RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 SOAT2O75908 522 aa22.63■■□□□ 1.21
TSPAN4-206ENST00000397408 AFPP02771 609 aaKnown RBP22.63■■□□□ 1.21
TSPAN4-206ENST00000397408 HSP90AA4PQ58FG1 418 aa22.63■■□□□ 1.21
TSPAN4-206ENST00000397408 FAM114A1Q8IWE2 563 aa22.63■■□□□ 1.21
TSPAN4-206ENST00000397408 RPGRIP1Q96KN7 1286 aa22.63■■□□□ 1.21
TSPAN4-206ENST00000397408 DNAJC25Q9H1X3 360 aa22.63■■□□□ 1.21
TSPAN4-206ENST00000397408 DPEP3Q9H4B8 488 aa22.63■■□□□ 1.21
TSPAN4-206ENST00000397408 WDR6Q9NNW5 1121 aaKnown RBP22.63■■□□□ 1.21
TSPAN4-206ENST00000397408 HCFC1R1Q9NWW0 138 aa22.63■■□□□ 1.21
TSPAN4-206ENST00000397408 HSFX1Q9UBD0 423 aa22.63■■□□□ 1.21
TSPAN4-206ENST00000397408 NFE2L3Q9Y4A8 694 aa22.63■■□□□ 1.21
TSPAN4-206ENST00000397408 PMM2O15305 246 aa22.62■■□□□ 1.21
TSPAN4-206ENST00000397408 MTIF2P46199 727 aaKnown RBP22.62■■□□□ 1.21
TSPAN4-206ENST00000397408 NTHL1P78549 312 aa22.62■■□□□ 1.21
TSPAN4-206ENST00000397408 PLD1Q13393 1074 aa22.62■■□□□ 1.21
TSPAN4-206ENST00000397408 FAM171BQ6P995 826 aa22.62■■□□□ 1.21
TSPAN4-206ENST00000397408 ENOX1Q8TC92 643 aaKnown RBP22.62■■□□□ 1.21
TSPAN4-206ENST00000397408 MYLPFQ96A32 169 aa22.62■■□□□ 1.21
TSPAN4-206ENST00000397408 MAGEC2Q9UBF1 373 aaPredicted RBP22.62■■□□□ 1.21
TSPAN4-206ENST00000397408 P4HA2O15460 535 aa22.61■■□□□ 1.21
TSPAN4-206ENST00000397408 ALDH1A3P47895 512 aa22.61■■□□□ 1.21
TSPAN4-206ENST00000397408 CETN1Q12798 172 aa22.61■■□□□ 1.21
TSPAN4-206ENST00000397408 MAPRE1Q15691 268 aaKnown RBP22.61■■□□□ 1.21
TSPAN4-206ENST00000397408 MDH1BQ5I0G3 518 aa22.61■■□□□ 1.21
TSPAN4-206ENST00000397408 SPATA2LQ8IUW3 424 aaPredicted RBP22.61■■□□□ 1.21
TSPAN4-206ENST00000397408 ELMOD1Q8N336 334 aa22.61■■□□□ 1.21
TSPAN4-206ENST00000397408 CYP3A43Q9HB55 503 aa22.61■■□□□ 1.21
TSPAN4-206ENST00000397408 SAMSN1Q9NSI8 373 aaKnown RBP22.61■■□□□ 1.21
TSPAN4-206ENST00000397408 HMGXB4Q9UGU5 601 aa22.61■■□□□ 1.21
TSPAN4-206ENST00000397408 HAPLN1P10915 354 aaPredicted RBP22.6■■□□□ 1.21
TSPAN4-206ENST00000397408 PTPN1P18031 435 aaKnown RBP22.6■■□□□ 1.21
TSPAN4-206ENST00000397408 CD58P19256 250 aa22.6■■□□□ 1.21
TSPAN4-206ENST00000397408 SSTR3P32745 418 aaPredicted RBP22.6■■□□□ 1.21
TSPAN4-206ENST00000397408 TUFMP49411 452 aaKnown RBP22.6■■□□□ 1.21
TSPAN4-206ENST00000397408 NDST1P52848 882 aa22.6■■□□□ 1.21
TSPAN4-206ENST00000397408 C4orf50Q6ZRC1 276 aa22.6■■□□□ 1.21
TSPAN4-206ENST00000397408 B3GALNT2Q8NCR0 500 aa22.6■■□□□ 1.21
TSPAN4-206ENST00000397408 TATDN2Q93075 761 aa22.6■■□□□ 1.21
TSPAN4-206ENST00000397408 ARID3AQ99856 593 aa22.6■■□□□ 1.21
TSPAN4-206ENST00000397408 LPIN3Q9BQK8 851 aa22.6■■□□□ 1.21
TSPAN4-206ENST00000397408 COL25A1Q9BXS0 654 aaPredicted RBP22.6■■□□□ 1.21
TSPAN4-206ENST00000397408 ABCB6Q9NP58 842 aa22.6■■□□□ 1.21
TSPAN4-206ENST00000397408 CEP72Q9P209 647 aa22.6■■□□□ 1.21
TSPAN4-206ENST00000397408 DNMT3BQ9UBC3 853 aaKnown RBP22.6■■□□□ 1.21
TSPAN4-206ENST00000397408 EPHB3P54753 998 aa22.59■■□□□ 1.21
TSPAN4-206ENST00000397408 CYP27A1Q02318 531 aa22.59■■□□□ 1.21
TSPAN4-206ENST00000397408 INCA1Q0VD86 236 aa22.59■■□□□ 1.21
TSPAN4-206ENST00000397408 LRMPQ12912 555 aa22.59■■□□□ 1.21
TSPAN4-206ENST00000397408 ORC1Q13415 861 aa22.59■■□□□ 1.21
TSPAN4-206ENST00000397408 CFAP221Q4G0U5 840 aa22.59■■□□□ 1.21
TSPAN4-206ENST00000397408 PABPC1LQ4VXU2 614 aaKnown RBP22.59■■□□□ 1.21
TSPAN4-206ENST00000397408 IQCEQ6IPM2 695 aa22.59■■□□□ 1.21
TSPAN4-206ENST00000397408 GET4Q7L5D6 327 aaPredicted RBP22.59■■□□□ 1.21
TSPAN4-206ENST00000397408 MYCBPAPQ8TBZ2 947 aa22.59■■□□□ 1.21
TSPAN4-206ENST00000397408 PCED1BQ96HM7 432 aa22.59■■□□□ 1.21
TSPAN4-206ENST00000397408 FUBP3Q96I24 572 aaKnown RBP eCLIP22.59■■□□□ 1.21
TSPAN4-206ENST00000397408 FAXDC2Q96IV6 333 aa22.59■■□□□ 1.21
TSPAN4-206ENST00000397408 TNIP3Q96KP6 325 aa22.59■■□□□ 1.21
TSPAN4-206ENST00000397408 ZNF512Q96ME7 567 aaPredicted RBP22.59■■□□□ 1.21
TSPAN4-206ENST00000397408 CORO1BQ9BR76 489 aa22.59■■□□□ 1.21
TSPAN4-206ENST00000397408 NR2E1Q9Y466 385 aa22.59■■□□□ 1.21
TSPAN4-206ENST00000397408 KCNJ18B7U540 433 aa22.58■■□□□ 1.21
TSPAN4-206ENST00000397408 LOC730098B7Z3J9 87 aa22.58■■□□□ 1.21
TSPAN4-206ENST00000397408 RHOP08100 348 aa22.58■■□□□ 1.21
TSPAN4-206ENST00000397408 PTPN2P17706 415 aa22.58■■□□□ 1.21
TSPAN4-206ENST00000397408 ATF6P18850 670 aa22.58■■□□□ 1.21
TSPAN4-206ENST00000397408 FSHRP23945 695 aa22.58■■□□□ 1.21
TSPAN4-206ENST00000397408 CYP2F1P24903 491 aa22.58■■□□□ 1.21
TSPAN4-206ENST00000397408 KCNJ12Q14500 433 aa22.58■■□□□ 1.21
TSPAN4-206ENST00000397408 ANO6Q4KMQ2 910 aa22.58■■□□□ 1.21
TSPAN4-206ENST00000397408 UNC93AQ86WB7 457 aa22.58■■□□□ 1.21
TSPAN4-206ENST00000397408 GJD3Q8N144 294 aa22.58■■□□□ 1.21
TSPAN4-206ENST00000397408 TDRD5Q8NAT2 981 aaKnown RBP22.58■■□□□ 1.21
TSPAN4-206ENST00000397408 SYCE3A1L190 88 aa22.57■■□□□ 1.2
TSPAN4-206ENST00000397408 C19orf67A6NJJ6 358 aa22.57■■□□□ 1.2
TSPAN4-206ENST00000397408 C2CD4DB7Z1M9 353 aa22.57■■□□□ 1.2
TSPAN4-206ENST00000397408 LETM1O95202 739 aaPredicted RBP22.57■■□□□ 1.2
TSPAN4-206ENST00000397408 GPR15P49685 360 aa22.57■■□□□ 1.2
TSPAN4-206ENST00000397408 MYL5Q02045 173 aa22.57■■□□□ 1.2
TSPAN4-206ENST00000397408 CUL2Q13617 745 aa22.57■■□□□ 1.2
TSPAN4-206ENST00000397408 VEPH1Q14D04 833 aa22.57■■□□□ 1.2
TSPAN4-206ENST00000397408 MAN2A1Q16706 1144 aa22.57■■□□□ 1.2
TSPAN4-206ENST00000397408 SKOR2Q2VWA4 1001 aaPredicted RBP22.57■■□□□ 1.2
TSPAN4-206ENST00000397408 ACOT1Q86TX2 421 aa22.57■■□□□ 1.2
TSPAN4-206ENST00000397408 FAM200AQ8TCP9 573 aa22.57■■□□□ 1.2
TSPAN4-206ENST00000397408 NT5C1BQ96P26 610 aa22.57■■□□□ 1.2
TSPAN4-206ENST00000397408 TWNKQ96RR1 684 aa22.57■■□□□ 1.2
TSPAN4-206ENST00000397408 CD320Q9NPF0 282 aa22.57■■□□□ 1.2
TSPAN4-206ENST00000397408 GCNT4Q9P109 453 aa22.57■■□□□ 1.2
TSPAN4-206ENST00000397408 USTQ9Y2C2 406 aa22.57■■□□□ 1.2
TSPAN4-206ENST00000397408 NOTCH4Q99466 2003 aa22.57■■□□□ 1.2
TSPAN4-206ENST00000397408 PTPRDP23468 1912 aa22.57■■□□□ 1.2
TSPAN4-206ENST00000397408 CILPO75339 1184 aa22.57■■□□□ 1.2
TSPAN4-206ENST00000397408 PRKCSHP14314 528 aaPredicted RBP22.57■■□□□ 1.2
TSPAN4-206ENST00000397408 BDNFP23560 247 aa22.57■■□□□ 1.2
TSPAN4-206ENST00000397408 OTOP3Q7RTS5 596 aa22.57■■□□□ 1.2
TSPAN4-206ENST00000397408 HS6ST3Q8IZP7 471 aa22.57■■□□□ 1.2
TSPAN4-206ENST00000397408 LMO3Q8TAP4 145 aa22.57■■□□□ 1.2
TSPAN4-206ENST00000397408 TUBGCP2Q9BSJ2 902 aa22.57■■□□□ 1.2
TSPAN4-206ENST00000397408 INTS2Q9H0H0 1204 aaKnown RBP22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms