RNA–Protein interactions for RNA: ENST00000396682.6

RPA3-202, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RPA3, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-202ENST00000396682 GCNAQ96QF7 691 aa14.31□□□□□ -0.12
RPA3-202ENST00000396682 FBXO2Q9UK22 296 aaPredicted RBP14.31□□□□□ -0.12
RPA3-202ENST00000396682 CLIC4Q9Y696 253 aa14.31□□□□□ -0.12
RPA3-202ENST00000396682 ZNF638Q14966 1978 aaKnown RBP14.31□□□□□ -0.12
RPA3-202ENST00000396682 MAP1BP46821 2468 aaKnown RBP14.31□□□□□ -0.12
RPA3-202ENST00000396682 SPAG17Q6Q759 2223 aa14.3□□□□□ -0.12
RPA3-202ENST00000396682 MYMKA6NI61 221 aa14.3□□□□□ -0.12
RPA3-202ENST00000396682 IL18RAPO95256 599 aa14.3□□□□□ -0.12
RPA3-202ENST00000396682 POLR2BP30876 1174 aaKnown RBP14.3□□□□□ -0.12
RPA3-202ENST00000396682 CASP5P51878 434 aa14.3□□□□□ -0.12
RPA3-202ENST00000396682 RUNX3Q13761 415 aa14.3□□□□□ -0.12
RPA3-202ENST00000396682 TAF12Q16514 161 aa14.3□□□□□ -0.12
RPA3-202ENST00000396682 CCDC142Q17RM4 750 aa14.3□□□□□ -0.12
RPA3-202ENST00000396682 SDHAF4Q5VUM1 108 aa14.3□□□□□ -0.12
RPA3-202ENST00000396682 NAIF1Q69YI7 327 aaPredicted RBP14.3□□□□□ -0.12
RPA3-202ENST00000396682 TXNDC8Q6A555 127 aa14.3□□□□□ -0.12
RPA3-202ENST00000396682 WDR5BQ86VZ2 330 aa14.3□□□□□ -0.12
RPA3-202ENST00000396682 NT5DC4Q86YG4 428 aa14.3□□□□□ -0.12
RPA3-202ENST00000396682 DCP1BQ8IZD4 617 aaKnown RBP14.3□□□□□ -0.12
RPA3-202ENST00000396682 PIAS4Q8N2W9 510 aaPredicted RBP14.3□□□□□ -0.12
RPA3-202ENST00000396682 C1orf127Q8N9H9 656 aa14.3□□□□□ -0.12
RPA3-202ENST00000396682 DNAJC19Q96DA6 116 aa14.3□□□□□ -0.12
RPA3-202ENST00000396682 SAAL1Q96ER3 474 aa14.3□□□□□ -0.12
RPA3-202ENST00000396682 PKMYT1Q99640 499 aa14.3□□□□□ -0.12
RPA3-202ENST00000396682 FAM213AQ9BRX8 229 aa14.3□□□□□ -0.12
RPA3-202ENST00000396682 PI4K2AQ9BTU6 479 aa14.3□□□□□ -0.12
RPA3-202ENST00000396682 FGFBP2Q9BYJ0 223 aa14.3□□□□□ -0.12
RPA3-202ENST00000396682 EBF3Q9H4W6 596 aa14.3□□□□□ -0.12
RPA3-202ENST00000396682 FBRSL1Q9HCM7 1045 aaKnown RBP14.3□□□□□ -0.12
RPA3-202ENST00000396682 THG1LQ9NWX6 298 aaKnown RBP14.3□□□□□ -0.12
RPA3-202ENST00000396682 TBC1D7Q9P0N9 293 aa14.3□□□□□ -0.12
RPA3-202ENST00000396682 L1RE1Q9UN81 338 aa14.3□□□□□ -0.12
RPA3-202ENST00000396682 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.3□□□□□ -0.12
RPA3-202ENST00000396682 PCDHB5Q9Y5E4 795 aa14.3□□□□□ -0.12
RPA3-202ENST00000396682 EML5Q05BV3 1969 aa14.29□□□□□ -0.12
RPA3-202ENST00000396682 ITGB3P05106 788 aa14.29□□□□□ -0.12
RPA3-202ENST00000396682 ADRB1P08588 477 aa14.29□□□□□ -0.12
RPA3-202ENST00000396682 ARSAP15289 507 aa14.29□□□□□ -0.12
RPA3-202ENST00000396682 ACAT1P24752 427 aaKnown RBP14.29□□□□□ -0.12
RPA3-202ENST00000396682 AVPR1AP37288 418 aa14.29□□□□□ -0.12
RPA3-202ENST00000396682 PNPLA4P41247 253 aa14.29□□□□□ -0.12
RPA3-202ENST00000396682 PXNP49023 591 aaPredicted RBP14.29□□□□□ -0.12
RPA3-202ENST00000396682 TFAMQ00059 246 aaKnown RBP14.29□□□□□ -0.12
RPA3-202ENST00000396682 POSTNQ15063 836 aa14.29□□□□□ -0.12
RPA3-202ENST00000396682 L1TD1Q5T7N2 865 aaKnown RBP14.29□□□□□ -0.12
RPA3-202ENST00000396682 OSTM1Q86WC4 334 aa14.29□□□□□ -0.12
RPA3-202ENST00000396682 BRSK2Q8IWQ3 736 aa14.29□□□□□ -0.12
RPA3-202ENST00000396682 LEO1Q8WVC0 666 aaPredicted RBP14.29□□□□□ -0.12
RPA3-202ENST00000396682 ZNF560Q96MR9 790 aa14.29□□□□□ -0.12
RPA3-202ENST00000396682 MRPL44Q9H9J2 332 aaKnown RBP14.29□□□□□ -0.12
RPA3-202ENST00000396682 TDP1Q9NUW8 608 aa14.29□□□□□ -0.12
RPA3-202ENST00000396682 POLR3BQ9NW08 1133 aaPredicted RBP14.29□□□□□ -0.12
RPA3-202ENST00000396682 STK17AQ9UEE5 414 aa14.29□□□□□ -0.12
RPA3-202ENST00000396682 ZMYM5Q9UJ78 669 aa14.29□□□□□ -0.12
RPA3-202ENST00000396682 AGAP1Q9UPQ3 857 aa14.29□□□□□ -0.12
RPA3-202ENST00000396682 GREB1Q4ZG55 1949 aa14.29□□□□□ -0.12
RPA3-202ENST00000396682 ZFHX4Q86UP3 3567 aa14.28□□□□□ -0.12
RPA3-202ENST00000396682 TRDMT1O14717 391 aaKnown RBP14.28□□□□□ -0.12
RPA3-202ENST00000396682 HCRTO43612 131 aa14.28□□□□□ -0.12
RPA3-202ENST00000396682 PRPF40AO75400 957 aaKnown RBP14.28□□□□□ -0.12
RPA3-202ENST00000396682 EGFP01133 1207 aa14.28□□□□□ -0.12
RPA3-202ENST00000396682 CYP2F1P24903 491 aa14.28□□□□□ -0.12
RPA3-202ENST00000396682 DDX6P26196 483 aaKnown RBP eCLIP14.28□□□□□ -0.12
RPA3-202ENST00000396682 TSPY1Q01534 308 aa14.28□□□□□ -0.12
RPA3-202ENST00000396682 BFSP1Q12934 665 aa14.28□□□□□ -0.12
RPA3-202ENST00000396682 NFE2Q16621 373 aaPredicted RBP14.28□□□□□ -0.12
RPA3-202ENST00000396682 DDR2Q16832 855 aa14.28□□□□□ -0.12
RPA3-202ENST00000396682 PPM1JQ5JR12 505 aa14.28□□□□□ -0.12
RPA3-202ENST00000396682 INTS6LQ5JSJ4 861 aaKnown RBP14.28□□□□□ -0.12
RPA3-202ENST00000396682 CEP68Q76N32 757 aa14.28□□□□□ -0.12
RPA3-202ENST00000396682 MON1AQ86VX9 555 aa14.28□□□□□ -0.12
RPA3-202ENST00000396682 CLIC6Q96NY7 704 aa14.28□□□□□ -0.12
RPA3-202ENST00000396682 ACBD6Q9BR61 282 aa14.28□□□□□ -0.12
RPA3-202ENST00000396682 CBWD1Q9BRT8 395 aa14.28□□□□□ -0.12
RPA3-202ENST00000396682 KIF9Q9HAQ2 790 aa14.28□□□□□ -0.12
RPA3-202ENST00000396682 DDX43Q9NXZ2 648 aaKnown RBP14.28□□□□□ -0.12
RPA3-202ENST00000396682 SEL1LQ9UBV2 794 aa14.28□□□□□ -0.12
RPA3-202ENST00000396682 SIX4Q9UIU6 781 aa14.28□□□□□ -0.12
RPA3-202ENST00000396682 MAGED2Q9UNF1 606 aaPredicted RBP14.28□□□□□ -0.12
RPA3-202ENST00000396682 FRMD3A2A2Y4 597 aa14.27□□□□□ -0.13
RPA3-202ENST00000396682 VPS37CA5D8V6 355 aaPredicted RBP14.27□□□□□ -0.13
RPA3-202ENST00000396682 GOLGA8IPA6NC78 632 aa14.27□□□□□ -0.13
RPA3-202ENST00000396682 GOLGA8JA6NMD2 632 aa14.27□□□□□ -0.13
RPA3-202ENST00000396682 SOBPA7XYQ1 873 aa14.27□□□□□ -0.13
RPA3-202ENST00000396682 RNF40O75150 1001 aa14.27□□□□□ -0.13
RPA3-202ENST00000396682 NOL4O94818 638 aa14.27□□□□□ -0.13
RPA3-202ENST00000396682 GCNT3O95395 438 aa14.27□□□□□ -0.13
RPA3-202ENST00000396682 CSH1P0DML2 217 aa14.27□□□□□ -0.13
RPA3-202ENST00000396682 CSH2P0DML3 217 aa14.27□□□□□ -0.13
RPA3-202ENST00000396682 GAP43P17677 238 aa14.27□□□□□ -0.13
RPA3-202ENST00000396682 GRSF1Q12849 480 aaKnown RBP eCLIP14.27□□□□□ -0.13
RPA3-202ENST00000396682 ZNF268Q14587 947 aaPredicted RBP14.27□□□□□ -0.13
RPA3-202ENST00000396682 RRAGBQ5VZM2 374 aa14.27□□□□□ -0.13
RPA3-202ENST00000396682 FAM173BQ6P4H8 233 aa14.27□□□□□ -0.13
RPA3-202ENST00000396682 KBTBD6Q86V97 674 aa14.27□□□□□ -0.13
RPA3-202ENST00000396682 LRRC52Q8N7C0 313 aa14.27□□□□□ -0.13
RPA3-202ENST00000396682 GAB3Q8WWW8 586 aa14.27□□□□□ -0.13
RPA3-202ENST00000396682 MRPS31Q92665 395 aaKnown RBP14.27□□□□□ -0.13
RPA3-202ENST00000396682 EZH1Q92800 747 aaPredicted RBP14.27□□□□□ -0.13
RPA3-202ENST00000396682 TRMT2BQ96GJ1 504 aaKnown RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms