RNA–Protein interactions for RNA: ENST00000399349.5

ITSN1-208, Transcript of intersectin 1, human

TSL 1 (best) BASIC

Gene ITSN1, Length 5,191 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITSN1-208	ENST00000399349	NAIF1	Q69YI7	327 aa	Predicted RBP	13.72	□□□□□ -0.21
ITSN1-208	ENST00000399349	PPIL6	Q8IXY8	311 aa		13.72	□□□□□ -0.21
ITSN1-208	ENST00000399349	PRMT6	Q96LA8	375 aa	Predicted RBP	13.72	□□□□□ -0.21
ITSN1-208	ENST00000399349	ZNF229	Q9UJW7	825 aa		13.72	□□□□□ -0.21
ITSN1-208	ENST00000399349	PNMA8B	Q9ULN7	279 aa	Predicted RBP	13.72	□□□□□ -0.21
ITSN1-208	ENST00000399349	BAZ2B	Q9UIF8	2168 aa	Known RBP	13.72	□□□□□ -0.21
ITSN1-208	ENST00000399349	PRRG1	O14668	218 aa		13.72	□□□□□ -0.21
ITSN1-208	ENST00000399349	SYTL3	Q4VX76	610 aa		13.72	□□□□□ -0.21
ITSN1-208	ENST00000399349	PAN2	Q504Q3	1202 aa	Known RBP	13.72	□□□□□ -0.21
ITSN1-208	ENST00000399349	PTRHD1	Q6GMV3	140 aa	Known RBP	13.72	□□□□□ -0.21
ITSN1-208	ENST00000399349	TTI2	Q6NXR4	508 aa		13.72	□□□□□ -0.21
ITSN1-208	ENST00000399349	TMEM154	Q6P9G4	183 aa		13.72	□□□□□ -0.21
ITSN1-208	ENST00000399349	WNK4	Q96J92	1243 aa		13.72	□□□□□ -0.21
ITSN1-208	ENST00000399349	APOL2	Q9BQE5	337 aa		13.72	□□□□□ -0.21
ITSN1-208	ENST00000399349	ROPN1B	Q9BZX4	212 aa	Predicted RBP	13.72	□□□□□ -0.21
ITSN1-208	ENST00000399349	ASCC2	Q9H1I8	757 aa	Predicted RBP	13.72	□□□□□ -0.21
ITSN1-208	ENST00000399349	ROPN1	Q9HAT0	212 aa	Predicted RBP	13.72	□□□□□ -0.21
ITSN1-208	ENST00000399349	RPS6KL1	Q9Y6S9	549 aa		13.72	□□□□□ -0.21
ITSN1-208	ENST00000399349	FAM205A	Q6ZU69	1335 aa		13.72	□□□□□ -0.21
ITSN1-208	ENST00000399349	SPDYE5	A6NIY4	337 aa		13.72	□□□□□ -0.21
ITSN1-208	ENST00000399349	CYBB	P04839	570 aa		13.72	□□□□□ -0.21
ITSN1-208	ENST00000399349	R3HDM1	Q15032	1099 aa	Known RBP	13.72	□□□□□ -0.21
ITSN1-208	ENST00000399349	SPDYE7P	Q495Y7	208 aa		13.72	□□□□□ -0.21
ITSN1-208	ENST00000399349	BTNL9	Q6UXG8	535 aa		13.72	□□□□□ -0.21
ITSN1-208	ENST00000399349	ABI2	Q9NYB9	513 aa	Predicted RBP	13.72	□□□□□ -0.21
ITSN1-208	ENST00000399349		M0QYT0	321 aa		13.71	□□□□□ -0.21
ITSN1-208	ENST00000399349	C2CD2L	O14523	706 aa		13.71	□□□□□ -0.21
ITSN1-208	ENST00000399349	XPO1	O14980	1071 aa	Known RBP	13.71	□□□□□ -0.21
ITSN1-208	ENST00000399349	CD4	P01730	458 aa		13.71	□□□□□ -0.21
ITSN1-208	ENST00000399349	HNRNPC	P07910	306 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
ITSN1-208	ENST00000399349	RRM1	P23921	792 aa		13.71	□□□□□ -0.21
ITSN1-208	ENST00000399349	PPP3CC	P48454	512 aa		13.71	□□□□□ -0.21
ITSN1-208	ENST00000399349	HDAC4	P56524	1084 aa		13.71	□□□□□ -0.21
ITSN1-208	ENST00000399349	ABCE1	P61221	599 aa	Known RBP	13.71	□□□□□ -0.21
ITSN1-208	ENST00000399349	ACOT1	Q86TX2	421 aa		13.71	□□□□□ -0.21
ITSN1-208	ENST00000399349	HS6ST3	Q8IZP7	471 aa		13.71	□□□□□ -0.21
ITSN1-208	ENST00000399349	DNAJC9	Q8WXX5	260 aa		13.71	□□□□□ -0.21
ITSN1-208	ENST00000399349	PABPC3	Q9H361	631 aa	Known RBP	13.71	□□□□□ -0.21
ITSN1-208	ENST00000399349	DDX28	Q9NUL7	540 aa	Known RBP	13.71	□□□□□ -0.21
ITSN1-208	ENST00000399349	YY1	P25490	414 aa		13.71	□□□□□ -0.21
ITSN1-208	ENST00000399349	AVPR1A	P37288	418 aa		13.71	□□□□□ -0.21
ITSN1-208	ENST00000399349	GEMIN4	P57678	1058 aa	Known RBP	13.71	□□□□□ -0.21
ITSN1-208	ENST00000399349	KCTD10	Q9H3F6	313 aa		13.71	□□□□□ -0.21
ITSN1-208	ENST00000399349	ANKEF1	Q9NU02	776 aa		13.71	□□□□□ -0.21
ITSN1-208	ENST00000399349	PKD2L2	Q9NZM6	624 aa		13.71	□□□□□ -0.21
ITSN1-208	ENST00000399349	KDM6A	O15550	1401 aa	Predicted RBP	13.71	□□□□□ -0.21
ITSN1-208	ENST00000399349	ATP6V1B1	P15313	513 aa		13.71	□□□□□ -0.21
ITSN1-208	ENST00000399349	SOX10	P56693	466 aa		13.71	□□□□□ -0.21
ITSN1-208	ENST00000399349	ZRANB3	Q5FWF4	1079 aa		13.71	□□□□□ -0.21
ITSN1-208	ENST00000399349	ZNF467	Q7Z7K2	595 aa	Predicted RBP	13.71	□□□□□ -0.21
ITSN1-208	ENST00000399349	EMC1	Q8N766	993 aa		13.71	□□□□□ -0.21
ITSN1-208	ENST00000399349	TSPAN17	Q96FV3	270 aa		13.71	□□□□□ -0.21
ITSN1-208	ENST00000399349	NEUROG2	Q9H2A3	272 aa		13.71	□□□□□ -0.21
ITSN1-208	ENST00000399349	GPBP1L1	Q9HC44	474 aa	Predicted RBP	13.71	□□□□□ -0.21
ITSN1-208	ENST00000399349	CDYL	Q9Y232	598 aa		13.71	□□□□□ -0.21
ITSN1-208	ENST00000399349	TULP2	O00295	520 aa		13.71	□□□□□ -0.22
ITSN1-208	ENST00000399349	HBP1	O60381	514 aa		13.71	□□□□□ -0.22
ITSN1-208	ENST00000399349	AKAP3	O75969	853 aa		13.71	□□□□□ -0.22
ITSN1-208	ENST00000399349	IL18RAP	O95256	599 aa		13.71	□□□□□ -0.22
ITSN1-208	ENST00000399349	HOXD10	P28358	340 aa		13.71	□□□□□ -0.22
ITSN1-208	ENST00000399349	KRT72	Q14CN4	511 aa		13.71	□□□□□ -0.22
ITSN1-208	ENST00000399349	TKFC	Q3LXA3	575 aa		13.71	□□□□□ -0.22
ITSN1-208	ENST00000399349	TTC39B	Q5VTQ0	682 aa	Predicted RBP	13.71	□□□□□ -0.22
ITSN1-208	ENST00000399349	DENND5B	Q6ZUT9	1274 aa		13.71	□□□□□ -0.22
ITSN1-208	ENST00000399349	LRRC6	Q86X45	466 aa		13.71	□□□□□ -0.22
ITSN1-208	ENST00000399349	B4GALNT2	Q8NHY0	566 aa		13.71	□□□□□ -0.22
ITSN1-208	ENST00000399349	TAS1R2	Q8TE23	839 aa		13.71	□□□□□ -0.22
ITSN1-208	ENST00000399349	SYN2	Q92777	582 aa	Predicted RBP	13.71	□□□□□ -0.22
ITSN1-208	ENST00000399349	KAT2B	Q92831	832 aa		13.71	□□□□□ -0.22
ITSN1-208	ENST00000399349	CMTM5	Q96DZ9	223 aa		13.71	□□□□□ -0.22
ITSN1-208	ENST00000399349	DNAJC7	Q99615	494 aa		13.71	□□□□□ -0.22
ITSN1-208	ENST00000399349	MTO1	Q9Y2Z2	717 aa	Known RBP	13.71	□□□□□ -0.22
ITSN1-208	ENST00000399349	OCM2	P0CE71	109 aa		13.7	□□□□□ -0.22
ITSN1-208	ENST00000399349	OCM	P0CE72	109 aa	Predicted RBP	13.7	□□□□□ -0.22
ITSN1-208	ENST00000399349	PCSK1	P29120	753 aa		13.7	□□□□□ -0.22
ITSN1-208	ENST00000399349	GLRB	P48167	497 aa		13.7	□□□□□ -0.22
ITSN1-208	ENST00000399349	SKIV2L	Q15477	1246 aa	Known RBP	13.7	□□□□□ -0.22
ITSN1-208	ENST00000399349	GLB1L	Q6UWU2	654 aa		13.7	□□□□□ -0.22
ITSN1-208	ENST00000399349	MIB1	Q86YT6	1006 aa		13.7	□□□□□ -0.22
ITSN1-208	ENST00000399349	SLC20A1	Q8WUM9	679 aa		13.7	□□□□□ -0.22
ITSN1-208	ENST00000399349	BATF3	Q9NR55	127 aa		13.7	□□□□□ -0.22
ITSN1-208	ENST00000399349	P4HA2	O15460	535 aa		13.7	□□□□□ -0.22
ITSN1-208	ENST00000399349	PCYT1A	P49585	367 aa		13.7	□□□□□ -0.22
ITSN1-208	ENST00000399349	ZNF157	P51786	506 aa	Predicted RBP	13.7	□□□□□ -0.22
ITSN1-208	ENST00000399349	CENPC	Q03188	943 aa		13.7	□□□□□ -0.22
ITSN1-208	ENST00000399349	TRADD	Q15628	312 aa		13.7	□□□□□ -0.22
ITSN1-208	ENST00000399349	C10orf120	Q5SQS8	335 aa		13.7	□□□□□ -0.22
ITSN1-208	ENST00000399349	ADGRA1	Q86SQ6	560 aa		13.7	□□□□□ -0.22
ITSN1-208	ENST00000399349	ATP8B4	Q8TF62	1192 aa		13.7	□□□□□ -0.22
ITSN1-208	ENST00000399349	GPR63	Q9BZJ6	419 aa		13.7	□□□□□ -0.22
ITSN1-208	ENST00000399349	ARHGAP20	Q9P2F6	1191 aa		13.7	□□□□□ -0.22
ITSN1-208	ENST00000399349	HPSE	Q9Y251	543 aa		13.7	□□□□□ -0.22
ITSN1-208	ENST00000399349	RNF17	Q9BXT8	1623 aa	Known RBP	13.7	□□□□□ -0.22
ITSN1-208	ENST00000399349	IQCA1L	A6NCM1	817 aa		13.7	□□□□□ -0.22
ITSN1-208	ENST00000399349	KLHL2	O95198	593 aa		13.7	□□□□□ -0.22
ITSN1-208	ENST00000399349	PGK2	P07205	417 aa		13.7	□□□□□ -0.22
ITSN1-208	ENST00000399349	FAM200B	P0CF97	657 aa		13.7	□□□□□ -0.22
ITSN1-208	ENST00000399349	CYP11B1	P15538	503 aa		13.7	□□□□□ -0.22
ITSN1-208	ENST00000399349	SNAPC2	Q13487	334 aa		13.7	□□□□□ -0.22
ITSN1-208	ENST00000399349	PATL1	Q86TB9	770 aa	Known RBP	13.7	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms