RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 SIGLEC16A6NMB1 481 aa17.47■□□□□ 0.39
TRIM39-205ENST00000396551 FOXO6A8MYZ6 492 aa17.47■□□□□ 0.39
TRIM39-205ENST00000396551 ZNF286BP0CG31 522 aa17.47■□□□□ 0.39
TRIM39-205ENST00000396551 MCF2P10911 925 aa17.47■□□□□ 0.39
TRIM39-205ENST00000396551 CREB1P16220 341 aa17.47■□□□□ 0.39
TRIM39-205ENST00000396551 SLC25A11Q02978 314 aaKnown RBP17.47■□□□□ 0.39
TRIM39-205ENST00000396551 POU5F1BQ06416 359 aa17.47■□□□□ 0.39
TRIM39-205ENST00000396551 LAMC2Q13753 1193 aa17.47■□□□□ 0.39
TRIM39-205ENST00000396551 EAPPQ56P03 285 aaPredicted RBP17.47■□□□□ 0.39
TRIM39-205ENST00000396551 TFDP3Q5H9I0 405 aa17.47■□□□□ 0.39
TRIM39-205ENST00000396551 USP50Q70EL3 339 aaPredicted RBP17.47■□□□□ 0.39
TRIM39-205ENST00000396551 YTHDF3Q7Z739 585 aaKnown RBP17.47■□□□□ 0.39
TRIM39-205ENST00000396551 ALLCQ8N6M5 410 aa17.47■□□□□ 0.39
TRIM39-205ENST00000396551 BBOF1Q8ND07 529 aa17.47■□□□□ 0.39
TRIM39-205ENST00000396551 STMN4Q9H169 189 aaPredicted RBP17.47■□□□□ 0.39
TRIM39-205ENST00000396551 STRIP2Q9ULQ0 834 aa17.47■□□□□ 0.39
TRIM39-205ENST00000396551 CETPP11597 493 aa17.47■□□□□ 0.39
TRIM39-205ENST00000396551 IL1R2P27930 398 aa17.47■□□□□ 0.39
TRIM39-205ENST00000396551 OASLQ15646 514 aaKnown RBP17.47■□□□□ 0.39
TRIM39-205ENST00000396551 SLC10A6Q3KNW5 377 aa17.47■□□□□ 0.39
TRIM39-205ENST00000396551 INTS9Q9NV88 658 aaKnown RBP17.47■□□□□ 0.39
TRIM39-205ENST00000396551 DDX56Q9NY93 547 aaKnown RBP17.47■□□□□ 0.39
TRIM39-205ENST00000396551 ZNF148Q9UQR1 794 aa17.47■□□□□ 0.39
TRIM39-205ENST00000396551 LRCH4O75427 683 aa17.46■□□□□ 0.39
TRIM39-205ENST00000396551 CPP00450 1065 aa17.46■□□□□ 0.39
TRIM39-205ENST00000396551 ERBB2P04626 1255 aa17.46■□□□□ 0.39
TRIM39-205ENST00000396551 YBX3P16989 372 aaKnown RBP eCLIP17.46■□□□□ 0.39
TRIM39-205ENST00000396551 ARF4P18085 180 aaPredicted RBP17.46■□□□□ 0.39
TRIM39-205ENST00000396551 PSMA2P25787 234 aa17.46■□□□□ 0.39
TRIM39-205ENST00000396551 EPHX2P34913 555 aa17.46■□□□□ 0.39
TRIM39-205ENST00000396551 PSMC4P43686 418 aa17.46■□□□□ 0.39
TRIM39-205ENST00000396551 CNGA2Q16280 664 aa17.46■□□□□ 0.39
TRIM39-205ENST00000396551 LDLRAD1Q5T700 205 aa17.46■□□□□ 0.39
TRIM39-205ENST00000396551 SMYD5Q6GMV2 418 aa17.46■□□□□ 0.39
TRIM39-205ENST00000396551 XYLT1Q86Y38 959 aa17.46■□□□□ 0.39
TRIM39-205ENST00000396551 RELL1Q8IUW5 271 aa17.46■□□□□ 0.39
TRIM39-205ENST00000396551 AFG1LQ8WV93 481 aa17.46■□□□□ 0.39
TRIM39-205ENST00000396551 C9orf72Q96LT7 481 aa17.46■□□□□ 0.39
TRIM39-205ENST00000396551 AKT3Q9Y243 479 aa17.46■□□□□ 0.39
TRIM39-205ENST00000396551 DNALI1O14645 258 aaPredicted RBP17.46■□□□□ 0.39
TRIM39-205ENST00000396551 MED7O43513 233 aa17.46■□□□□ 0.39
TRIM39-205ENST00000396551 CILPO75339 1184 aa17.46■□□□□ 0.39
TRIM39-205ENST00000396551 KIAA0754O94854 1291 aa17.46■□□□□ 0.39
TRIM39-205ENST00000396551 MYCNP04198 464 aaPredicted RBP17.46■□□□□ 0.39
TRIM39-205ENST00000396551 KRT3P12035 628 aa17.46■□□□□ 0.39
TRIM39-205ENST00000396551 PSMC1P62191 440 aaKnown RBP17.46■□□□□ 0.39
TRIM39-205ENST00000396551 PTPN11Q06124 597 aaPredicted RBP17.46■□□□□ 0.39
TRIM39-205ENST00000396551 SNAPC2Q13487 334 aa17.46■□□□□ 0.39
TRIM39-205ENST00000396551 ARMC9Q7Z3E5 817 aa17.46■□□□□ 0.39
TRIM39-205ENST00000396551 MICALL1Q8N3F8 863 aa17.46■□□□□ 0.39
TRIM39-205ENST00000396551 OTUD6BQ8N6M0 293 aa17.46■□□□□ 0.39
TRIM39-205ENST00000396551 EMC1Q8N766 993 aa17.46■□□□□ 0.39
TRIM39-205ENST00000396551 CITO14578 2027 aa17.46■□□□□ 0.39
TRIM39-205ENST00000396551 GH1P01241 217 aa17.45■□□□□ 0.38
TRIM39-205ENST00000396551 ADORA2AP29274 412 aa17.45■□□□□ 0.38
TRIM39-205ENST00000396551 LMNB2Q03252 620 aa17.45■□□□□ 0.38
TRIM39-205ENST00000396551 SMTNL2Q2TAL5 461 aa17.45■□□□□ 0.38
TRIM39-205ENST00000396551 ZCCHC9Q8N567 271 aaKnown RBP17.45■□□□□ 0.38
TRIM39-205ENST00000396551 FBXO41Q8TF61 875 aa17.45■□□□□ 0.38
TRIM39-205ENST00000396551 ZC3H15Q8WU90 426 aaKnown RBP17.45■□□□□ 0.38
TRIM39-205ENST00000396551 ARHGEF2Q92974 986 aaKnown RBP17.45■□□□□ 0.38
TRIM39-205ENST00000396551 PRMT1Q99873 361 aaKnown RBP17.45■□□□□ 0.38
TRIM39-205ENST00000396551 KATNBL1Q9H079 304 aa17.45■□□□□ 0.38
TRIM39-205ENST00000396551 METTL5Q9NRN9 209 aaKnown RBP17.45■□□□□ 0.38
TRIM39-205ENST00000396551 DRG1Q9Y295 367 aaKnown RBP17.45■□□□□ 0.38
TRIM39-205ENST00000396551 TCEA3O75764 348 aa17.45■□□□□ 0.38
TRIM39-205ENST00000396551 MICAL2O94851 1124 aa17.45■□□□□ 0.38
TRIM39-205ENST00000396551 POLR2BP30876 1174 aaKnown RBP17.45■□□□□ 0.38
TRIM39-205ENST00000396551 ADCYAP1R1P41586 468 aa17.45■□□□□ 0.38
TRIM39-205ENST00000396551 VCPP55072 806 aaKnown RBP17.45■□□□□ 0.38
TRIM39-205ENST00000396551 TNFAIP2Q03169 654 aa17.45■□□□□ 0.38
TRIM39-205ENST00000396551 ILDR2Q71H61 639 aa17.45■□□□□ 0.38
TRIM39-205ENST00000396551 TAOK1Q7L7X3 1001 aa17.45■□□□□ 0.38
TRIM39-205ENST00000396551 POLNQ7Z5Q5 900 aa17.45■□□□□ 0.38
TRIM39-205ENST00000396551 CPLX4Q7Z7G2 160 aa17.45■□□□□ 0.38
TRIM39-205ENST00000396551 PACS2Q86VP3 889 aa17.45■□□□□ 0.38
TRIM39-205ENST00000396551 C16orf70Q9BSU1 422 aa17.45■□□□□ 0.38
TRIM39-205ENST00000396551 ZWILCHQ9H900 591 aa17.45■□□□□ 0.38
TRIM39-205ENST00000396551 TRIP11Q15643 1979 aa17.45■□□□□ 0.38
TRIM39-205ENST00000396551 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.45■□□□□ 0.38
TRIM39-205ENST00000396551 ARSEP51690 589 aa17.45■□□□□ 0.38
TRIM39-205ENST00000396551 GSCP56915 257 aaPredicted RBP17.45■□□□□ 0.38
TRIM39-205ENST00000396551 KCNT1Q5JUK3 1230 aa17.45■□□□□ 0.38
TRIM39-205ENST00000396551 VSTM1Q6UX27 236 aa17.45■□□□□ 0.38
TRIM39-205ENST00000396551 CYP4X1Q8N118 509 aa17.45■□□□□ 0.38
TRIM39-205ENST00000396551 PPTC7Q8NI37 304 aa17.45■□□□□ 0.38
TRIM39-205ENST00000396551 L3MBTL3Q96JM7 780 aaPredicted RBP17.45■□□□□ 0.38
TRIM39-205ENST00000396551 CCDC134Q9H6E4 229 aa17.45■□□□□ 0.38
TRIM39-205ENST00000396551 VRTNQ9H8Y1 702 aa17.45■□□□□ 0.38
TRIM39-205ENST00000396551 RBM47A0AV96 593 aaKnown RBP17.44■□□□□ 0.38
TRIM39-205ENST00000396551 MAGEB2O15479 319 aa17.44■□□□□ 0.38
TRIM39-205ENST00000396551 NKD2Q969F2 451 aaPredicted RBP17.44■□□□□ 0.38
TRIM39-205ENST00000396551 TMEM176AQ96HP8 235 aa17.44■□□□□ 0.38
TRIM39-205ENST00000396551 FAXDC2Q96IV6 333 aa17.44■□□□□ 0.38
TRIM39-205ENST00000396551 RBM15Q96T37 977 aaKnown RBP eCLIP17.44■□□□□ 0.385e-6■■□□□ 11.5
TRIM39-205ENST00000396551 ASB7Q9H672 318 aa17.44■□□□□ 0.38
TRIM39-205ENST00000396551 MTHFD1LQ6UB35 978 aa17.44■□□□□ 0.38
TRIM39-205ENST00000396551 LRRC34Q8IZ02 419 aa17.44■□□□□ 0.38
TRIM39-205ENST00000396551 GPRC5AQ8NFJ5 357 aa17.44■□□□□ 0.38
TRIM39-205ENST00000396551 SLC35B2Q8TB61 432 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms