RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 PSMC3P17980 439 aa14.27□□□□□ -0.13
SDF4-203ENST00000403997 CD72P21854 359 aa14.27□□□□□ -0.13
SDF4-203ENST00000403997 CDC25CP30307 473 aa14.27□□□□□ -0.13
SDF4-203ENST00000403997 GPR15P49685 360 aa14.27□□□□□ -0.13
SDF4-203ENST00000403997 ANGPT1Q15389 498 aa14.27□□□□□ -0.13
SDF4-203ENST00000403997 STXBP5Q5T5C0 1151 aa14.27□□□□□ -0.13
SDF4-203ENST00000403997 TPRG1Q6ZUI0 275 aa14.27□□□□□ -0.13
SDF4-203ENST00000403997 ARID3BQ8IVW6 561 aaPredicted RBP14.27□□□□□ -0.13
SDF4-203ENST00000403997 MFSD6LQ8IWD5 586 aa14.27□□□□□ -0.13
SDF4-203ENST00000403997 YAF2Q8IY57 180 aa14.27□□□□□ -0.13
SDF4-203ENST00000403997 DEPDC1BQ8WUY9 529 aa14.27□□□□□ -0.13
SDF4-203ENST00000403997 ZNF516Q92618 1163 aa14.27□□□□□ -0.13
SDF4-203ENST00000403997 E2F7Q96AV8 911 aa14.27□□□□□ -0.13
SDF4-203ENST00000403997 HEBP1Q9NRV9 189 aa14.27□□□□□ -0.13
SDF4-203ENST00000403997 TSC2P49815 1807 aa14.27□□□□□ -0.13
SDF4-203ENST00000403997 DPYSL4O14531 572 aa14.26□□□□□ -0.13
SDF4-203ENST00000403997 ZNF263O14978 683 aa14.26□□□□□ -0.13
SDF4-203ENST00000403997 HCRTO43612 131 aa14.26□□□□□ -0.13
SDF4-203ENST00000403997 PHACTR2O75167 634 aa14.26□□□□□ -0.13
SDF4-203ENST00000403997 ATP2C2O75185 946 aa14.26□□□□□ -0.13
SDF4-203ENST00000403997 LRRN2O75325 713 aa14.26□□□□□ -0.13
SDF4-203ENST00000403997 ZNF202O95125 648 aa14.26□□□□□ -0.13
SDF4-203ENST00000403997 PDGFRBP09619 1106 aa14.26□□□□□ -0.13
SDF4-203ENST00000403997 PRR29P0C7W0 189 aa14.26□□□□□ -0.13
SDF4-203ENST00000403997 CYP2F1P24903 491 aa14.26□□□□□ -0.13
SDF4-203ENST00000403997 LMO2P25791 158 aa14.26□□□□□ -0.13
SDF4-203ENST00000403997 RPL10AP62906 217 aaKnown RBP14.26□□□□□ -0.13
SDF4-203ENST00000403997 CYP4F8P98187 520 aa14.26□□□□□ -0.13
SDF4-203ENST00000403997 TRPC3Q13507 836 aa14.26□□□□□ -0.13
SDF4-203ENST00000403997 DDR2Q16832 855 aa14.26□□□□□ -0.13
SDF4-203ENST00000403997 SDHAF4Q5VUM1 108 aa14.26□□□□□ -0.13
SDF4-203ENST00000403997 LIMS2Q7Z4I7 341 aa14.26□□□□□ -0.13
SDF4-203ENST00000403997 SPATA2LQ8IUW3 424 aaPredicted RBP14.26□□□□□ -0.13
SDF4-203ENST00000403997 DNASE1L2Q92874 299 aa14.26□□□□□ -0.13
SDF4-203ENST00000403997 IRF7Q92985 503 aa14.26□□□□□ -0.13
SDF4-203ENST00000403997 PKMYT1Q99640 499 aa14.26□□□□□ -0.13
SDF4-203ENST00000403997 DDX23Q9BUQ8 820 aaKnown RBP14.26□□□□□ -0.13
SDF4-203ENST00000403997 KCTD10Q9H3F6 313 aa14.26□□□□□ -0.13
SDF4-203ENST00000403997 GOLPH3LQ9H4A5 285 aa14.26□□□□□ -0.13
SDF4-203ENST00000403997 TASP1Q9H6P5 420 aa14.26□□□□□ -0.13
SDF4-203ENST00000403997 IL21Q9HBE4 155 aa14.26□□□□□ -0.13
SDF4-203ENST00000403997 ABCB6Q9NP58 842 aa14.26□□□□□ -0.13
SDF4-203ENST00000403997 DMAC2Q9NW81 257 aa14.26□□□□□ -0.13
SDF4-203ENST00000403997 CDH9Q9ULB4 789 aa14.26□□□□□ -0.13
SDF4-203ENST00000403997 MAGED2Q9UNF1 606 aaPredicted RBP14.26□□□□□ -0.13
SDF4-203ENST00000403997 MTF2Q9Y483 593 aaPredicted RBP14.26□□□□□ -0.13
SDF4-203ENST00000403997 MYBPHLA2RUH7 354 aa14.25□□□□□ -0.13
SDF4-203ENST00000403997 PDXKO00764 312 aa14.25□□□□□ -0.13
SDF4-203ENST00000403997 CSH1P0DML2 217 aa14.25□□□□□ -0.13
SDF4-203ENST00000403997 CSH2P0DML3 217 aa14.25□□□□□ -0.13
SDF4-203ENST00000403997 GLULP15104 373 aa14.25□□□□□ -0.13
SDF4-203ENST00000403997 WARSP23381 471 aaKnown RBP14.25□□□□□ -0.13
SDF4-203ENST00000403997 GNL1P36915 607 aaPredicted RBP14.25□□□□□ -0.13
SDF4-203ENST00000403997 CASP4P49662 377 aa14.25□□□□□ -0.13
SDF4-203ENST00000403997 MYL6P60660 151 aa14.25□□□□□ -0.13
SDF4-203ENST00000403997 TNNC1P63316 161 aa14.25□□□□□ -0.13
SDF4-203ENST00000403997 CCDC142Q17RM4 750 aa14.25□□□□□ -0.13
SDF4-203ENST00000403997 WDR72Q3MJ13 1102 aa14.25□□□□□ -0.13
SDF4-203ENST00000403997 FAM171BQ6P995 826 aa14.25□□□□□ -0.13
SDF4-203ENST00000403997 ZNF852Q6ZMS4 543 aa14.25□□□□□ -0.13
SDF4-203ENST00000403997 KRBA2Q6ZNG9 492 aa14.25□□□□□ -0.13
SDF4-203ENST00000403997 SLC9A9Q8IVB4 645 aa14.25□□□□□ -0.13
SDF4-203ENST00000403997 SCN4BQ8IWT1 228 aa14.25□□□□□ -0.13
SDF4-203ENST00000403997 STKLD1Q8NE28 680 aa14.25□□□□□ -0.13
SDF4-203ENST00000403997 KBTBD7Q8WVZ9 684 aa14.25□□□□□ -0.13
SDF4-203ENST00000403997 NELL2Q99435 816 aa14.25□□□□□ -0.13
SDF4-203ENST00000403997 SYT15Q9BQS2 421 aa14.25□□□□□ -0.13
SDF4-203ENST00000403997 MKNK1Q9BUB5 465 aa14.25□□□□□ -0.13
SDF4-203ENST00000403997 BCO2Q9BYV7 579 aa14.25□□□□□ -0.13
SDF4-203ENST00000403997 SNX25Q9H3E2 840 aa14.25□□□□□ -0.13
SDF4-203ENST00000403997 LTB4R2Q9NPC1 389 aa14.25□□□□□ -0.13
SDF4-203ENST00000403997 DLGAP2Q9P1A6 1054 aa14.25□□□□□ -0.13
SDF4-203ENST00000403997 MAGEC2Q9UBF1 373 aaPredicted RBP14.25□□□□□ -0.13
SDF4-203ENST00000403997 MRPS17Q9Y2R5 130 aaKnown RBP14.25□□□□□ -0.13
SDF4-203ENST00000403997 NCANO14594 1321 aa14.24□□□□□ -0.13
SDF4-203ENST00000403997 CALUO43852 315 aaPredicted RBP14.24□□□□□ -0.13
SDF4-203ENST00000403997 RHOBTB3O94955 611 aa14.24□□□□□ -0.13
SDF4-203ENST00000403997 CLSTN1O94985 981 aa14.24□□□□□ -0.13
SDF4-203ENST00000403997 KIF20AO95235 890 aa14.24□□□□□ -0.13
SDF4-203ENST00000403997 F11P03951 625 aa14.24□□□□□ -0.13
SDF4-203ENST00000403997 NR3C1P04150 777 aa14.24□□□□□ -0.13
SDF4-203ENST00000403997 HMGA1P17096 107 aaKnown RBP14.24□□□□□ -0.13
SDF4-203ENST00000403997 ATICP31939 592 aa14.24□□□□□ -0.13
SDF4-203ENST00000403997 AP3M2P53677 418 aa14.24□□□□□ -0.13
SDF4-203ENST00000403997 NLRP12P59046 1061 aa14.24□□□□□ -0.13
SDF4-203ENST00000403997 PSMC1P62191 440 aaKnown RBP14.24□□□□□ -0.13
SDF4-203ENST00000403997 NUCB2P80303 420 aa14.24□□□□□ -0.13
SDF4-203ENST00000403997 DPYDQ12882 1025 aa14.24□□□□□ -0.13
SDF4-203ENST00000403997 BIRC3Q13489 604 aa14.24□□□□□ -0.13
SDF4-203ENST00000403997 MAPRE1Q15691 268 aaKnown RBP14.24□□□□□ -0.13
SDF4-203ENST00000403997 CEP135Q66GS9 1140 aa14.24□□□□□ -0.13
SDF4-203ENST00000403997 C4orf50Q6ZRC1 276 aa14.24□□□□□ -0.13
SDF4-203ENST00000403997 C1orf210Q8IVY1 113 aa14.24□□□□□ -0.13
SDF4-203ENST00000403997 OR6B3Q8NGW1 331 aa14.24□□□□□ -0.13
SDF4-203ENST00000403997 PLEKHO2Q8TD55 490 aa14.24□□□□□ -0.13
SDF4-203ENST00000403997 PARD3BQ8TEW8 1205 aa14.24□□□□□ -0.13
SDF4-203ENST00000403997 SYAP1Q96A49 352 aaPredicted RBP14.24□□□□□ -0.13
SDF4-203ENST00000403997 RSPRY1Q96DX4 576 aa14.24□□□□□ -0.13
SDF4-203ENST00000403997 CCDC34Q96HJ3 373 aa14.24□□□□□ -0.13
SDF4-203ENST00000403997 FUBP3Q96I24 572 aaKnown RBP eCLIP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms