RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 TTC13Q8NBP0 860 aa15.27■□□□□ 0.03
RPRD1A-202ENST00000399022 KRT35Q92764 455 aa15.27■□□□□ 0.03
RPRD1A-202ENST00000399022 E2F7Q96AV8 911 aa15.27■□□□□ 0.03
RPRD1A-202ENST00000399022 KCNK16Q96T55 309 aa15.27■□□□□ 0.03
RPRD1A-202ENST00000399022 PFDN4Q9NQP4 134 aa15.27■□□□□ 0.03
RPRD1A-202ENST00000399022 TBX20Q9UMR3 447 aa15.27■□□□□ 0.03
RPRD1A-202ENST00000399022 AGAP1Q9UPQ3 857 aa15.27■□□□□ 0.03
RPRD1A-202ENST00000399022 AIM2O14862 343 aa15.26■□□□□ 0.03
RPRD1A-202ENST00000399022 CIITAP33076 1130 aa15.26■□□□□ 0.03
RPRD1A-202ENST00000399022 GMPSP49915 693 aaPredicted RBP15.26■□□□□ 0.03
RPRD1A-202ENST00000399022 GEMIN4P57678 1058 aaKnown RBP15.26■□□□□ 0.03
RPRD1A-202ENST00000399022 MCL1Q07820 350 aa15.26■□□□□ 0.03
RPRD1A-202ENST00000399022 DUPD1Q68J44 220 aa15.26■□□□□ 0.03
RPRD1A-202ENST00000399022 SPOPLQ6IQ16 392 aa15.26■□□□□ 0.03
RPRD1A-202ENST00000399022 ENOSF1Q7L5Y1 443 aa15.26■□□□□ 0.03
RPRD1A-202ENST00000399022 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.26■□□□□ 0.03
RPRD1A-202ENST00000399022 SLC5A5Q92911 643 aa15.26■□□□□ 0.03
RPRD1A-202ENST00000399022 PPP1R36Q96LQ0 422 aa15.26■□□□□ 0.03
RPRD1A-202ENST00000399022 OLFML3Q9NRN5 406 aa15.26■□□□□ 0.03
RPRD1A-202ENST00000399022 SP100P23497 879 aaPredicted RBP15.26■□□□□ 0.03
RPRD1A-202ENST00000399022 SLC1A1P43005 524 aa15.26■□□□□ 0.03
RPRD1A-202ENST00000399022 ADARP55265 1226 aaKnown RBP15.26■□□□□ 0.03
RPRD1A-202ENST00000399022 TRMT5Q32P41 509 aaKnown RBP15.26■□□□□ 0.03
RPRD1A-202ENST00000399022 WDR72Q3MJ13 1102 aa15.26■□□□□ 0.03
RPRD1A-202ENST00000399022 CATSPER1Q8NEC5 780 aa15.26■□□□□ 0.03
RPRD1A-202ENST00000399022 GALNT8Q9NY28 637 aa15.26■□□□□ 0.03
RPRD1A-202ENST00000399022 BTBD7Q9P203 1132 aa15.26■□□□□ 0.03
RPRD1A-202ENST00000399022 FESP07332 822 aa15.26■□□□□ 0.03
RPRD1A-202ENST00000399022 ENO3P13929 434 aaPredicted RBP15.26■□□□□ 0.03
RPRD1A-202ENST00000399022 CHI3L2Q15782 390 aa15.26■□□□□ 0.03
RPRD1A-202ENST00000399022 SLC15A2Q16348 729 aa15.26■□□□□ 0.03
RPRD1A-202ENST00000399022 PKN2Q16513 984 aaKnown RBP15.26■□□□□ 0.03
RPRD1A-202ENST00000399022 C6orf89Q6UWU4 347 aa15.26■□□□□ 0.03
RPRD1A-202ENST00000399022 TAS1R2Q8TE23 839 aa15.26■□□□□ 0.03
RPRD1A-202ENST00000399022 ARHGEF26Q96DR7 871 aa15.26■□□□□ 0.03
RPRD1A-202ENST00000399022 FAM96AQ9H5X1 160 aa15.26■□□□□ 0.03
RPRD1A-202ENST00000399022 TMEM8AQ9HCN3 771 aa15.26■□□□□ 0.03
RPRD1A-202ENST00000399022 NINJ2Q9NZG7 142 aa15.26■□□□□ 0.03
RPRD1A-202ENST00000399022 FBXO40Q9UH90 709 aa15.26■□□□□ 0.03
RPRD1A-202ENST00000399022 TTC36A6NLP5 189 aa15.25■□□□□ 0.03
RPRD1A-202ENST00000399022 FCHO1O14526 889 aa15.25■□□□□ 0.03
RPRD1A-202ENST00000399022 TBXAS1P24557 533 aaPredicted RBP15.25■□□□□ 0.03
RPRD1A-202ENST00000399022 NPTX2P47972 431 aa15.25■□□□□ 0.03
RPRD1A-202ENST00000399022 IREB2P48200 963 aaKnown RBP15.25■□□□□ 0.03
RPRD1A-202ENST00000399022 GPC3P51654 580 aa15.25■□□□□ 0.03
RPRD1A-202ENST00000399022 NCOA4Q13772 614 aa15.25■□□□□ 0.03
RPRD1A-202ENST00000399022 EMC2Q15006 297 aa15.25■□□□□ 0.03
RPRD1A-202ENST00000399022 C15orf52Q6ZUT6 534 aaKnown RBP15.25■□□□□ 0.03
RPRD1A-202ENST00000399022 OR6B3Q8NGW1 331 aa15.25■□□□□ 0.03
RPRD1A-202ENST00000399022 IDI2Q9BXS1 227 aa15.25■□□□□ 0.03
RPRD1A-202ENST00000399022 MRPL4Q9BYD3 311 aaKnown RBP15.25■□□□□ 0.03
RPRD1A-202ENST00000399022 TLK1Q9UKI8 766 aa15.25■□□□□ 0.03
RPRD1A-202ENST00000399022 KDM3BQ7LBC6 1761 aa15.25■□□□□ 0.03
RPRD1A-202ENST00000399022 CHRM1P11229 460 aaPredicted RBP15.25■□□□□ 0.03
RPRD1A-202ENST00000399022 ZNF200P98182 395 aaPredicted RBP15.25■□□□□ 0.03
RPRD1A-202ENST00000399022 DUOXA2Q1HG44 320 aa15.25■□□□□ 0.03
RPRD1A-202ENST00000399022 MYLK4Q86YV6 388 aaPredicted RBP15.25■□□□□ 0.03
RPRD1A-202ENST00000399022 LRRC71Q8N4P6 559 aa15.25■□□□□ 0.03
RPRD1A-202ENST00000399022 MCUQ8NE86 351 aa15.25■□□□□ 0.03
RPRD1A-202ENST00000399022 KCNMB3Q9NPA1 279 aa15.25■□□□□ 0.03
RPRD1A-202ENST00000399022 SPDYE5A6NIY4 337 aa15.25■□□□□ 0.03
RPRD1A-202ENST00000399022 F5H423 210 aaPredicted RBP15.25■□□□□ 0.03
RPRD1A-202ENST00000399022 CALB1P05937 261 aa15.25■□□□□ 0.03
RPRD1A-202ENST00000399022 TCN1P20061 433 aaPredicted RBP15.25■□□□□ 0.03
RPRD1A-202ENST00000399022 SURF1Q15526 300 aa15.25■□□□□ 0.03
RPRD1A-202ENST00000399022 KCTD21Q4G0X4 260 aa15.25■□□□□ 0.03
RPRD1A-202ENST00000399022 CBWD6Q4V339 395 aa15.25■□□□□ 0.03
RPRD1A-202ENST00000399022 CBWD3Q5JTY5 395 aa15.25■□□□□ 0.03
RPRD1A-202ENST00000399022 CBWD5Q5RIA9 395 aa15.25■□□□□ 0.03
RPRD1A-202ENST00000399022 RMDN2Q96LZ7 410 aa15.25■□□□□ 0.03
RPRD1A-202ENST00000399022 ASCC2Q9H1I8 757 aaPredicted RBP15.25■□□□□ 0.03
RPRD1A-202ENST00000399022 EBF2Q9HAK2 575 aa15.25■□□□□ 0.03
RPRD1A-202ENST00000399022 PCMTD2Q9NV79 361 aa15.25■□□□□ 0.03
RPRD1A-202ENST00000399022 ZNF212Q9UDV6 495 aa15.25■□□□□ 0.03
RPRD1A-202ENST00000399022 GH1P01241 217 aa15.25■□□□□ 0.03
RPRD1A-202ENST00000399022 OSBPP22059 807 aa15.25■□□□□ 0.03
RPRD1A-202ENST00000399022 PPIDQ08752 370 aaKnown RBP15.25■□□□□ 0.03
RPRD1A-202ENST00000399022 PPP1R15BQ5SWA1 713 aa15.25■□□□□ 0.03
RPRD1A-202ENST00000399022 DEFB132Q7Z7B7 95 aa15.25■□□□□ 0.03
RPRD1A-202ENST00000399022 SDCCAG3Q96C92 435 aa15.25■□□□□ 0.03
RPRD1A-202ENST00000399022 FAXDC2Q96IV6 333 aa15.25■□□□□ 0.03
RPRD1A-202ENST00000399022 SPATA33Q96N06 139 aa15.25■□□□□ 0.03
RPRD1A-202ENST00000399022 KLC2Q9H0B6 622 aa15.25■□□□□ 0.03
RPRD1A-202ENST00000399022 APPL1Q9UKG1 709 aa15.25■□□□□ 0.03
RPRD1A-202ENST00000399022 GTF3C4Q9UKN8 822 aa15.25■□□□□ 0.03
RPRD1A-202ENST00000399022 RTN3O95197 1032 aaPredicted RBP15.24■□□□□ 0.03
RPRD1A-202ENST00000399022 PGM3O95394 542 aa15.24■□□□□ 0.03
RPRD1A-202ENST00000399022 WEE2P0C1S8 567 aa15.24■□□□□ 0.03
RPRD1A-202ENST00000399022 FDX1P10109 184 aa15.24■□□□□ 0.03
RPRD1A-202ENST00000399022 CXCL9Q07325 125 aa15.24■□□□□ 0.03
RPRD1A-202ENST00000399022 USP4Q13107 963 aa15.24■□□□□ 0.03
RPRD1A-202ENST00000399022 PPP1R2P3Q6NXS1 205 aa15.24■□□□□ 0.03
RPRD1A-202ENST00000399022 SLC47A2Q86VL8 602 aa15.24■□□□□ 0.03
RPRD1A-202ENST00000399022 DNAAF3Q8N9W5 541 aa15.24■□□□□ 0.03
RPRD1A-202ENST00000399022 ZNF75CPQ92670 426 aaPredicted RBP15.24■□□□□ 0.03
RPRD1A-202ENST00000399022 ACSF2Q96CM8 615 aaPredicted RBP15.24■□□□□ 0.03
RPRD1A-202ENST00000399022 GLIS2Q9BZE0 524 aaPredicted RBP15.24■□□□□ 0.03
RPRD1A-202ENST00000399022 KLHL4Q9C0H6 718 aa15.24■□□□□ 0.03
RPRD1A-202ENST00000399022 PPCSQ9HAB8 311 aa15.24■□□□□ 0.03
RPRD1A-202ENST00000399022 C5orf60A6NFR6 353 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms