3B9 282 aaKnown RBP10.39□□□□□ -0.75
NIF3L1-202ENST00000409020 OR6C75A6NL08 312 aa10.38□□□□□ -0.75
NIF3L1-202ENST00000409020 TGFB1I1O43294 461 aa10.38□□□□□ -0.75
NIF3L1-202ENST00000409020 EXTL3O43909 919 aa10.38□□□□□ -0.75
NIF3L1-202ENST00000409020 CYP11A1P05108 521 aa10.38□□□□□ -0.75
NIF3L1-202ENST00000409020 DCNP07585 359 aaKnown RBP10.38□□□□□ -0.75
NIF3L1-202ENST00000409020 MYL4P12829 197 aa10.38□□□□□ -0.75
NIF3L1-202ENST00000409020 CD72P21854 359 aa10.38□□□□□ -0.75
NIF3L1-202ENST00000409020 MLLT3P42568 568 aaPredicted RBP10.38□□□□□ -0.75
NIF3L1-202ENST00000409020 TAF6P49848 677 aa10.38□□□□□ -0.75
NIF3L1-202ENST00000409020 CLCN5P51795 746 aa10.38□□□□□ -0.75
NIF3L1-202ENST00000409020 TPM4P67936 248 aa10.38□□□□□ -0.75
NIF3L1-202ENST00000409020 EHHADHQ08426 723 aa10.38□□□□□ -0.75
NIF3L1-202ENST00000409020 SNW1Q13573 536 aaKnown RBP10.38□□□□□ -0.75
NIF3L1-202ENST00000409020 GRM2Q14416 872 aa10.38□□□□□ -0.75
NIF3L1-202ENST00000409020 ARMCX5Q6P1M9 558 aa10.38□□□□□ -0.75
NIF3L1-202ENST00000409020 PDZD4Q76G19 769 aaPredicted RBP10.38□□□□□ -0.75
NIF3L1-202ENST00000409020 RTL10Q7L3V2 364 aa10.38□□□□□ -0.75
NIF3L1-202ENST00000409020 NELFCDQ8IXH7 590 aa10.38□□□□□ -0.75
NIF3L1-202ENST00000409020 SHKBP1Q8TBC3 707 aa10.38□□□□□ -0.75
NIF3L1-202ENST00000409020 SCFD1Q8WVM8 642 aa10.38□□□□□ -0.75
NIF3L1-202ENST00000409020 NXPE3Q969Y0 559 aa10.38□□□□□ -0.75
NIF3L1-202ENST00000409020 RSPRY1Q96DX4 576 aa10.38□□□□□ -0.75
NIF3L1-202ENST00000409020 LPIN3Q9BQK8 851 aa10.38□□□□□ -0.75
NIF3L1-202ENST00000409020 SLC24A3Q9HC58 644 aa10.38□□□□□ -0.75
NIF3L1-202ENST00000409020 ZNF334Q9HCZ1 680 aaPredicted RBP10.38□□□□□ -0.75
NIF3L1-202ENST00000409020 AVENQ9NQS1 362 aaPredicted RBP10.38□□□□□ -0.75
NIF3L1-202ENST00000409020 SLC2A4RGQ9NR83 387 aa10.38□□□□□ -0.75
NIF3L1-202ENST00000409020 TMLHEQ9NVH6 421 aa10.38□□□□□ -0.75
NIF3L1-202ENST00000409020 RCOR1Q9UKL0 485 aa10.38□□□□□ -0.75
NIF3L1-202ENST00000409020 AGAP1Q9UPQ3 857 aa10.38□□□□□ -0.75
NIF3L1-202ENST00000409020 ZFP37Q9Y6Q3 630 aaPredicted RBP10.38□□□□□ -0.75
NIF3L1-202ENST00000409020 RIF1Q5UIP0 2472 aaKnown RBP10.38□□□□□ -0.75
NIF3L1-202ENST00000409020 SPTBN4Q9H254 2564 aa10.38□□□□□ -0.75
NIF3L1-202ENST00000409020 A0A1B0GVL5 298 aa10.38□□□□□ -0.75
NIF3L1-202ENST00000409020 KPNA7A9QM74 516 aa10.38□□□□□ -0.75
NIF3L1-202ENST00000409020 CLIC2O15247 247 aa10.38□□□□□ -0.75
NIF3L1-202ENST00000409020 ACTN4O43707 911 aaKnown RBP10.38□□□□□ -0.75
NIF3L1-202ENST00000409020 ZRANB2O95218 330 aaKnown RBP eCLIP10.38□□□□□ -0.75
NIF3L1-202ENST00000409020 IL18RAPO95256 599 aa10.38□□□□□ -0.75
NIF3L1-202ENST00000409020 ATF6P18850 670 aa10.38□□□□□ -0.75
NIF3L1-202ENST00000409020 VIPR2P41587 438 aa10.38□□□□□ -0.75
NIF3L1-202ENST00000409020 POSTNQ15063 836 aa10.38□□□□□ -0.75
NIF3L1-202ENST00000409020 TEAD2Q15562 447 aa10.38□□□□□ -0.75
NIF3L1-202ENST00000409020 FAM26FQ5R3K3 315 aa10.38□□□□□ -0.75
NIF3L1-202ENST00000409020 CNNM4Q6P4Q7 775 aa10.38□□□□□ -0.75
NIF3L1-202ENST00000409020 MTSS1LQ765P7 747 aa10.38□□□□□ -0.75
NIF3L1-202ENST00000409020 PACS2Q86VP3 889 aa10.38□□□□□ -0.75
NIF3L1-202ENST00000409020 GPD1LQ8N335 351 aa10.38□□□□□ -0.75
NIF3L1-202ENST00000409020 ZNF507Q8TCN5 953 aa10.38□□□□□ -0.75
NIF3L1-202ENST00000409020 FAXDC2Q96IV6 333 aa10.38□□□□□ -0.75
NIF3L1-202ENST00000409020 ZNF512Q96ME7 567 aaPredicted RBP10.38□□□□□ -0.75
NIF3L1-202ENST00000409020 ZCWPW1Q9H0M4 648 aa10.38□□□□□ -0.75
NIF3L1-202ENST00000409020 CUEDC2Q9H467 287 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms