RNA–Protein interactions for RNA: ENST00000404321.3

PTPRN2-204, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 5 BASIC

Gene PTPRN2, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-204ENST00000404321 GDE1Q9NZC3 331 aa19.45■□□□□ 0.7
PTPRN2-204ENST00000404321 HSFX1Q9UBD0 423 aa19.45■□□□□ 0.7
PTPRN2-204ENST00000404321 CA14Q9ULX7 337 aa19.45■□□□□ 0.7
PTPRN2-204ENST00000404321 DOCK8Q8NF50 2099 aa19.45■□□□□ 0.7
PTPRN2-204ENST00000404321 VNN1O95497 513 aa19.44■□□□□ 0.7
PTPRN2-204ENST00000404321 SRFP11831 508 aa19.44■□□□□ 0.7
PTPRN2-204ENST00000404321 WARSP23381 471 aaKnown RBP19.44■□□□□ 0.7
PTPRN2-204ENST00000404321 RPL13P26373 211 aaKnown RBP19.44■□□□□ 0.7
PTPRN2-204ENST00000404321 VAMP7P51809 220 aa19.44■□□□□ 0.7
PTPRN2-204ENST00000404321 AP3M2P53677 418 aa19.44■□□□□ 0.7
PTPRN2-204ENST00000404321 TAF12Q16514 161 aa19.44■□□□□ 0.7
PTPRN2-204ENST00000404321 NFE2Q16621 373 aaPredicted RBP19.44■□□□□ 0.7
PTPRN2-204ENST00000404321 NFIL3Q16649 462 aa19.44■□□□□ 0.7
PTPRN2-204ENST00000404321 DDR2Q16832 855 aa19.44■□□□□ 0.7
PTPRN2-204ENST00000404321 ZNF699Q32M78 642 aa19.44■□□□□ 0.7
PTPRN2-204ENST00000404321 STXBP5Q5T5C0 1151 aa19.44■□□□□ 0.7
PTPRN2-204ENST00000404321 TANGO2Q6ICL3 276 aa19.44■□□□□ 0.7
PTPRN2-204ENST00000404321 ITIH5Q86UX2 942 aa19.44■□□□□ 0.7
PTPRN2-204ENST00000404321 GPIHBP1Q8IV16 184 aa19.44■□□□□ 0.7
PTPRN2-204ENST00000404321 OR6B3Q8NGW1 331 aa19.44■□□□□ 0.7
PTPRN2-204ENST00000404321 SPATA20Q8TB22 786 aa19.44■□□□□ 0.7
PTPRN2-204ENST00000404321 SPATA18Q8TC71 538 aa19.44■□□□□ 0.7
PTPRN2-204ENST00000404321 PLA2G2FQ9BZM2 168 aa19.44■□□□□ 0.7
PTPRN2-204ENST00000404321 ASB3Q9Y575 518 aa19.44■□□□□ 0.7
PTPRN2-204ENST00000404321 NME7Q9Y5B8 376 aa19.44■□□□□ 0.7
PTPRN2-204ENST00000404321 NOTCH4Q99466 2003 aa19.44■□□□□ 0.7
PTPRN2-204ENST00000404321 MICAL2O94851 1124 aa19.44■□□□□ 0.7
PTPRN2-204ENST00000404321 GABRR2P28476 465 aa19.44■□□□□ 0.7
PTPRN2-204ENST00000404321 ATICP31939 592 aa19.44■□□□□ 0.7
PTPRN2-204ENST00000404321 GNL1P36915 607 aaPredicted RBP19.44■□□□□ 0.7
PTPRN2-204ENST00000404321 RAP1GAPP47736 663 aa19.44■□□□□ 0.7
PTPRN2-204ENST00000404321 SV2AQ7L0J3 742 aa19.44■□□□□ 0.7
PTPRN2-204ENST00000404321 SPATA2LQ8IUW3 424 aaPredicted RBP19.44■□□□□ 0.7
PTPRN2-204ENST00000404321 MYLPFQ96A32 169 aa19.44■□□□□ 0.7
PTPRN2-204ENST00000404321 ATXN3LQ9H3M9 355 aa19.44■□□□□ 0.7
PTPRN2-204ENST00000404321 SMYD3Q9H7B4 428 aa19.44■□□□□ 0.7
PTPRN2-204ENST00000404321 CRTAC1Q9NQ79 661 aa19.44■□□□□ 0.7
PTPRN2-204ENST00000404321 MAN1B1Q9UKM7 699 aa19.44■□□□□ 0.7
PTPRN2-204ENST00000404321 CDH9Q9ULB4 789 aa19.44■□□□□ 0.7
PTPRN2-204ENST00000404321 KRT13P13646 458 aa19.43■□□□□ 0.7
PTPRN2-204ENST00000404321 FCARP24071 287 aa19.43■□□□□ 0.7
PTPRN2-204ENST00000404321 PSMC2P35998 433 aaKnown RBP19.43■□□□□ 0.7
PTPRN2-204ENST00000404321 VIPR2P41587 438 aa19.43■□□□□ 0.7
PTPRN2-204ENST00000404321 GCLMP48507 274 aa19.43■□□□□ 0.7
PTPRN2-204ENST00000404321 PMS1P54277 932 aaKnown RBP19.43■□□□□ 0.7
PTPRN2-204ENST00000404321 CDH8P55286 799 aa19.43■□□□□ 0.7
PTPRN2-204ENST00000404321 CYP27A1Q02318 531 aa19.43■□□□□ 0.7
PTPRN2-204ENST00000404321 GRM2Q14416 872 aa19.43■□□□□ 0.7
PTPRN2-204ENST00000404321 ZACNQ401N2 412 aa19.43■□□□□ 0.7
PTPRN2-204ENST00000404321 IER5LQ5T953 404 aa19.43■□□□□ 0.7
PTPRN2-204ENST00000404321 GAREM2Q75VX8 874 aa19.43■□□□□ 0.7
PTPRN2-204ENST00000404321 ZSCAN18Q8TBC5 510 aaPredicted RBP19.43■□□□□ 0.7
PTPRN2-204ENST00000404321 DPEP3Q9H4B8 488 aa19.43■□□□□ 0.7
PTPRN2-204ENST00000404321 MAGED2Q9UNF1 606 aaPredicted RBP19.43■□□□□ 0.7
PTPRN2-204ENST00000404321 ZDBF2Q9HCK1 2354 aa19.42■□□□□ 0.7
PTPRN2-204ENST00000404321 KRBA1A5PL33 1030 aa19.42■□□□□ 0.7
PTPRN2-204ENST00000404321 TRIM49BA6NDI0 452 aa19.42■□□□□ 0.7
PTPRN2-204ENST00000404321 BIN1O00499 593 aa19.42■□□□□ 0.7
PTPRN2-204ENST00000404321 STK25O00506 426 aa19.42■□□□□ 0.7
PTPRN2-204ENST00000404321 TACC1O75410 805 aa19.42■□□□□ 0.7
PTPRN2-204ENST00000404321 ECI2O75521 394 aa19.42■□□□□ 0.7
PTPRN2-204ENST00000404321 STAU1O95793 577 aaKnown RBP19.42■□□□□ 0.7
PTPRN2-204ENST00000404321 PIK3CAP42336 1068 aa19.42■□□□□ 0.7
PTPRN2-204ENST00000404321 CYP4F8P98187 520 aa19.42■□□□□ 0.7
PTPRN2-204ENST00000404321 PPP3CAQ08209 521 aa19.42■□□□□ 0.7
PTPRN2-204ENST00000404321 EDRF1Q3B7T1 1238 aa19.42■□□□□ 0.7
PTPRN2-204ENST00000404321 ZNF667Q5HYK9 610 aa19.42■□□□□ 0.7
PTPRN2-204ENST00000404321 MDH1BQ5I0G3 518 aa19.42■□□□□ 0.7
PTPRN2-204ENST00000404321 ANKRD40Q6AI12 368 aa19.42■□□□□ 0.7
PTPRN2-204ENST00000404321 SPOPLQ6IQ16 392 aa19.42■□□□□ 0.7
PTPRN2-204ENST00000404321 FAM171BQ6P995 826 aa19.42■□□□□ 0.7
PTPRN2-204ENST00000404321 INTS8Q75QN2 995 aaKnown RBP19.42■□□□□ 0.7
PTPRN2-204ENST00000404321 SCN4BQ8IWT1 228 aa19.42■□□□□ 0.7
PTPRN2-204ENST00000404321 ADSSL1Q8N142 457 aa19.42■□□□□ 0.7
PTPRN2-204ENST00000404321 SMARCD2Q92925 531 aa19.42■□□□□ 0.7
PTPRN2-204ENST00000404321 ASB16Q96NS5 453 aa19.42■□□□□ 0.7
PTPRN2-204ENST00000404321 ZFP14Q9HCL3 533 aa19.42■□□□□ 0.7
PTPRN2-204ENST00000404321 WNT16Q9UBV4 365 aa19.42■□□□□ 0.7
PTPRN2-204ENST00000404321 A8MXQ7 604 aa19.41■□□□□ 0.7
PTPRN2-204ENST00000404321 IKBKBO14920 756 aa19.41■□□□□ 0.7
PTPRN2-204ENST00000404321 CETN3O15182 167 aa19.41■□□□□ 0.7
PTPRN2-204ENST00000404321 MAPK13O15264 365 aa19.41■□□□□ 0.7
PTPRN2-204ENST00000404321 HLA-DRAP01903 254 aa19.41■□□□□ 0.7
PTPRN2-204ENST00000404321 NPR3P17342 541 aa19.41■□□□□ 0.7
PTPRN2-204ENST00000404321 AVPR2P30518 371 aa19.41■□□□□ 0.7
PTPRN2-204ENST00000404321 GPR158Q5T848 1215 aa19.41■□□□□ 0.7
PTPRN2-204ENST00000404321 TSG101Q99816 390 aa19.41■□□□□ 0.7
PTPRN2-204ENST00000404321 SDCBP2Q9H190 292 aa19.41■□□□□ 0.7
PTPRN2-204ENST00000404321 IL21Q9HBE4 155 aa19.41■□□□□ 0.7
PTPRN2-204ENST00000404321 ABCB6Q9NP58 842 aa19.41■□□□□ 0.7
PTPRN2-204ENST00000404321 SLC2A4RGQ9NR83 387 aa19.41■□□□□ 0.7
PTPRN2-204ENST00000404321 CD44P16070 742 aaKnown RBP19.4■□□□□ 0.7
PTPRN2-204ENST00000404321 HMGA1P17096 107 aaKnown RBP19.4■□□□□ 0.7
PTPRN2-204ENST00000404321 RFX1P22670 979 aa19.4■□□□□ 0.7
PTPRN2-204ENST00000404321 BDNFP23560 247 aa19.4■□□□□ 0.7
PTPRN2-204ENST00000404321 RPL10AP62906 217 aaKnown RBP19.4■□□□□ 0.7
PTPRN2-204ENST00000404321 SGSM1Q2NKQ1 1148 aa19.4■□□□□ 0.7
PTPRN2-204ENST00000404321 CFAP221Q4G0U5 840 aa19.4■□□□□ 0.7
PTPRN2-204ENST00000404321 CWF19L1Q69YN2 538 aaKnown RBP19.4■□□□□ 0.7
PTPRN2-204ENST00000404321 C4orf50Q6ZRC1 276 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms