RNA–Protein interactions for RNA: ENST00000398427.6

PPME1-202, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best) BASIC

Gene PPME1, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-202ENST00000398427 F8VZ95 297 aa12.18□□□□□ -0.46
PPME1-202ENST00000398427 SYN3O14994 580 aa12.18□□□□□ -0.46
PPME1-202ENST00000398427 TYMPP19971 482 aa12.18□□□□□ -0.46
PPME1-202ENST00000398427 HNRNPH1P31943 449 aaKnown RBP12.18□□□□□ -0.46
PPME1-202ENST00000398427 CASP14P31944 242 aa12.18□□□□□ -0.46
PPME1-202ENST00000398427 MNAT1P51948 309 aa12.18□□□□□ -0.46
PPME1-202ENST00000398427 JAM2P57087 298 aa12.18□□□□□ -0.46
PPME1-202ENST00000398427 ERVK-21P61565 698 aa12.18□□□□□ -0.46
PPME1-202ENST00000398427 PLCB3Q01970 1234 aa12.18□□□□□ -0.46
PPME1-202ENST00000398427 INCA1Q0VD86 236 aa12.18□□□□□ -0.46
PPME1-202ENST00000398427 PRPF38BQ5VTL8 546 aaKnown RBP12.18□□□□□ -0.46
PPME1-202ENST00000398427 CACNA2D4Q7Z3S7 1137 aa12.18□□□□□ -0.46
PPME1-202ENST00000398427 DDX53Q86TM3 631 aaKnown RBP12.18□□□□□ -0.46
PPME1-202ENST00000398427 CEP57Q86XR8 500 aa12.18□□□□□ -0.46
PPME1-202ENST00000398427 CALR3Q96L12 384 aaKnown RBP12.18□□□□□ -0.46
PPME1-202ENST00000398427 FAM81BQ96LP2 452 aa12.18□□□□□ -0.46
PPME1-202ENST00000398427 STK33Q9BYT3 514 aa12.18□□□□□ -0.46
PPME1-202ENST00000398427 CERS4Q9HA82 394 aa12.18□□□□□ -0.46
PPME1-202ENST00000398427 GABRDO14764 452 aa12.17□□□□□ -0.46
PPME1-202ENST00000398427 SOD2P04179 222 aa12.17□□□□□ -0.46
PPME1-202ENST00000398427 WARSP23381 471 aaKnown RBP12.17□□□□□ -0.46
PPME1-202ENST00000398427 CALRP27797 417 aaKnown RBP12.17□□□□□ -0.46
PPME1-202ENST00000398427 LRIT3Q3SXY7 679 aa12.17□□□□□ -0.46
PPME1-202ENST00000398427 TMEM86AQ8N2M4 240 aa12.17□□□□□ -0.46
PPME1-202ENST00000398427 MICALL1Q8N3F8 863 aa12.17□□□□□ -0.46
PPME1-202ENST00000398427 WHAMMQ8TF30 809 aa12.17□□□□□ -0.46
PPME1-202ENST00000398427 JAKMIP2Q96AA8 810 aa12.17□□□□□ -0.46
PPME1-202ENST00000398427 SAMD11Q96NU1 681 aa12.17□□□□□ -0.46
PPME1-202ENST00000398427 TWNKQ96RR1 684 aa12.17□□□□□ -0.46
PPME1-202ENST00000398427 RTP3Q9BQQ7 232 aa12.17□□□□□ -0.46
PPME1-202ENST00000398427 EPC1Q9H2F5 836 aa12.17□□□□□ -0.46
PPME1-202ENST00000398427 SLC28A3Q9HAS3 691 aa12.17□□□□□ -0.46
PPME1-202ENST00000398427 ALG13Q9NP73 1137 aaKnown RBP12.17□□□□□ -0.46
PPME1-202ENST00000398427 CHST7Q9NS84 486 aa12.17□□□□□ -0.46
PPME1-202ENST00000398427 CAPN11Q9UMQ6 739 aa12.17□□□□□ -0.46
PPME1-202ENST00000398427 DAAM1Q9Y4D1 1078 aa12.17□□□□□ -0.46
PPME1-202ENST00000398427 FOXN3O00409 490 aaPredicted RBP12.17□□□□□ -0.46
PPME1-202ENST00000398427 MAP2K7O14733 419 aa12.17□□□□□ -0.46
PPME1-202ENST00000398427 CILPO75339 1184 aa12.17□□□□□ -0.46
PPME1-202ENST00000398427 LMO2P25791 158 aa12.17□□□□□ -0.46
PPME1-202ENST00000398427 NDST1P52848 882 aa12.17□□□□□ -0.46
PPME1-202ENST00000398427 KRT17Q04695 432 aa12.17□□□□□ -0.46
PPME1-202ENST00000398427 YWHAHQ04917 246 aaPredicted RBP12.17□□□□□ -0.46
PPME1-202ENST00000398427 GOLGA8FQ08AF8 430 aa12.17□□□□□ -0.46
PPME1-202ENST00000398427 GOLGA8DPQ0D2H9 430 aa12.17□□□□□ -0.46
PPME1-202ENST00000398427 ORC1Q13415 861 aa12.17□□□□□ -0.46
PPME1-202ENST00000398427 TRIM14Q14142 442 aa12.17□□□□□ -0.46
PPME1-202ENST00000398427 USP41Q3LFD5 358 aa12.17□□□□□ -0.46
PPME1-202ENST00000398427 VARS2Q5ST30 1063 aaKnown RBP12.17□□□□□ -0.46
PPME1-202ENST00000398427 OVOS1Q6IE37 1185 aa12.17□□□□□ -0.46
PPME1-202ENST00000398427 GPIHBP1Q8IV16 184 aa12.17□□□□□ -0.46
PPME1-202ENST00000398427 VPS52Q8N1B4 723 aa12.17□□□□□ -0.46
PPME1-202ENST00000398427 OR6B3Q8NGW1 331 aa12.17□□□□□ -0.46
PPME1-202ENST00000398427 MIEF2Q96C03 454 aa12.17□□□□□ -0.46
PPME1-202ENST00000398427 TIFAQ96CG3 184 aa12.17□□□□□ -0.46
PPME1-202ENST00000398427 IQCDQ96DY2 449 aa12.17□□□□□ -0.46
PPME1-202ENST00000398427 SPAG5Q96R06 1193 aa12.17□□□□□ -0.46
PPME1-202ENST00000398427 TTPALQ9BTX7 342 aa12.17□□□□□ -0.46
PPME1-202ENST00000398427 HERC2P3Q9BVR0 1158 aa12.17□□□□□ -0.46
PPME1-202ENST00000398427 EDEM3Q9BZQ6 932 aa12.17□□□□□ -0.46
PPME1-202ENST00000398427 ARFGAP3Q9NP61 516 aa12.17□□□□□ -0.46
PPME1-202ENST00000398427 DSEQ9UL01 958 aa12.17□□□□□ -0.46
PPME1-202ENST00000398427 BARX2Q9UMQ3 279 aaPredicted RBP12.17□□□□□ -0.46
PPME1-202ENST00000398427 COL4A4P53420 1690 aaPredicted RBP12.16□□□□□ -0.46
PPME1-202ENST00000398427 ARHGEF37A1IGU5 675 aa12.16□□□□□ -0.46
PPME1-202ENST00000398427 LRRC53A6NM62 1247 aa12.16□□□□□ -0.46
PPME1-202ENST00000398427 TUBB4AP04350 444 aa12.16□□□□□ -0.46
PPME1-202ENST00000398427 RB1P06400 928 aa12.16□□□□□ -0.46
PPME1-202ENST00000398427 DNAJB1P25685 340 aa12.16□□□□□ -0.46
PPME1-202ENST00000398427 ZNF394Q53GI3 561 aa12.16□□□□□ -0.46
PPME1-202ENST00000398427 TMEM270Q6UE05 265 aa12.16□□□□□ -0.46
PPME1-202ENST00000398427 TACO1Q9BSH4 297 aaKnown RBP12.16□□□□□ -0.46
PPME1-202ENST00000398427 C11orf84Q9BUA3 381 aaPredicted RBP12.16□□□□□ -0.46
PPME1-202ENST00000398427 DDX43Q9NXZ2 648 aaKnown RBP12.16□□□□□ -0.46
PPME1-202ENST00000398427 VPS18Q9P253 973 aa12.16□□□□□ -0.46
PPME1-202ENST00000398427 CNTN6Q9UQ52 1028 aa12.16□□□□□ -0.46
PPME1-202ENST00000398427 STXBP5LQ9Y2K9 1186 aa12.16□□□□□ -0.46
PPME1-202ENST00000398427 PCDHB4Q9Y5E5 795 aa12.16□□□□□ -0.46
PPME1-202ENST00000398427 OAZ2O95190 189 aa12.16□□□□□ -0.46
PPME1-202ENST00000398427 FAM163BP0C2L3 166 aa12.16□□□□□ -0.46
PPME1-202ENST00000398427 KRT5P13647 590 aa12.16□□□□□ -0.46
PPME1-202ENST00000398427 ACAT1P24752 427 aaKnown RBP12.16□□□□□ -0.46
PPME1-202ENST00000398427 GNL1P36915 607 aaPredicted RBP12.16□□□□□ -0.46
PPME1-202ENST00000398427 LHX1P48742 406 aa12.16□□□□□ -0.46
PPME1-202ENST00000398427 YWHAEP62258 255 aaKnown RBP12.16□□□□□ -0.46
PPME1-202ENST00000398427 MRPL58Q14197 206 aaKnown RBP12.16□□□□□ -0.46
PPME1-202ENST00000398427 PDXDC1Q6P996 788 aa12.16□□□□□ -0.46
PPME1-202ENST00000398427 PRSS55Q6UWB4 352 aaPredicted RBP12.16□□□□□ -0.46
PPME1-202ENST00000398427 PPFIBP1Q86W92 1011 aa12.16□□□□□ -0.46
PPME1-202ENST00000398427 METTL23Q86XA0 190 aa12.16□□□□□ -0.46
PPME1-202ENST00000398427 FAM71AQ8IYT1 594 aa12.16□□□□□ -0.46
PPME1-202ENST00000398427 FBXO22Q8NEZ5 403 aa12.16□□□□□ -0.46
PPME1-202ENST00000398427 SPATA18Q8TC71 538 aa12.16□□□□□ -0.46
PPME1-202ENST00000398427 SPPL3Q8TCT6 385 aa12.16□□□□□ -0.46
PPME1-202ENST00000398427 AUTS2Q8WXX7 1259 aa12.16□□□□□ -0.46
PPME1-202ENST00000398427 ELOVL4Q9GZR5 314 aa12.16□□□□□ -0.46
PPME1-202ENST00000398427 ZBP1Q9H171 429 aa12.16□□□□□ -0.46
PPME1-202ENST00000398427 SNX25Q9H3E2 840 aa12.16□□□□□ -0.46
PPME1-202ENST00000398427 DPEP3Q9H4B8 488 aa12.16□□□□□ -0.46
PPME1-202ENST00000398427 FAM124BQ9H5Z6 455 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms