RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 HEMGNQ9BXL5 484 aa18.69■□□□□ 0.58
HLA-DQB1-204ENST00000399084 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.69■□□□□ 0.58
HLA-DQB1-204ENST00000399084 EVPLQ92817 2033 aa18.69■□□□□ 0.58
HLA-DQB1-204ENST00000399084 TP73O15350 636 aa18.69■□□□□ 0.58
HLA-DQB1-204ENST00000399084 ITGAVP06756 1048 aa18.69■□□□□ 0.58
HLA-DQB1-204ENST00000399084 MMP3P08254 477 aa18.69■□□□□ 0.58
HLA-DQB1-204ENST00000399084 KLRC2P26717 231 aa18.69■□□□□ 0.58
HLA-DQB1-204ENST00000399084 AXLP30530 894 aa18.69■□□□□ 0.58
HLA-DQB1-204ENST00000399084 MMP13P45452 471 aa18.69■□□□□ 0.58
HLA-DQB1-204ENST00000399084 ITGA8P53708 1063 aa18.69■□□□□ 0.58
HLA-DQB1-204ENST00000399084 ZNF252P-AS1Q0IIN9 211 aa18.69■□□□□ 0.58
HLA-DQB1-204ENST00000399084 TMEM63BQ5T3F8 832 aa18.69■□□□□ 0.58
HLA-DQB1-204ENST00000399084 KIAA0319LQ8IZA0 1049 aa18.69■□□□□ 0.58
HLA-DQB1-204ENST00000399084 BRI3BPQ8WY22 251 aa18.69■□□□□ 0.58
HLA-DQB1-204ENST00000399084 MCRS1Q96EZ8 462 aa18.69■□□□□ 0.58
HLA-DQB1-204ENST00000399084 GCOM2Q9BZD3 368 aaPredicted RBP18.69■□□□□ 0.58
HLA-DQB1-204ENST00000399084 PHACTR1Q9C0D0 580 aa18.69■□□□□ 0.58
HLA-DQB1-204ENST00000399084 PPCSQ9HAB8 311 aa18.69■□□□□ 0.58
HLA-DQB1-204ENST00000399084 DPP3Q9NY33 737 aa18.69■□□□□ 0.58
HLA-DQB1-204ENST00000399084 POLIQ9UNA4 740 aa18.69■□□□□ 0.58
HLA-DQB1-204ENST00000399084 RRP15Q9Y3B9 282 aaKnown RBP18.69■□□□□ 0.58
HLA-DQB1-204ENST00000399084 hCG_1818297A0A087WSY0 165 aa18.68■□□□□ 0.58
HLA-DQB1-204ENST00000399084 F8VP50 259 aa18.68■□□□□ 0.58
HLA-DQB1-204ENST00000399084 TULP2O00295 520 aa18.68■□□□□ 0.58
HLA-DQB1-204ENST00000399084 TRAPPC3O43617 180 aa18.68■□□□□ 0.58
HLA-DQB1-204ENST00000399084 CAND2O75155 1236 aa18.68■□□□□ 0.58
HLA-DQB1-204ENST00000399084 PSMA2P25787 234 aa18.68■□□□□ 0.58
HLA-DQB1-204ENST00000399084 PCK1P35558 622 aa18.68■□□□□ 0.58
HLA-DQB1-204ENST00000399084 PSMC1P62191 440 aaKnown RBP18.68■□□□□ 0.58
HLA-DQB1-204ENST00000399084 TAZQ16635 292 aa18.68■□□□□ 0.58
HLA-DQB1-204ENST00000399084 PTPN20Q4JDL3 420 aa18.68■□□□□ 0.58
HLA-DQB1-204ENST00000399084 ZFYVE27Q5T4F4 411 aa18.68■□□□□ 0.58
HLA-DQB1-204ENST00000399084 SCARA5Q6ZMJ2 495 aa18.68■□□□□ 0.58
HLA-DQB1-204ENST00000399084 GSTA5Q7RTV2 222 aa18.68■□□□□ 0.58
HLA-DQB1-204ENST00000399084 PCGF5Q86SE9 256 aa18.68■□□□□ 0.58
HLA-DQB1-204ENST00000399084 ATG4AQ8WYN0 398 aa18.68■□□□□ 0.58
HLA-DQB1-204ENST00000399084 SYNCQ9H7C4 482 aa18.68■□□□□ 0.58
HLA-DQB1-204ENST00000399084 R3HDM2Q9Y2K5 976 aaKnown RBP18.68■□□□□ 0.58
HLA-DQB1-204ENST00000399084 NRCAMQ92823 1304 aa18.68■□□□□ 0.58
HLA-DQB1-204ENST00000399084 RNF8O76064 485 aa18.67■□□□□ 0.58
HLA-DQB1-204ENST00000399084 ABHD2P08910 425 aa18.67■□□□□ 0.58
HLA-DQB1-204ENST00000399084 SETSIPP0DME0 302 aa18.67■□□□□ 0.58
HLA-DQB1-204ENST00000399084 CDKN2BP42772 138 aa18.67■□□□□ 0.58
HLA-DQB1-204ENST00000399084 CCT5P48643 541 aa18.67■□□□□ 0.58
HLA-DQB1-204ENST00000399084 SCARA3Q6AZY7 606 aa18.67■□□□□ 0.58
HLA-DQB1-204ENST00000399084 LCLAT1Q6UWP7 414 aa18.67■□□□□ 0.58
HLA-DQB1-204ENST00000399084 MFSD7Q6UXD7 560 aa18.67■□□□□ 0.58
HLA-DQB1-204ENST00000399084 YTHDF3Q7Z739 585 aaKnown RBP18.67■□□□□ 0.58
HLA-DQB1-204ENST00000399084 NLRP14Q86W24 1093 aa18.67■□□□□ 0.58
HLA-DQB1-204ENST00000399084 TMEM192Q8IY95 271 aa18.67■□□□□ 0.58
HLA-DQB1-204ENST00000399084 C2orf69Q8N8R5 385 aa18.67■□□□□ 0.58
HLA-DQB1-204ENST00000399084 OR6J1Q8NGC5 347 aa18.67■□□□□ 0.58
HLA-DQB1-204ENST00000399084 TTC25Q96NG3 672 aa18.67■□□□□ 0.58
HLA-DQB1-204ENST00000399084 CCT8L2Q96SF2 557 aa18.67■□□□□ 0.58
HLA-DQB1-204ENST00000399084 HERPUD2Q9BSE4 406 aa18.67■□□□□ 0.58
HLA-DQB1-204ENST00000399084 CDC42EP4Q9H3Q1 356 aaKnown RBP18.67■□□□□ 0.58
HLA-DQB1-204ENST00000399084 ASNSD1Q9NWL6 643 aa18.67■□□□□ 0.58
HLA-DQB1-204ENST00000399084 CLEC11AQ9Y240 323 aa18.67■□□□□ 0.58
HLA-DQB1-204ENST00000399084 ZNF236Q9UL36 1845 aa18.67■□□□□ 0.58
HLA-DQB1-204ENST00000399084 A6NJR5 290 aa18.66■□□□□ 0.58
HLA-DQB1-204ENST00000399084 O00370 1275 aa18.66■□□□□ 0.58
HLA-DQB1-204ENST00000399084 VTNP04004 478 aa18.66■□□□□ 0.58
HLA-DQB1-204ENST00000399084 SHBGP04278 402 aa18.66■□□□□ 0.58
HLA-DQB1-204ENST00000399084 SMPD1P17405 629 aa18.66■□□□□ 0.58
HLA-DQB1-204ENST00000399084 RFC1P35251 1148 aaPredicted RBP18.66■□□□□ 0.58
HLA-DQB1-204ENST00000399084 VCPP55072 806 aaKnown RBP18.66■□□□□ 0.58
HLA-DQB1-204ENST00000399084 STAT4Q14765 748 aa18.66■□□□□ 0.58
HLA-DQB1-204ENST00000399084 MARCH8Q5T0T0 291 aa18.66■□□□□ 0.58
HLA-DQB1-204ENST00000399084 HIBCHQ6NVY1 386 aaPredicted RBP18.66■□□□□ 0.58
HLA-DQB1-204ENST00000399084 XYLT1Q86Y38 959 aa18.66■□□□□ 0.58
HLA-DQB1-204ENST00000399084 ZCCHC9Q8N567 271 aaKnown RBP18.66■□□□□ 0.58
HLA-DQB1-204ENST00000399084 ALLCQ8N6M5 410 aa18.66■□□□□ 0.58
HLA-DQB1-204ENST00000399084 LRRC52Q8N7C0 313 aa18.66■□□□□ 0.58
HLA-DQB1-204ENST00000399084 NT5C1AQ9BXI3 368 aa18.66■□□□□ 0.58
HLA-DQB1-204ENST00000399084 GBA2Q9HCG7 927 aaPredicted RBP18.66■□□□□ 0.58
HLA-DQB1-204ENST00000399084 AAASQ9NRG9 546 aa18.66■□□□□ 0.58
HLA-DQB1-204ENST00000399084 AGAP1Q9UPQ3 857 aa18.66■□□□□ 0.58
HLA-DQB1-204ENST00000399084 ZNF148Q9UQR1 794 aa18.66■□□□□ 0.58
HLA-DQB1-204ENST00000399084 SMIM35A0A1B0GVV1 85 aa18.66■□□□□ 0.58
HLA-DQB1-204ENST00000399084 DESP17661 470 aa18.66■□□□□ 0.58
HLA-DQB1-204ENST00000399084 GPD2P43304 727 aa18.66■□□□□ 0.58
HLA-DQB1-204ENST00000399084 OGDHQ02218 1023 aa18.66■□□□□ 0.58
HLA-DQB1-204ENST00000399084 MORF4L2Q15014 288 aa18.66■□□□□ 0.58
HLA-DQB1-204ENST00000399084 SPRYD7Q5W111 196 aa18.66■□□□□ 0.58
HLA-DQB1-204ENST00000399084 SLC27A1Q6PCB7 646 aa18.66■□□□□ 0.58
HLA-DQB1-204ENST00000399084 CDR2LQ86X02 465 aaPredicted RBP18.66■□□□□ 0.58
HLA-DQB1-204ENST00000399084 RIBC1Q8N443 379 aaPredicted RBP18.66■□□□□ 0.58
HLA-DQB1-204ENST00000399084 CMASQ8NFW8 434 aaPredicted RBP18.66■□□□□ 0.58
HLA-DQB1-204ENST00000399084 MYCBPAPQ8TBZ2 947 aa18.66■□□□□ 0.58
HLA-DQB1-204ENST00000399084 ELOVL4Q9GZR5 314 aa18.66■□□□□ 0.58
HLA-DQB1-204ENST00000399084 SDCBP2Q9H190 292 aa18.66■□□□□ 0.58
HLA-DQB1-204ENST00000399084 LRRD1A4D1F6 860 aa18.65■□□□□ 0.58
HLA-DQB1-204ENST00000399084 MICAL2O94851 1124 aa18.65■□□□□ 0.58
HLA-DQB1-204ENST00000399084 ZNF286BP0CG31 522 aa18.65■□□□□ 0.58
HLA-DQB1-204ENST00000399084 ATF7P17544 494 aaPredicted RBP18.65■□□□□ 0.58
HLA-DQB1-204ENST00000399084 SSTR3P32745 418 aaPredicted RBP18.65■□□□□ 0.58
HLA-DQB1-204ENST00000399084 YARSP54577 528 aaKnown RBP18.65■□□□□ 0.58
HLA-DQB1-204ENST00000399084 CORO7P57737 925 aa18.65■□□□□ 0.58
HLA-DQB1-204ENST00000399084 OASLQ15646 514 aaKnown RBP18.65■□□□□ 0.58
HLA-DQB1-204ENST00000399084 IZUMO3Q5VZ72 239 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms