RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 HSPA13P48723 471 aa11.54□□□□□ -0.56
HPS4-202ENST00000398145 CBWD6Q4V339 395 aa11.54□□□□□ -0.56
HPS4-202ENST00000398145 EFHC2Q5JST6 749 aa11.54□□□□□ -0.56
HPS4-202ENST00000398145 CBWD3Q5JTY5 395 aa11.54□□□□□ -0.56
HPS4-202ENST00000398145 CBWD5Q5RIA9 395 aa11.54□□□□□ -0.56
HPS4-202ENST00000398145 RWDD4Q6NW29 188 aaKnown RBP11.54□□□□□ -0.56
HPS4-202ENST00000398145 C4orf22Q6V702 233 aa11.54□□□□□ -0.56
HPS4-202ENST00000398145 MCOLN2Q8IZK6 566 aa11.54□□□□□ -0.56
HPS4-202ENST00000398145 RNF149Q8NC42 400 aa11.54□□□□□ -0.56
HPS4-202ENST00000398145 DDI1Q8WTU0 396 aa11.54□□□□□ -0.56
HPS4-202ENST00000398145 JADE3Q92613 823 aa11.54□□□□□ -0.56
HPS4-202ENST00000398145 ZNF184Q99676 751 aaPredicted RBP11.54□□□□□ -0.56
HPS4-202ENST00000398145 MMTAG2Q9BU76 263 aaKnown RBP11.54□□□□□ -0.56
HPS4-202ENST00000398145 FSD1LQ9BXM9 530 aa11.54□□□□□ -0.56
HPS4-202ENST00000398145 GPRC5CQ9NQ84 441 aa11.54□□□□□ -0.56
HPS4-202ENST00000398145 RHBDL2Q9NX52 303 aa11.54□□□□□ -0.56
HPS4-202ENST00000398145 SALL4Q9UJQ4 1053 aa11.54□□□□□ -0.56
HPS4-202ENST00000398145 CORO1CQ9ULV4 474 aaPredicted RBP11.54□□□□□ -0.56
HPS4-202ENST00000398145 TLR2O60603 784 aa11.54□□□□□ -0.56
HPS4-202ENST00000398145 TCN1P20061 433 aaPredicted RBP11.54□□□□□ -0.56
HPS4-202ENST00000398145 PEX5P50542 639 aa11.54□□□□□ -0.56
HPS4-202ENST00000398145 CASP5P51878 434 aa11.54□□□□□ -0.56
HPS4-202ENST00000398145 SLC12A3P55017 1021 aa11.54□□□□□ -0.56
HPS4-202ENST00000398145 NCALDP61601 193 aa11.54□□□□□ -0.56
HPS4-202ENST00000398145 SLC10A5Q5PT55 438 aa11.54□□□□□ -0.56
HPS4-202ENST00000398145 SPOCD1Q6ZMY3 1216 aa11.54□□□□□ -0.56
HPS4-202ENST00000398145 POP1Q99575 1024 aaKnown RBP11.54□□□□□ -0.56
HPS4-202ENST00000398145 AKAP10O43572 662 aa11.53□□□□□ -0.56
HPS4-202ENST00000398145 OATP04181 439 aa11.53□□□□□ -0.56
HPS4-202ENST00000398145 ATP4AP20648 1035 aa11.53□□□□□ -0.56
HPS4-202ENST00000398145 SKIV2L2P42285 1042 aaKnown RBP11.53□□□□□ -0.56
HPS4-202ENST00000398145 VCPP55072 806 aaKnown RBP11.53□□□□□ -0.56
HPS4-202ENST00000398145 SPP2Q13103 211 aa11.53□□□□□ -0.56
HPS4-202ENST00000398145 CYP4A22Q5TCH4 519 aa11.53□□□□□ -0.56
HPS4-202ENST00000398145 RSPH3Q86UC2 560 aa11.53□□□□□ -0.56
HPS4-202ENST00000398145 ZNF668Q96K58 619 aaPredicted RBP11.53□□□□□ -0.56
HPS4-202ENST00000398145 AGAP3Q96P47 875 aa11.53□□□□□ -0.56
HPS4-202ENST00000398145 CRAMP1Q96RY5 1269 aa11.53□□□□□ -0.56
HPS4-202ENST00000398145 CCDC90BQ9GZT6 254 aa11.53□□□□□ -0.56
HPS4-202ENST00000398145 ATRNO75882 1429 aa11.53□□□□□ -0.56
HPS4-202ENST00000398145 XPO1O14980 1071 aaKnown RBP11.53□□□□□ -0.56
HPS4-202ENST00000398145 WDR46O15213 610 aaKnown RBP11.53□□□□□ -0.56
HPS4-202ENST00000398145 STRNO43815 780 aa11.53□□□□□ -0.56
HPS4-202ENST00000398145 PTDSS1P48651 473 aaKnown RBP11.53□□□□□ -0.56
HPS4-202ENST00000398145 NUDT2P50583 147 aa11.53□□□□□ -0.56
HPS4-202ENST00000398145 INPP5AQ14642 412 aa11.53□□□□□ -0.56
HPS4-202ENST00000398145 KCNT1Q5JUK3 1230 aa11.53□□□□□ -0.56
HPS4-202ENST00000398145 PRR5LQ6MZQ0 368 aa11.53□□□□□ -0.56
HPS4-202ENST00000398145 OPTNQ96CV9 577 aa11.53□□□□□ -0.56
HPS4-202ENST00000398145 NMD3Q96D46 503 aaKnown RBP11.53□□□□□ -0.56
HPS4-202ENST00000398145 TARS2Q9BW92 718 aaKnown RBP11.53□□□□□ -0.56
HPS4-202ENST00000398145 KLHL4Q9C0H6 718 aa11.53□□□□□ -0.56
HPS4-202ENST00000398145 FAM192AQ9GZU8 254 aa11.53□□□□□ -0.56
HPS4-202ENST00000398145 KIAA1683Q9H0B3 1180 aa11.53□□□□□ -0.56
HPS4-202ENST00000398145 CAAP1Q9H8G2 361 aa11.53□□□□□ -0.56
HPS4-202ENST00000398145 SPC25Q9HBM1 224 aa11.53□□□□□ -0.56
HPS4-202ENST00000398145 TAS2R14Q9NYV8 317 aa11.53□□□□□ -0.56
HPS4-202ENST00000398145 PKD2L2Q9NZM6 624 aa11.53□□□□□ -0.56
HPS4-202ENST00000398145 ZNF212Q9UDV6 495 aa11.53□□□□□ -0.56
HPS4-202ENST00000398145 ENTPD3O75355 529 aa11.53□□□□□ -0.56
HPS4-202ENST00000398145 ADRA1DP25100 572 aa11.53□□□□□ -0.56
HPS4-202ENST00000398145 MAP4P27816 1152 aaKnown RBP11.53□□□□□ -0.56
HPS4-202ENST00000398145 SSTR1P30872 391 aa11.53□□□□□ -0.56
HPS4-202ENST00000398145 HDAC4P56524 1084 aa11.53□□□□□ -0.56
HPS4-202ENST00000398145 KCNA1Q09470 495 aa11.53□□□□□ -0.56
HPS4-202ENST00000398145 RIC1Q4ADV7 1423 aa11.53□□□□□ -0.56
HPS4-202ENST00000398145 FAXCQ5TGI0 409 aa11.53□□□□□ -0.56
HPS4-202ENST00000398145 RNF135Q8IUD6 432 aa11.53□□□□□ -0.56
HPS4-202ENST00000398145 ARHGEF19Q8IW93 802 aa11.53□□□□□ -0.56
HPS4-202ENST00000398145 LNX1Q8TBB1 728 aaPredicted RBP11.53□□□□□ -0.56
HPS4-202ENST00000398145 TOPORSQ9NS56 1045 aaPredicted RBP11.53□□□□□ -0.56
HPS4-202ENST00000398145 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.53□□□□□ -0.56
HPS4-202ENST00000398145 GLRA3O75311 464 aa11.52□□□□□ -0.56
HPS4-202ENST00000398145 PRKCBP05771 671 aa11.52□□□□□ -0.56
HPS4-202ENST00000398145 POLBP06746 335 aa11.52□□□□□ -0.56
HPS4-202ENST00000398145 SLC44A4Q53GD3 710 aa11.52□□□□□ -0.56
HPS4-202ENST00000398145 BOLA3Q53S33 107 aa11.52□□□□□ -0.56
HPS4-202ENST00000398145 ZCCHC9Q8N567 271 aaKnown RBP11.52□□□□□ -0.56
HPS4-202ENST00000398145 ETNPPLQ8TBG4 499 aa11.52□□□□□ -0.56
HPS4-202ENST00000398145 CNBD2Q96M20 576 aa11.52□□□□□ -0.56
HPS4-202ENST00000398145 TASP1Q9H6P5 420 aa11.52□□□□□ -0.56
HPS4-202ENST00000398145 SOX13Q9UN79 622 aa11.52□□□□□ -0.56
HPS4-202ENST00000398145 C2CD2Q9Y426 696 aa11.52□□□□□ -0.56
HPS4-202ENST00000398145 ENTPD5O75356 428 aa11.52□□□□□ -0.56
HPS4-202ENST00000398145 GRAP2O75791 330 aa11.52□□□□□ -0.56
HPS4-202ENST00000398145 NR3C2P08235 984 aa11.52□□□□□ -0.56
HPS4-202ENST00000398145 ARP10275 920 aa11.52□□□□□ -0.56
HPS4-202ENST00000398145 NLRP11P59045 1033 aaKnown RBP11.52□□□□□ -0.56
HPS4-202ENST00000398145 R3HDM1Q15032 1099 aaKnown RBP11.52□□□□□ -0.56
HPS4-202ENST00000398145 ADRM1Q16186 407 aa11.52□□□□□ -0.56
HPS4-202ENST00000398145 UGP2Q16851 508 aa11.52□□□□□ -0.56
HPS4-202ENST00000398145 NOP9Q86U38 636 aaKnown RBP11.52□□□□□ -0.56
HPS4-202ENST00000398145 SULF1Q8IWU6 871 aa11.52□□□□□ -0.56
HPS4-202ENST00000398145 OXNAD1Q96HP4 312 aaPredicted RBP11.52□□□□□ -0.56
HPS4-202ENST00000398145 CLEC11AQ9Y240 323 aa11.52□□□□□ -0.56
HPS4-202ENST00000398145 NCANO14594 1321 aa11.52□□□□□ -0.57
HPS4-202ENST00000398145 NPTX2P47972 431 aa11.52□□□□□ -0.57
HPS4-202ENST00000398145 RGS7P49802 495 aa11.52□□□□□ -0.57
HPS4-202ENST00000398145 BAATQ14032 418 aaPredicted RBP11.52□□□□□ -0.57
HPS4-202ENST00000398145 EMC2Q15006 297 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms