RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 TRIM16O95361 564 aa18.17■□□□□ 0.5
MCF2L-208ENST00000397030 RPS6P62753 249 aaKnown RBP18.17■□□□□ 0.5
MCF2L-208ENST00000397030 KDSRQ06136 332 aa18.17■□□□□ 0.5
MCF2L-208ENST00000397030 CLEC16AQ2KHT3 1053 aa18.17■□□□□ 0.5
MCF2L-208ENST00000397030 TRIM65Q6PJ69 517 aa18.17■□□□□ 0.5
MCF2L-208ENST00000397030 PAWRQ96IZ0 340 aaKnown RBP18.17■□□□□ 0.5
MCF2L-208ENST00000397030 CHORDC1Q9UHD1 332 aaPredicted RBP18.17■□□□□ 0.5
MCF2L-208ENST00000397030 VWA5AO00534 786 aa18.16■□□□□ 0.5
MCF2L-208ENST00000397030 ATP6V1C1P21283 382 aa18.16■□□□□ 0.5
MCF2L-208ENST00000397030 ACOT1Q86TX2 421 aa18.16■□□□□ 0.5
MCF2L-208ENST00000397030 COMMD2Q86X83 199 aa18.16■□□□□ 0.5
MCF2L-208ENST00000397030 CYGBQ8WWM9 190 aa18.16■□□□□ 0.5
MCF2L-208ENST00000397030 GLIS2Q9BZE0 524 aaPredicted RBP18.16■□□□□ 0.5
MCF2L-208ENST00000397030 RSPH9Q9H1X1 276 aaPredicted RBP18.16■□□□□ 0.5
MCF2L-208ENST00000397030 SMPD4Q9NXE4 827 aa18.16■□□□□ 0.5
MCF2L-208ENST00000397030 APEX2Q9UBZ4 518 aa18.16■□□□□ 0.5
MCF2L-208ENST00000397030 FOXN1O15353 648 aa18.16■□□□□ 0.5
MCF2L-208ENST00000397030 CSDE1O75534 798 aaKnown RBP18.16■□□□□ 0.5
MCF2L-208ENST00000397030 NUDT14O95848 222 aa18.16■□□□□ 0.5
MCF2L-208ENST00000397030 PDHA1P08559 390 aa18.16■□□□□ 0.5
MCF2L-208ENST00000397030 GUCY2CP25092 1073 aa18.16■□□□□ 0.5
MCF2L-208ENST00000397030 PNPLA4P41247 253 aa18.16■□□□□ 0.5
MCF2L-208ENST00000397030 PLA2G4AP47712 749 aa18.16■□□□□ 0.5
MCF2L-208ENST00000397030 ARID5BQ14865 1188 aa18.16■□□□□ 0.5
MCF2L-208ENST00000397030 PDK1Q15118 436 aa18.16■□□□□ 0.5
MCF2L-208ENST00000397030 HHIPL2Q6UWX4 724 aa18.16■□□□□ 0.5
MCF2L-208ENST00000397030 LAYNQ6UX15 382 aa18.16■□□□□ 0.5
MCF2L-208ENST00000397030 CEP68Q76N32 757 aa18.16■□□□□ 0.5
MCF2L-208ENST00000397030 OSBPL9Q96SU4 736 aa18.16■□□□□ 0.5
MCF2L-208ENST00000397030 CNTNAP2Q9UHC6 1331 aa18.16■□□□□ 0.5
MCF2L-208ENST00000397030 MAP3K6O95382 1288 aa18.16■□□□□ 0.5
MCF2L-208ENST00000397030 PTGISQ16647 500 aa18.16■□□□□ 0.5
MCF2L-208ENST00000397030 SLC35G2Q8TBE7 412 aa18.16■□□□□ 0.5
MCF2L-208ENST00000397030 RNF112Q9ULX5 631 aa18.16■□□□□ 0.5
MCF2L-208ENST00000397030 CHMP2BQ9UQN3 213 aa18.16■□□□□ 0.5
MCF2L-208ENST00000397030 KIAA0391O15091 583 aaKnown RBP18.16■□□□□ 0.5
MCF2L-208ENST00000397030 AKAP10O43572 662 aa18.16■□□□□ 0.5
MCF2L-208ENST00000397030 WDR47O94967 919 aa18.16■□□□□ 0.5
MCF2L-208ENST00000397030 ITGB6P18564 788 aa18.16■□□□□ 0.5
MCF2L-208ENST00000397030 FAR2Q96K12 515 aa18.16■□□□□ 0.5
MCF2L-208ENST00000397030 FBXO28Q9NVF7 368 aa18.16■□□□□ 0.5
MCF2L-208ENST00000397030 FZD1Q9UP38 647 aa18.16■□□□□ 0.5
MCF2L-208ENST00000397030 CLASP1Q7Z460 1538 aa18.16■□□□□ 0.5
MCF2L-208ENST00000397030 PRIM2P49643 509 aa18.16■□□□□ 0.5
MCF2L-208ENST00000397030 DENND5BQ6ZUT9 1274 aa18.16■□□□□ 0.5
MCF2L-208ENST00000397030 MTSS1LQ765P7 747 aa18.16■□□□□ 0.5
MCF2L-208ENST00000397030 MMGT1Q8N4V1 131 aa18.16■□□□□ 0.5
MCF2L-208ENST00000397030 UNC13AQ9UPW8 1703 aa18.16■□□□□ 0.5
MCF2L-208ENST00000397030 ADM5C9JUS6 153 aa18.15■□□□□ 0.5
MCF2L-208ENST00000397030 CASP8Q14790 479 aa18.15■□□□□ 0.5
MCF2L-208ENST00000397030 TRIM60Q495X7 471 aa18.15■□□□□ 0.5
MCF2L-208ENST00000397030 GALNTL6Q49A17 601 aa18.15■□□□□ 0.5
MCF2L-208ENST00000397030 TRMT11Q7Z4G4 463 aaKnown RBP18.15■□□□□ 0.5
MCF2L-208ENST00000397030 SGF29Q96ES7 293 aa18.15■□□□□ 0.5
MCF2L-208ENST00000397030 NCAPD2Q15021 1401 aa18.15■□□□□ 0.5
MCF2L-208ENST00000397030 IQSEC2Q5JU85 1478 aa18.15■□□□□ 0.5
MCF2L-208ENST00000397030 A8MX80 341 aa18.15■□□□□ 0.5
MCF2L-208ENST00000397030 NFICP08651 508 aa18.15■□□□□ 0.5
MCF2L-208ENST00000397030 BTNL9Q6UXG8 535 aa18.15■□□□□ 0.5
MCF2L-208ENST00000397030 CENPTQ96BT3 561 aa18.15■□□□□ 0.5
MCF2L-208ENST00000397030 MTFR1LQ9H019 292 aa18.15■□□□□ 0.5
MCF2L-208ENST00000397030 DPP7Q9UHL4 492 aa18.15■□□□□ 0.5
MCF2L-208ENST00000397030 UBQLN1Q9UMX0 589 aaKnown RBP18.15■□□□□ 0.5
MCF2L-208ENST00000397030 ENO2P09104 434 aaPredicted RBP18.15■□□□□ 0.5
MCF2L-208ENST00000397030 GYS2P54840 703 aa18.15■□□□□ 0.5
MCF2L-208ENST00000397030 ACOX1Q15067 660 aa18.15■□□□□ 0.5
MCF2L-208ENST00000397030 IYDQ6PHW0 289 aa18.15■□□□□ 0.5
MCF2L-208ENST00000397030 SETD4Q9NVD3 440 aa18.15■□□□□ 0.5
MCF2L-208ENST00000397030 MAN1A2O60476 641 aa18.15■□□□□ 0.5
MCF2L-208ENST00000397030 YWHAZP63104 245 aaKnown RBP18.15■□□□□ 0.5
MCF2L-208ENST00000397030 INPP5AQ14642 412 aa18.15■□□□□ 0.5
MCF2L-208ENST00000397030 ERO1BQ86YB8 467 aa18.15■□□□□ 0.5
MCF2L-208ENST00000397030 OSBPL3Q9H4L5 887 aa18.15■□□□□ 0.5
MCF2L-208ENST00000397030 CDYLQ9Y232 598 aa18.15■□□□□ 0.5
MCF2L-208ENST00000397030 HECW2Q9P2P5 1572 aa18.15■□□□□ 0.5
MCF2L-208ENST00000397030 ZW10O43264 779 aa18.15■□□□□ 0.5
MCF2L-208ENST00000397030 STAU1O95793 577 aaKnown RBP18.15■□□□□ 0.5
MCF2L-208ENST00000397030 AP2B1P63010 937 aa18.15■□□□□ 0.5
MCF2L-208ENST00000397030 COL23A1Q86Y22 540 aaPredicted RBP18.15■□□□□ 0.5
MCF2L-208ENST00000397030 OSMRQ99650 979 aa18.15■□□□□ 0.5
MCF2L-208ENST00000397030 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.15■□□□□ 0.5
MCF2L-208ENST00000397030 PDZK1P1A8MUH7 402 aa18.14■□□□□ 0.5
MCF2L-208ENST00000397030 CLYBLQ8N0X4 340 aa18.14■□□□□ 0.5
MCF2L-208ENST00000397030 KCTD10Q9H3F6 313 aa18.14■□□□□ 0.5
MCF2L-208ENST00000397030 THP07101 528 aa18.14■□□□□ 0.49
MCF2L-208ENST00000397030 SLC1A1P43005 524 aa18.14■□□□□ 0.49
MCF2L-208ENST00000397030 PIGHQ14442 188 aaPredicted RBP18.14■□□□□ 0.49
MCF2L-208ENST00000397030 CYTH1Q15438 398 aa18.14■□□□□ 0.49
MCF2L-208ENST00000397030 TRADDQ15628 312 aa18.14■□□□□ 0.49
MCF2L-208ENST00000397030 UGT3A1Q6NUS8 523 aa18.14■□□□□ 0.49
MCF2L-208ENST00000397030 NBPF15Q8N660 670 aa18.14■□□□□ 0.49
MCF2L-208ENST00000397030 AGBL3Q8NEM8 1001 aa18.14■□□□□ 0.49
MCF2L-208ENST00000397030 DNAJB3Q8WWF6 145 aa18.14■□□□□ 0.49
MCF2L-208ENST00000397030 XPNPEP3Q9NQH7 507 aa18.14■□□□□ 0.49
MCF2L-208ENST00000397030 NYAP2Q9P242 653 aa18.14■□□□□ 0.49
MCF2L-208ENST00000397030 GGT7Q9UJ14 662 aa18.14■□□□□ 0.49
MCF2L-208ENST00000397030 IFRD1O00458 451 aaPredicted RBP18.14■□□□□ 0.49
MCF2L-208ENST00000397030 ALDH9A1P49189 494 aa18.14■□□□□ 0.49
MCF2L-208ENST00000397030 C16orf62Q7Z3J2 963 aa18.14■□□□□ 0.49
MCF2L-208ENST00000397030 NT5DC3Q86UY8 548 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms