RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 MPEG1Q2M385 716 aa5.9□□□□□ -1.46
HMGB1P13-201ENST00000406019 SLC35G1Q2M3R5 365 aa5.9□□□□□ -1.46
HMGB1P13-201ENST00000406019 TIGD2Q4W5G0 525 aa5.9□□□□□ -1.46
HMGB1P13-201ENST00000406019 KHDC1LQ5JSQ8 128 aa5.9□□□□□ -1.46
HMGB1P13-201ENST00000406019 KCNV1Q6PIU1 500 aa5.9□□□□□ -1.46
HMGB1P13-201ENST00000406019 SYNE4Q8N205 404 aa5.9□□□□□ -1.46
HMGB1P13-201ENST00000406019 MYCT1Q8N699 235 aa5.9□□□□□ -1.46
HMGB1P13-201ENST00000406019 PAF1Q8N7H5 531 aa5.9□□□□□ -1.46
HMGB1P13-201ENST00000406019 CPEB3Q8NE35 698 aaKnown RBP5.9□□□□□ -1.46
HMGB1P13-201ENST00000406019 AGAP2Q99490 1192 aa5.9□□□□□ -1.46
HMGB1P13-201ENST00000406019 BRIP1Q9BX63 1249 aa5.9□□□□□ -1.46
HMGB1P13-201ENST00000406019 TRIM54Q9BYV2 358 aa5.9□□□□□ -1.46
HMGB1P13-201ENST00000406019 C11orf54Q9H0W9 315 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P13-201ENST00000406019 C9orf78Q9NZ63 289 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P13-201ENST00000406019 CPA4Q9UI42 421 aa5.9□□□□□ -1.46
HMGB1P13-201ENST00000406019 PCDHA6Q9UN73 950 aa5.9□□□□□ -1.46
HMGB1P13-201ENST00000406019 MAP3K2Q9Y2U5 619 aa5.9□□□□□ -1.46
HMGB1P13-201ENST00000406019 PCDHA1Q9Y5I3 950 aa5.9□□□□□ -1.46
HMGB1P13-201ENST00000406019 A0A1B0GTW7 788 aa5.89□□□□□ -1.47
HMGB1P13-201ENST00000406019 F2RL2O00254 374 aa5.89□□□□□ -1.47
HMGB1P13-201ENST00000406019 PLA2G6O60733 806 aa5.89□□□□□ -1.47
HMGB1P13-201ENST00000406019 SPDEFO95238 335 aa5.89□□□□□ -1.47
HMGB1P13-201ENST00000406019 HARSP12081 509 aaKnown RBP5.89□□□□□ -1.47
HMGB1P13-201ENST00000406019 FGFR4P22455 802 aa5.89□□□□□ -1.47
HMGB1P13-201ENST00000406019 SMARCA1P28370 1054 aa5.89□□□□□ -1.47
HMGB1P13-201ENST00000406019 HMGA2P52926 109 aa5.89□□□□□ -1.47
HMGB1P13-201ENST00000406019 MAPK10P53779 464 aa5.89□□□□□ -1.47
HMGB1P13-201ENST00000406019 BLMHQ13867 455 aa5.89□□□□□ -1.47
HMGB1P13-201ENST00000406019 MAPRE1Q15691 268 aaKnown RBP5.89□□□□□ -1.47
HMGB1P13-201ENST00000406019 CCDC38Q502W7 563 aa5.89□□□□□ -1.47
HMGB1P13-201ENST00000406019 LY6G5CQ5SRR4 150 aa5.89□□□□□ -1.47
HMGB1P13-201ENST00000406019 PGBD2Q6P3X8 592 aa5.89□□□□□ -1.47
HMGB1P13-201ENST00000406019 LVRNQ6Q4G3 990 aa5.89□□□□□ -1.47
HMGB1P13-201ENST00000406019 Q6YL49 198 aa5.89□□□□□ -1.47
HMGB1P13-201ENST00000406019 MAPKAPK5Q8IW41 473 aa5.89□□□□□ -1.47
HMGB1P13-201ENST00000406019 SYTL1Q8IYJ3 562 aa5.89□□□□□ -1.47
HMGB1P13-201ENST00000406019 TMEM132CQ8N3T6 1108 aa5.89□□□□□ -1.47
HMGB1P13-201ENST00000406019 CCDC33Q8N5R6 958 aa5.89□□□□□ -1.47
HMGB1P13-201ENST00000406019 Q8NA96 180 aa5.89□□□□□ -1.47
HMGB1P13-201ENST00000406019 ATP11CQ8NB49 1132 aa5.89□□□□□ -1.47
HMGB1P13-201ENST00000406019 BRIX1Q8TDN6 353 aaKnown RBP5.89□□□□□ -1.47
HMGB1P13-201ENST00000406019 ASB10Q8WXI3 467 aa5.89□□□□□ -1.47
HMGB1P13-201ENST00000406019 MAML1Q92585 1016 aa5.89□□□□□ -1.47
HMGB1P13-201ENST00000406019 NACC2Q96BF6 587 aa5.89□□□□□ -1.47
HMGB1P13-201ENST00000406019 ZSWIM1Q9BR11 485 aa5.89□□□□□ -1.47
HMGB1P13-201ENST00000406019 MYLK2Q9H1R3 596 aa5.89□□□□□ -1.47
HMGB1P13-201ENST00000406019 SERHL2Q9H4I8 314 aa5.89□□□□□ -1.47
HMGB1P13-201ENST00000406019 CNNM1Q9NRU3 951 aa5.89□□□□□ -1.47
HMGB1P13-201ENST00000406019 SIDT1Q9NXL6 827 aaKnown RBP5.89□□□□□ -1.47
HMGB1P13-201ENST00000406019 ANKFY1Q9P2R3 1169 aa5.89□□□□□ -1.47
HMGB1P13-201ENST00000406019 MYO1AQ9UBC5 1043 aa5.89□□□□□ -1.47
HMGB1P13-201ENST00000406019 HSFX1Q9UBD0 423 aa5.89□□□□□ -1.47
HMGB1P13-201ENST00000406019 AFF4Q9UHB7 1163 aaKnown RBP5.89□□□□□ -1.47
HMGB1P13-201ENST00000406019 FFAR2O15552 330 aa5.88□□□□□ -1.47
HMGB1P13-201ENST00000406019 ZFPL1O95159 310 aa5.88□□□□□ -1.47
HMGB1P13-201ENST00000406019 CSTBP04080 98 aaKnown RBP5.88□□□□□ -1.47
HMGB1P13-201ENST00000406019 SPATA31D3P0C874 917 aa5.88□□□□□ -1.47
HMGB1P13-201ENST00000406019 DDX6P26196 483 aaKnown RBP eCLIP5.88□□□□□ -1.47
HMGB1P13-201ENST00000406019 PDIA3P30101 505 aaKnown RBP5.88□□□□□ -1.47
HMGB1P13-201ENST00000406019 NOMO3P69849 1222 aa5.88□□□□□ -1.47
HMGB1P13-201ENST00000406019 TP53BP2Q13625 1128 aa5.88□□□□□ -1.47
HMGB1P13-201ENST00000406019 KRTAP15-1Q3LI76 137 aa5.88□□□□□ -1.47
HMGB1P13-201ENST00000406019 ARL13BQ3SXY8 428 aa5.88□□□□□ -1.47
HMGB1P13-201ENST00000406019 NOMO2Q5JPE7 1267 aa5.88□□□□□ -1.47
HMGB1P13-201ENST00000406019 KLHDC7AQ5VTJ3 777 aa5.88□□□□□ -1.47
HMGB1P13-201ENST00000406019 TSHZ3Q63HK5 1081 aa5.88□□□□□ -1.47
HMGB1P13-201ENST00000406019 SPATA31D4Q6ZUB0 917 aa5.88□□□□□ -1.47
HMGB1P13-201ENST00000406019 MRGPRGQ86SM5 289 aa5.88□□□□□ -1.47
HMGB1P13-201ENST00000406019 TEX19Q8NA77 164 aa5.88□□□□□ -1.47
HMGB1P13-201ENST00000406019 ZNF527Q8NB42 609 aa5.88□□□□□ -1.47
HMGB1P13-201ENST00000406019 IL17RDQ8NFM7 739 aa5.88□□□□□ -1.47
HMGB1P13-201ENST00000406019 LINC00476Q8WZB0 136 aa5.88□□□□□ -1.47
HMGB1P13-201ENST00000406019 GCC1Q96CN9 775 aa5.88□□□□□ -1.47
HMGB1P13-201ENST00000406019 PHACTR3Q96KR7 559 aa5.88□□□□□ -1.47
HMGB1P13-201ENST00000406019 STK33Q9BYT3 514 aa5.88□□□□□ -1.47
HMGB1P13-201ENST00000406019 SMURF2Q9HAU4 748 aa5.88□□□□□ -1.47
HMGB1P13-201ENST00000406019 ALG13Q9NP73 1137 aaKnown RBP5.88□□□□□ -1.47
HMGB1P13-201ENST00000406019 TMEM74BQ9NUR3 256 aa5.88□□□□□ -1.47
HMGB1P13-201ENST00000406019 RGS17Q9UGC6 210 aaPredicted RBP5.88□□□□□ -1.47
HMGB1P13-201ENST00000406019 ATP11BQ9Y2G3 1177 aa5.88□□□□□ -1.47
HMGB1P13-201ENST00000406019 MED16Q9Y2X0 877 aa5.88□□□□□ -1.47
HMGB1P13-201ENST00000406019 DMRT1Q9Y5R6 373 aa5.88□□□□□ -1.47
HMGB1P13-201ENST00000406019 PIPSLA2A3N6 862 aa5.87□□□□□ -1.47
HMGB1P13-201ENST00000406019 CDHR4A6H8M9 788 aa5.87□□□□□ -1.47
HMGB1P13-201ENST00000406019 TRIM43BA6NCK2 446 aa5.87□□□□□ -1.47
HMGB1P13-201ENST00000406019 GRM6O15303 877 aa5.87□□□□□ -1.47
HMGB1P13-201ENST00000406019 MATN4O95460 622 aa5.87□□□□□ -1.47
HMGB1P13-201ENST00000406019 AHSGP02765 367 aa5.87□□□□□ -1.47
HMGB1P13-201ENST00000406019 EGR2P11161 476 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P13-201ENST00000406019 FCER1AP12319 257 aa5.87□□□□□ -1.47
HMGB1P13-201ENST00000406019 VEGFAP15692 232 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P13-201ENST00000406019 FGFR2P21802 821 aa5.87□□□□□ -1.47
HMGB1P13-201ENST00000406019 EEF1GP26641 437 aaKnown RBP5.87□□□□□ -1.47
HMGB1P13-201ENST00000406019 TGFB2P61812 414 aa5.87□□□□□ -1.47
HMGB1P13-201ENST00000406019 GALNT1Q10472 559 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P13-201ENST00000406019 STARD3Q14849 445 aa5.87□□□□□ -1.47
HMGB1P13-201ENST00000406019 C3orf38Q5JPI3 329 aa5.87□□□□□ -1.47
HMGB1P13-201ENST00000406019 MMS22LQ6ZRQ5 1243 aa5.87□□□□□ -1.47
HMGB1P13-201ENST00000406019 CACNA2D3Q8IZS8 1091 aa5.87□□□□□ -1.47
HMGB1P13-201ENST00000406019 IL17REQ8NFR9 667 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms