RNA–Protein interactions for RNA: ENST00000396655.6

NDUFA9-202, Transcript of NADH:ubiquinone oxidoreductase subunit A9, humanhuman

TSL 1 (best)

Gene NDUFA9, Length 1,037 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA9-202ENST00000396655 XYLT2Q9H1B5 865 aa11.89□□□□□ -0.51
NDUFA9-202ENST00000396655 CDH9Q9ULB4 789 aa11.89□□□□□ -0.51
NDUFA9-202ENST00000396655 RIF1Q5UIP0 2472 aaKnown RBP11.89□□□□□ -0.51
NDUFA9-202ENST00000396655 MOSPD3O75425 235 aa11.88□□□□□ -0.51
NDUFA9-202ENST00000396655 NR2F2P24468 414 aa11.88□□□□□ -0.51
NDUFA9-202ENST00000396655 PSMC2P35998 433 aaKnown RBP11.88□□□□□ -0.51
NDUFA9-202ENST00000396655 PPP1R2P41236 205 aa11.88□□□□□ -0.51
NDUFA9-202ENST00000396655 CCR2P41597 374 aa11.88□□□□□ -0.51
NDUFA9-202ENST00000396655 MAGEA11P43364 429 aa11.88□□□□□ -0.51
NDUFA9-202ENST00000396655 RPL10AP62906 217 aaKnown RBP11.88□□□□□ -0.51
NDUFA9-202ENST00000396655 WDR72Q3MJ13 1102 aa11.88□□□□□ -0.51
NDUFA9-202ENST00000396655 MGAT5BQ3V5L5 792 aa11.88□□□□□ -0.51
NDUFA9-202ENST00000396655 ZACNQ401N2 412 aa11.88□□□□□ -0.51
NDUFA9-202ENST00000396655 ZCWPW2Q504Y3 356 aa11.88□□□□□ -0.51
NDUFA9-202ENST00000396655 ZNF658Q5TYW1 1059 aaPredicted RBP11.88□□□□□ -0.51
NDUFA9-202ENST00000396655 ASTLQ6HA08 431 aaPredicted RBP11.88□□□□□ -0.51
NDUFA9-202ENST00000396655 PHLDB3Q6NSJ2 640 aa11.88□□□□□ -0.51
NDUFA9-202ENST00000396655 VSTM1Q6UX27 236 aa11.88□□□□□ -0.51
NDUFA9-202ENST00000396655 C4orf50Q6ZRC1 276 aa11.88□□□□□ -0.51
NDUFA9-202ENST00000396655 KBTBD7Q8WVZ9 684 aa11.88□□□□□ -0.51
NDUFA9-202ENST00000396655 MCRS1Q96EZ8 462 aa11.88□□□□□ -0.51
NDUFA9-202ENST00000396655 SHDQ96IW2 340 aa11.88□□□□□ -0.51
NDUFA9-202ENST00000396655 ASB16Q96NS5 453 aa11.88□□□□□ -0.51
NDUFA9-202ENST00000396655 MKNK1Q9BUB5 465 aa11.88□□□□□ -0.51
NDUFA9-202ENST00000396655 IRF2BPLQ9H1B7 796 aa11.88□□□□□ -0.51
NDUFA9-202ENST00000396655 ZFP14Q9HCL3 533 aa11.88□□□□□ -0.51
NDUFA9-202ENST00000396655 TRPV5Q9NQA5 729 aa11.88□□□□□ -0.51
NDUFA9-202ENST00000396655 FBXL21Q9UKT6 434 aa11.88□□□□□ -0.51
NDUFA9-202ENST00000396655 F5P12259 2224 aa11.87□□□□□ -0.51
NDUFA9-202ENST00000396655 LRRIQ3A6PVS8 624 aaPredicted RBP11.87□□□□□ -0.51
NDUFA9-202ENST00000396655 NARSO43776 548 aaKnown RBP11.87□□□□□ -0.51
NDUFA9-202ENST00000396655 PHACTR2O75167 634 aa11.87□□□□□ -0.51
NDUFA9-202ENST00000396655 P4HA1P13674 534 aa11.87□□□□□ -0.51
NDUFA9-202ENST00000396655 CEBPBP17676 345 aa11.87□□□□□ -0.51
NDUFA9-202ENST00000396655 ATF6P18850 670 aa11.87□□□□□ -0.51
NDUFA9-202ENST00000396655 CDC25CP30307 473 aa11.87□□□□□ -0.51
NDUFA9-202ENST00000396655 GTF2H1P32780 548 aa11.87□□□□□ -0.51
NDUFA9-202ENST00000396655 GNL1P36915 607 aaPredicted RBP11.87□□□□□ -0.51
NDUFA9-202ENST00000396655 CASP4P49662 377 aa11.87□□□□□ -0.51
NDUFA9-202ENST00000396655 MLLT6P55198 1093 aaPredicted RBP11.87□□□□□ -0.51
NDUFA9-202ENST00000396655 TNNC1P63316 161 aa11.87□□□□□ -0.51
NDUFA9-202ENST00000396655 ADAM9Q13443 819 aa11.87□□□□□ -0.51
NDUFA9-202ENST00000396655 PNOCQ13519 176 aa11.87□□□□□ -0.51
NDUFA9-202ENST00000396655 SGSM1Q2NKQ1 1148 aa11.87□□□□□ -0.51
NDUFA9-202ENST00000396655 FAM78AQ5JUQ0 283 aa11.87□□□□□ -0.51
NDUFA9-202ENST00000396655 SCARA3Q6AZY7 606 aa11.87□□□□□ -0.51
NDUFA9-202ENST00000396655 FOXR2Q6PJQ5 311 aa11.87□□□□□ -0.51
NDUFA9-202ENST00000396655 GAREM2Q75VX8 874 aa11.87□□□□□ -0.51
NDUFA9-202ENST00000396655 HS6ST3Q8IZP7 471 aa11.87□□□□□ -0.51
NDUFA9-202ENST00000396655 SHKBP1Q8TBC3 707 aa11.87□□□□□ -0.51
NDUFA9-202ENST00000396655 PLEKHO2Q8TD55 490 aa11.87□□□□□ -0.51
NDUFA9-202ENST00000396655 SMARCE1Q969G3 411 aa11.87□□□□□ -0.51
NDUFA9-202ENST00000396655 TCEAL4Q96EI5 215 aa11.87□□□□□ -0.51
NDUFA9-202ENST00000396655 TRMT2BQ96GJ1 504 aaKnown RBP11.87□□□□□ -0.51
NDUFA9-202ENST00000396655 FAXDC2Q96IV6 333 aa11.87□□□□□ -0.51
NDUFA9-202ENST00000396655 MYRFLQ96LU7 910 aa11.87□□□□□ -0.51
NDUFA9-202ENST00000396655 MMS19Q96T76 1030 aa11.87□□□□□ -0.51
NDUFA9-202ENST00000396655 SEPT5Q99719 369 aaPredicted RBP11.87□□□□□ -0.51
NDUFA9-202ENST00000396655 RPP25Q9BUL9 199 aaKnown RBP11.87□□□□□ -0.51
NDUFA9-202ENST00000396655 MFSD1Q9H3U5 465 aa11.87□□□□□ -0.51
NDUFA9-202ENST00000396655 SMOC2Q9H3U7 446 aa11.87□□□□□ -0.51
NDUFA9-202ENST00000396655 ABI2Q9NYB9 513 aaPredicted RBP11.87□□□□□ -0.51
NDUFA9-202ENST00000396655 CHMP5Q9NZZ3 219 aa11.87□□□□□ -0.51
NDUFA9-202ENST00000396655 GTF3C4Q9UKN8 822 aa11.87□□□□□ -0.51
NDUFA9-202ENST00000396655 PCDHA5Q9Y5H7 936 aa11.87□□□□□ -0.51
NDUFA9-202ENST00000396655 KINO60870 393 aaKnown RBP11.86□□□□□ -0.51
NDUFA9-202ENST00000396655 AKAP3O75969 853 aa11.86□□□□□ -0.51
NDUFA9-202ENST00000396655 CSH1P0DML2 217 aa11.86□□□□□ -0.51
NDUFA9-202ENST00000396655 CSH2P0DML3 217 aa11.86□□□□□ -0.51
NDUFA9-202ENST00000396655 MYL4P12829 197 aa11.86□□□□□ -0.51
NDUFA9-202ENST00000396655 KRT13P13646 458 aa11.86□□□□□ -0.51
NDUFA9-202ENST00000396655 HMGA1P17096 107 aaKnown RBP11.86□□□□□ -0.51
NDUFA9-202ENST00000396655 NPR3P17342 541 aa11.86□□□□□ -0.51
NDUFA9-202ENST00000396655 AOC1P19801 751 aa11.86□□□□□ -0.51
NDUFA9-202ENST00000396655 FCARP24071 287 aa11.86□□□□□ -0.51
NDUFA9-202ENST00000396655 LMO2P25791 158 aa11.86□□□□□ -0.51
NDUFA9-202ENST00000396655 DDX6P26196 483 aaKnown RBP eCLIP11.86□□□□□ -0.51
NDUFA9-202ENST00000396655 VAMP7P51809 220 aa11.86□□□□□ -0.51
NDUFA9-202ENST00000396655 STARD6P59095 220 aa11.86□□□□□ -0.51
NDUFA9-202ENST00000396655 MYL6P60660 151 aa11.86□□□□□ -0.51
NDUFA9-202ENST00000396655 GPC5P78333 572 aa11.86□□□□□ -0.51
NDUFA9-202ENST00000396655 PRKCQQ04759 706 aa11.86□□□□□ -0.51
NDUFA9-202ENST00000396655 LRRC63Q05C16 580 aa11.86□□□□□ -0.51
NDUFA9-202ENST00000396655 PDAP1Q13442 181 aaKnown RBP11.86□□□□□ -0.51
NDUFA9-202ENST00000396655 NCOA4Q13772 614 aa11.86□□□□□ -0.51
NDUFA9-202ENST00000396655 TAF12Q16514 161 aa11.86□□□□□ -0.51
NDUFA9-202ENST00000396655 ARHGAP15Q53QZ3 475 aa11.86□□□□□ -0.51
NDUFA9-202ENST00000396655 TDRD10Q5VZ19 366 aaKnown RBP11.86□□□□□ -0.51
NDUFA9-202ENST00000396655 CEP135Q66GS9 1140 aa11.86□□□□□ -0.51
NDUFA9-202ENST00000396655 TANGO2Q6ICL3 276 aa11.86□□□□□ -0.51
NDUFA9-202ENST00000396655 SV2AQ7L0J3 742 aa11.86□□□□□ -0.51
NDUFA9-202ENST00000396655 OSTM1Q86WC4 334 aa11.86□□□□□ -0.51
NDUFA9-202ENST00000396655 SPATA2LQ8IUW3 424 aaPredicted RBP11.86□□□□□ -0.51
NDUFA9-202ENST00000396655 MFSD6LQ8IWD5 586 aa11.86□□□□□ -0.51
NDUFA9-202ENST00000396655 SIX5Q8N196 739 aa11.86□□□□□ -0.51
NDUFA9-202ENST00000396655 TTC9BQ8N6N2 239 aa11.86□□□□□ -0.51
NDUFA9-202ENST00000396655 MYCBPAPQ8TBZ2 947 aa11.86□□□□□ -0.51
NDUFA9-202ENST00000396655 GPR152Q8TDT2 470 aa11.86□□□□□ -0.51
NDUFA9-202ENST00000396655 DEPDC1BQ8WUY9 529 aa11.86□□□□□ -0.51
NDUFA9-202ENST00000396655 ING5Q8WYH8 240 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms