RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 ALDH7A1P49419 539 aaKnown RBP15.86■□□□□ 0.13
CAPN3-207ENST00000397200 HADHBP55084 474 aaKnown RBP15.86■□□□□ 0.13
CAPN3-207ENST00000397200 NAP1L1P55209 391 aaKnown RBP15.86■□□□□ 0.13
CAPN3-207ENST00000397200 MLLT1Q03111 559 aaPredicted RBP15.86■□□□□ 0.13
CAPN3-207ENST00000397200 C2orf54Q08AI8 447 aa15.86■□□□□ 0.13
CAPN3-207ENST00000397200 RFFLQ8WZ73 363 aa15.86■□□□□ 0.13
CAPN3-207ENST00000397200 AGPAT1Q99943 283 aa15.86■□□□□ 0.13
CAPN3-207ENST00000397200 STXBP5LQ9Y2K9 1186 aa15.86■□□□□ 0.13
CAPN3-207ENST00000397200 SNX9Q9Y5X1 595 aa15.86■□□□□ 0.13
CAPN3-207ENST00000397200 GBF1Q92538 1859 aa15.86■□□□□ 0.13
CAPN3-207ENST00000397200 PDE4DIPQ5VU43 2346 aa15.85■□□□□ 0.13
CAPN3-207ENST00000397200 CARNS1A5YM72 827 aa15.85■□□□□ 0.13
CAPN3-207ENST00000397200 TMEM189-UBE2V1I3L0A0 370 aa15.85■□□□□ 0.13
CAPN3-207ENST00000397200 SPTLC1O15269 473 aa15.85■□□□□ 0.13
CAPN3-207ENST00000397200 FTCDO95954 541 aa15.85■□□□□ 0.13
CAPN3-207ENST00000397200 PLA2G4AP47712 749 aa15.85■□□□□ 0.13
CAPN3-207ENST00000397200 MFAP3P55082 362 aa15.85■□□□□ 0.13
CAPN3-207ENST00000397200 CBX1P83916 185 aa15.85■□□□□ 0.13
CAPN3-207ENST00000397200 GCNT1Q02742 428 aa15.85■□□□□ 0.13
CAPN3-207ENST00000397200 CUL2Q13617 745 aa15.85■□□□□ 0.13
CAPN3-207ENST00000397200 SCARA5Q6ZMJ2 495 aa15.85■□□□□ 0.13
CAPN3-207ENST00000397200 SP7Q8TDD2 431 aaPredicted RBP15.85■□□□□ 0.13
CAPN3-207ENST00000397200 EPS8L1Q8TE68 723 aa15.85■□□□□ 0.13
CAPN3-207ENST00000397200 HASPINQ8TF76 798 aa15.85■□□□□ 0.13
CAPN3-207ENST00000397200 KAT5Q92993 513 aa15.85■□□□□ 0.13
CAPN3-207ENST00000397200 FAXDC2Q96IV6 333 aa15.85■□□□□ 0.13
CAPN3-207ENST00000397200 CALR3Q96L12 384 aaKnown RBP15.85■□□□□ 0.13
CAPN3-207ENST00000397200 ZNF558Q96NG5 402 aa15.85■□□□□ 0.13
CAPN3-207ENST00000397200 ISCUQ9H1K1 167 aa15.85■□□□□ 0.13
CAPN3-207ENST00000397200 ABCB6Q9NP58 842 aa15.85■□□□□ 0.13
CAPN3-207ENST00000397200 AAASQ9NRG9 546 aa15.85■□□□□ 0.13
CAPN3-207ENST00000397200 GDAP2Q9NXN4 497 aa15.85■□□□□ 0.13
CAPN3-207ENST00000397200 NOCTQ9UK39 431 aaKnown RBP15.85■□□□□ 0.13
CAPN3-207ENST00000397200 L1RE1Q9UN81 338 aa15.85■□□□□ 0.13
CAPN3-207ENST00000397200 POLIQ9UNA4 740 aa15.85■□□□□ 0.13
CAPN3-207ENST00000397200 ANKRD62A6NC57 917 aa15.84■□□□□ 0.13
CAPN3-207ENST00000397200 GRXCR1A8MXD5 290 aa15.84■□□□□ 0.13
CAPN3-207ENST00000397200 F8W810 466 aa15.84■□□□□ 0.13
CAPN3-207ENST00000397200 TADA2AO75478 443 aa15.84■□□□□ 0.13
CAPN3-207ENST00000397200 TNFAIP3P21580 790 aa15.84■□□□□ 0.13
CAPN3-207ENST00000397200 IGFBP6P24592 240 aaPredicted RBP15.84■□□□□ 0.13
CAPN3-207ENST00000397200 PBX3P40426 434 aa15.84■□□□□ 0.13
CAPN3-207ENST00000397200 PAFAH1B1P43034 410 aa15.84■□□□□ 0.13
CAPN3-207ENST00000397200 ASPAP45381 313 aa15.84■□□□□ 0.13
CAPN3-207ENST00000397200 RABGGTBP53611 331 aa15.84■□□□□ 0.13
CAPN3-207ENST00000397200 CFAP221Q4G0U5 840 aa15.84■□□□□ 0.13
CAPN3-207ENST00000397200 FAM109BQ6ICB4 259 aaPredicted RBP15.84■□□□□ 0.13
CAPN3-207ENST00000397200 KCNT2Q6UVM3 1135 aa15.84■□□□□ 0.13
CAPN3-207ENST00000397200 DSTYKQ6XUX3 929 aa15.84■□□□□ 0.13
CAPN3-207ENST00000397200 ENOSF1Q7L5Y1 443 aa15.84■□□□□ 0.13
CAPN3-207ENST00000397200 ADAM28Q9UKQ2 775 aa15.84■□□□□ 0.13
CAPN3-207ENST00000397200 NLRC5Q86WI3 1866 aa15.84■□□□□ 0.13
CAPN3-207ENST00000397200 NT5C1B-RDH14C9J2C7 533 aa15.83■□□□□ 0.13
CAPN3-207ENST00000397200 TRAPPC3O43617 180 aa15.83■□□□□ 0.13
CAPN3-207ENST00000397200 HUS1O60921 280 aa15.83■□□□□ 0.13
CAPN3-207ENST00000397200 ITGB1P05556 798 aa15.83■□□□□ 0.13
CAPN3-207ENST00000397200 CXCR5P32302 372 aa15.83■□□□□ 0.13
CAPN3-207ENST00000397200 BRCC3P46736 316 aa15.83■□□□□ 0.13
CAPN3-207ENST00000397200 AARSP49588 968 aaKnown RBP eCLIP15.83■□□□□ 0.13
CAPN3-207ENST00000397200 CCDC181Q5TID7 509 aa15.83■□□□□ 0.13
CAPN3-207ENST00000397200 CD300LGQ6UXG3 332 aa15.83■□□□□ 0.13
CAPN3-207ENST00000397200 DNAAF5Q86Y56 855 aa15.83■□□□□ 0.13
CAPN3-207ENST00000397200 PALB2Q86YC2 1186 aa15.83■□□□□ 0.13
CAPN3-207ENST00000397200 SYCE1Q8N0S2 351 aa15.83■□□□□ 0.13
CAPN3-207ENST00000397200 COLGALT1Q8NBJ5 622 aa15.83■□□□□ 0.13
CAPN3-207ENST00000397200 SLC20A1Q8WUM9 679 aa15.83■□□□□ 0.13
CAPN3-207ENST00000397200 SENP8Q96LD8 212 aa15.83■□□□□ 0.13
CAPN3-207ENST00000397200 BCO2Q9BYV7 579 aa15.83■□□□□ 0.13
CAPN3-207ENST00000397200 MARCH5Q9NX47 278 aa15.83■□□□□ 0.13
CAPN3-207ENST00000397200 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.83■□□□□ 0.12
CAPN3-207ENST00000397200 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.83■□□□□ 0.12
CAPN3-207ENST00000397200 ARHGEF37A1IGU5 675 aa15.83■□□□□ 0.12
CAPN3-207ENST00000397200 LCHNA4D1U4 455 aa15.83■□□□□ 0.12
CAPN3-207ENST00000397200 CYB561D2O14569 222 aa15.83■□□□□ 0.12
CAPN3-207ENST00000397200 CHRNB2P17787 502 aa15.83■□□□□ 0.12
CAPN3-207ENST00000397200 YWHAEP62258 255 aaKnown RBP15.83■□□□□ 0.12
CAPN3-207ENST00000397200 RPS6KA1Q15418 735 aa15.83■□□□□ 0.12
CAPN3-207ENST00000397200 TIGD5Q53EQ6 642 aa15.83■□□□□ 0.12
CAPN3-207ENST00000397200 TDHQ8IZJ6 230 aa15.83■□□□□ 0.12
CAPN3-207ENST00000397200 TOP6BLQ8N6T0 577 aa15.83■□□□□ 0.12
CAPN3-207ENST00000397200 APPL2Q8NEU8 664 aa15.83■□□□□ 0.12
CAPN3-207ENST00000397200 CTNNBL1Q8WYA6 563 aaPredicted RBP15.83■□□□□ 0.12
CAPN3-207ENST00000397200 PBKQ96KB5 322 aa15.83■□□□□ 0.12
CAPN3-207ENST00000397200 SUSD3Q96L08 255 aa15.83■□□□□ 0.12
CAPN3-207ENST00000397200 PSMB7Q99436 277 aa15.83■□□□□ 0.12
CAPN3-207ENST00000397200 SMYD3Q9H7B4 428 aa15.83■□□□□ 0.12
CAPN3-207ENST00000397200 CYP3A43Q9HB55 503 aa15.83■□□□□ 0.12
CAPN3-207ENST00000397200 TMEM59LQ9UK28 342 aa15.83■□□□□ 0.12
CAPN3-207ENST00000397200 PCDHB12Q9Y5F1 795 aa15.83■□□□□ 0.12
CAPN3-207ENST00000397200 PCDHA11Q9Y5I1 949 aa15.83■□□□□ 0.12
CAPN3-207ENST00000397200 I3L4J1 428 aa15.82■□□□□ 0.12
CAPN3-207ENST00000397200 WEE2P0C1S8 567 aa15.82■□□□□ 0.12
CAPN3-207ENST00000397200 ODC1P11926 461 aa15.82■□□□□ 0.12
CAPN3-207ENST00000397200 GZMAP12544 262 aa15.82■□□□□ 0.12
CAPN3-207ENST00000397200 TNFRSF8P28908 595 aa15.82■□□□□ 0.12
CAPN3-207ENST00000397200 PPM1AP35813 382 aa15.82■□□□□ 0.12
CAPN3-207ENST00000397200 NOP2P46087 812 aaKnown RBP15.82■□□□□ 0.12
CAPN3-207ENST00000397200 RAP1GAPP47736 663 aa15.82■□□□□ 0.12
CAPN3-207ENST00000397200 GLE1Q53GS7 698 aaKnown RBP15.82■□□□□ 0.12
CAPN3-207ENST00000397200 DPH6Q7L8W6 267 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms