RNA–Protein interactions for RNA: ENST00000399409.7

RABGGTA-202, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-202ENST00000399409 TNFSF13BQ9Y275 285 aa24.32■■□□□ 1.48
RABGGTA-202ENST00000399409 C3orf70A6NLC5 250 aaPredicted RBP24.31■■□□□ 1.48
RABGGTA-202ENST00000399409 RASA4BC9J798 803 aa24.31■■□□□ 1.48
RABGGTA-202ENST00000399409 SOCS7O14512 581 aa24.31■■□□□ 1.48
RABGGTA-202ENST00000399409 IRF6O14896 467 aa24.31■■□□□ 1.48
RABGGTA-202ENST00000399409 RASA4O43374 803 aa24.31■■□□□ 1.48
RABGGTA-202ENST00000399409 TMED2Q15363 201 aa24.31■■□□□ 1.48
RABGGTA-202ENST00000399409 TMEM132AQ24JP5 1023 aa24.31■■□□□ 1.48
RABGGTA-202ENST00000399409 ZNF667Q5HYK9 610 aa24.31■■□□□ 1.48
RABGGTA-202ENST00000399409 GRAMD1AQ96CP6 724 aa24.31■■□□□ 1.48
RABGGTA-202ENST00000399409 RPF1Q9H9Y2 349 aaKnown RBP24.31■■□□□ 1.48
RABGGTA-202ENST00000399409 SENP1Q9P0U3 644 aa24.31■■□□□ 1.48
RABGGTA-202ENST00000399409 ARL2BPQ9Y2Y0 163 aa24.31■■□□□ 1.48
RABGGTA-202ENST00000399409 CD19P15391 556 aa24.31■■□□□ 1.48
RABGGTA-202ENST00000399409 GTF2A1P52655 376 aaPredicted RBP24.31■■□□□ 1.48
RABGGTA-202ENST00000399409 SLC18A1P54219 525 aa24.31■■□□□ 1.48
RABGGTA-202ENST00000399409 IL9RQ01113 521 aa24.31■■□□□ 1.48
RABGGTA-202ENST00000399409 PLCB3Q01970 1234 aa24.31■■□□□ 1.48
RABGGTA-202ENST00000399409 RASA2Q15283 850 aa24.31■■□□□ 1.48
RABGGTA-202ENST00000399409 HSDL1Q3SXM5 330 aa24.31■■□□□ 1.48
RABGGTA-202ENST00000399409 PTPN20Q4JDL3 420 aa24.31■■□□□ 1.48
RABGGTA-202ENST00000399409 SPATA21Q7Z572 469 aa24.31■■□□□ 1.48
RABGGTA-202ENST00000399409 PARP9Q8IXQ6 854 aa24.31■■□□□ 1.48
RABGGTA-202ENST00000399409 TGS1Q96RS0 853 aaKnown RBP24.31■■□□□ 1.48
RABGGTA-202ENST00000399409 SMARCAD1Q9H4L7 1026 aa24.31■■□□□ 1.48
RABGGTA-202ENST00000399409 AGTPBP1Q9UPW5 1226 aa24.31■■□□□ 1.48
RABGGTA-202ENST00000399409 A0A0G2JLL6 359 aaPredicted RBP24.3■■□□□ 1.48
RABGGTA-202ENST00000399409 CFAP73A6NFT4 308 aa24.3■■□□□ 1.48
RABGGTA-202ENST00000399409 FAM47DPA6NHR8 397 aa24.3■■□□□ 1.48
RABGGTA-202ENST00000399409 INO80B-WBP1J3KQ70 363 aa24.3■■□□□ 1.48
RABGGTA-202ENST00000399409 SGK1O00141 431 aa24.3■■□□□ 1.48
RABGGTA-202ENST00000399409 CHUKO15111 745 aa24.3■■□□□ 1.48
RABGGTA-202ENST00000399409 ETS1P14921 441 aa24.3■■□□□ 1.48
RABGGTA-202ENST00000399409 RFC1P35251 1148 aaPredicted RBP24.3■■□□□ 1.48
RABGGTA-202ENST00000399409 SLC25A11Q02978 314 aaKnown RBP24.3■■□□□ 1.48
RABGGTA-202ENST00000399409 PRRT2Q7Z6L0 340 aaPredicted RBP24.3■■□□□ 1.48
RABGGTA-202ENST00000399409 TRIM50Q86XT4 487 aa24.3■■□□□ 1.48
RABGGTA-202ENST00000399409 DHX37Q8IY37 1157 aaKnown RBP24.3■■□□□ 1.48
RABGGTA-202ENST00000399409 GDAP1Q8TB36 358 aa24.3■■□□□ 1.48
RABGGTA-202ENST00000399409 INO80BQ9C086 356 aaPredicted RBP24.3■■□□□ 1.48
RABGGTA-202ENST00000399409 NXF1Q9UBU9 619 aaKnown RBP24.3■■□□□ 1.48
RABGGTA-202ENST00000399409 POLIQ9UNA4 740 aa24.3■■□□□ 1.48
RABGGTA-202ENST00000399409 HBP1O60381 514 aa24.3■■□□□ 1.48
RABGGTA-202ENST00000399409 CNMDO75829 334 aa24.3■■□□□ 1.48
RABGGTA-202ENST00000399409 ZNF268Q14587 947 aaPredicted RBP24.3■■□□□ 1.48
RABGGTA-202ENST00000399409 TAZQ16635 292 aa24.3■■□□□ 1.48
RABGGTA-202ENST00000399409 WDR72Q3MJ13 1102 aa24.3■■□□□ 1.48
RABGGTA-202ENST00000399409 BBS12Q6ZW61 710 aa24.3■■□□□ 1.48
RABGGTA-202ENST00000399409 TRABD2AQ86V40 505 aa24.3■■□□□ 1.48
RABGGTA-202ENST00000399409 SPATA33Q96N06 139 aa24.3■■□□□ 1.48
RABGGTA-202ENST00000399409 FOXO6A8MYZ6 492 aa24.29■■□□□ 1.48
RABGGTA-202ENST00000399409 GOLGA8SH3BPF8 625 aa24.29■■□□□ 1.48
RABGGTA-202ENST00000399409 PSMC1P62191 440 aaKnown RBP24.29■■□□□ 1.48
RABGGTA-202ENST00000399409 SNCBQ16143 134 aa24.29■■□□□ 1.48
RABGGTA-202ENST00000399409 TMEM63BQ5T3F8 832 aa24.29■■□□□ 1.48
RABGGTA-202ENST00000399409 PRCCQ92733 491 aaPredicted RBP24.29■■□□□ 1.48
RABGGTA-202ENST00000399409 NLRP4Q96MN2 994 aa24.29■■□□□ 1.48
RABGGTA-202ENST00000399409 CDT1Q9H211 546 aa24.29■■□□□ 1.48
RABGGTA-202ENST00000399409 SLC24A2Q9UI40 661 aa24.29■■□□□ 1.48
RABGGTA-202ENST00000399409 DYNC1LI1Q9Y6G9 523 aaKnown RBP24.29■■□□□ 1.48
RABGGTA-202ENST00000399409 GH1P01241 217 aa24.28■■□□□ 1.48
RABGGTA-202ENST00000399409 GCAP28676 217 aa24.28■■□□□ 1.48
RABGGTA-202ENST00000399409 MBTD1Q05BQ5 628 aa24.28■■□□□ 1.48
RABGGTA-202ENST00000399409 EEF1DP3Q658K8 133 aa24.28■■□□□ 1.48
RABGGTA-202ENST00000399409 CNKSR2Q8WXI2 1034 aa24.28■■□□□ 1.48
RABGGTA-202ENST00000399409 ACSF2Q96CM8 615 aaPredicted RBP24.28■■□□□ 1.48
RABGGTA-202ENST00000399409 HAUS1Q96CS2 278 aa24.28■■□□□ 1.48
RABGGTA-202ENST00000399409 FGD4Q96M96 766 aa24.28■■□□□ 1.48
RABGGTA-202ENST00000399409 NFKBIZQ9BYH8 718 aa24.28■■□□□ 1.48
RABGGTA-202ENST00000399409 ASCC2Q9H1I8 757 aaPredicted RBP24.28■■□□□ 1.48
RABGGTA-202ENST00000399409 MLXIPLQ9NP71 852 aa24.28■■□□□ 1.48
RABGGTA-202ENST00000399409 SMG5Q9UPR3 1016 aaKnown RBP24.28■■□□□ 1.48
RABGGTA-202ENST00000399409 PRPF4O43172 522 aaKnown RBP eCLIP24.28■■□□□ 1.482e-6■□□□□ 10
RABGGTA-202ENST00000399409 LRCH4O75427 683 aa24.28■■□□□ 1.48
RABGGTA-202ENST00000399409 RAD23BP54727 409 aa24.28■■□□□ 1.48
RABGGTA-202ENST00000399409 ACAP1Q15027 740 aa24.28■■□□□ 1.48
RABGGTA-202ENST00000399409 CCDC63Q8NA47 563 aa24.28■■□□□ 1.48
RABGGTA-202ENST00000399409 TMEM121Q9BTD3 319 aa24.28■■□□□ 1.48
RABGGTA-202ENST00000399409 VPS37BQ9H9H4 285 aa24.28■■□□□ 1.48
RABGGTA-202ENST00000399409 ABCF3Q9NUQ8 709 aa24.28■■□□□ 1.48
RABGGTA-202ENST00000399409 PRMT7Q9NVM4 692 aaPredicted RBP24.28■■□□□ 1.48
RABGGTA-202ENST00000399409 SMAPO00193 183 aa24.27■■□□□ 1.48
RABGGTA-202ENST00000399409 KRT19P08727 400 aa24.27■■□□□ 1.48
RABGGTA-202ENST00000399409 OSTNP61366 133 aa24.27■■□□□ 1.48
RABGGTA-202ENST00000399409 EFCAB12Q6NXP0 572 aa24.27■■□□□ 1.48
RABGGTA-202ENST00000399409 JOSD2Q8TAC2 188 aa24.27■■□□□ 1.48
RABGGTA-202ENST00000399409 MAGEC3Q8TD91 643 aa24.27■■□□□ 1.48
RABGGTA-202ENST00000399409 PRKAG3Q9UGI9 489 aa24.27■■□□□ 1.48
RABGGTA-202ENST00000399409 FARP1Q9Y4F1 1045 aaPredicted RBP24.27■■□□□ 1.48
RABGGTA-202ENST00000399409 PAPPA2Q9BXP8 1791 aa24.27■■□□□ 1.48
RABGGTA-202ENST00000399409 B4GALT5O43286 388 aa24.27■■□□□ 1.48
RABGGTA-202ENST00000399409 KDELR1P24390 212 aa24.27■■□□□ 1.48
RABGGTA-202ENST00000399409 ATICP31939 592 aa24.27■■□□□ 1.48
RABGGTA-202ENST00000399409 TNFAIP2Q03169 654 aa24.27■■□□□ 1.48
RABGGTA-202ENST00000399409 POU5F1BQ06416 359 aa24.27■■□□□ 1.48
RABGGTA-202ENST00000399409 CCDC62Q6P9F0 684 aa24.27■■□□□ 1.48
RABGGTA-202ENST00000399409 XYLT1Q86Y38 959 aa24.27■■□□□ 1.48
RABGGTA-202ENST00000399409 PPIL6Q8IXY8 311 aa24.27■■□□□ 1.48
RABGGTA-202ENST00000399409 SYNCQ9H7C4 482 aa24.27■■□□□ 1.48
RABGGTA-202ENST00000399409 ZWILCHQ9H900 591 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms