RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 TTC25Q96NG3 672 aa12.18□□□□□ -0.46
PDXDC1-202ENST00000396410 TNFSF13BQ9Y275 285 aa12.18□□□□□ -0.46
PDXDC1-202ENST00000396410 RGPD3A6NKT7 1758 aaPredicted RBP12.18□□□□□ -0.46
PDXDC1-202ENST00000396410 RGPD4Q7Z3J3 1758 aa12.18□□□□□ -0.46
PDXDC1-202ENST00000396410 CDH16O75309 829 aa12.18□□□□□ -0.46
PDXDC1-202ENST00000396410 PTP4A2Q12974 167 aa12.18□□□□□ -0.46
PDXDC1-202ENST00000396410 CATSPER4Q7RTX7 472 aa12.18□□□□□ -0.46
PDXDC1-202ENST00000396410 SESTD1Q86VW0 696 aa12.18□□□□□ -0.46
PDXDC1-202ENST00000396410 MAP7D3Q8IWC1 876 aa12.18□□□□□ -0.46
PDXDC1-202ENST00000396410 C7orf31Q8N865 590 aa12.18□□□□□ -0.46
PDXDC1-202ENST00000396410 TMEM121Q9BTD3 319 aa12.18□□□□□ -0.46
PDXDC1-202ENST00000396410 NINJ2Q9NZG7 142 aa12.18□□□□□ -0.46
PDXDC1-202ENST00000396410 SRRM3A6NNA2 597 aaPredicted RBP12.17□□□□□ -0.46
PDXDC1-202ENST00000396410 COPS2P61201 443 aa12.17□□□□□ -0.46
PDXDC1-202ENST00000396410 RBP5P82980 135 aa12.17□□□□□ -0.46
PDXDC1-202ENST00000396410 PTPN11Q06124 597 aaPredicted RBP12.17□□□□□ -0.46
PDXDC1-202ENST00000396410 SIX1Q15475 284 aaPredicted RBP12.17□□□□□ -0.46
PDXDC1-202ENST00000396410 PYROXD1Q8WU10 500 aa12.17□□□□□ -0.46
PDXDC1-202ENST00000396410 TLCD1Q96CP7 247 aa12.17□□□□□ -0.46
PDXDC1-202ENST00000396410 SMC6Q96SB8 1091 aa12.17□□□□□ -0.46
PDXDC1-202ENST00000396410 RNPEPQ9H4A4 650 aa12.17□□□□□ -0.46
PDXDC1-202ENST00000396410 SLC12A6Q9UHW9 1150 aa12.17□□□□□ -0.46
PDXDC1-202ENST00000396410 ADGRA2Q96PE1 1338 aa12.17□□□□□ -0.46
PDXDC1-202ENST00000396410 LGALS2P05162 132 aa12.17□□□□□ -0.46
PDXDC1-202ENST00000396410 EPHX2P34913 555 aa12.17□□□□□ -0.46
PDXDC1-202ENST00000396410 TMEM62Q0P6H9 643 aa12.17□□□□□ -0.46
PDXDC1-202ENST00000396410 KYAT1Q16773 422 aa12.17□□□□□ -0.46
PDXDC1-202ENST00000396410 PCGF5Q86SE9 256 aa12.17□□□□□ -0.46
PDXDC1-202ENST00000396410 TMEM176AQ96HP8 235 aa12.17□□□□□ -0.46
PDXDC1-202ENST00000396410 NGRNQ9NPE2 291 aaKnown RBP12.17□□□□□ -0.46
PDXDC1-202ENST00000396410 ZNF646O15015 1829 aaPredicted RBP12.17□□□□□ -0.46
PDXDC1-202ENST00000396410 ZSCAN5DPP0CG00 497 aa12.17□□□□□ -0.46
PDXDC1-202ENST00000396410 RFC1P35251 1148 aaPredicted RBP12.17□□□□□ -0.46
PDXDC1-202ENST00000396410 IL9RQ01113 521 aa12.17□□□□□ -0.46
PDXDC1-202ENST00000396410 HHATQ5VTY9 493 aa12.17□□□□□ -0.46
PDXDC1-202ENST00000396410 LRRC34Q8IZ02 419 aa12.17□□□□□ -0.46
PDXDC1-202ENST00000396410 FOXP3Q9BZS1 431 aa12.17□□□□□ -0.46
PDXDC1-202ENST00000396410 SMYD3Q9H7B4 428 aa12.17□□□□□ -0.46
PDXDC1-202ENST00000396410 ACTR5Q9H9F9 607 aaPredicted RBP12.17□□□□□ -0.46
PDXDC1-202ENST00000396410 MCF2P10911 925 aa12.16□□□□□ -0.46
PDXDC1-202ENST00000396410 BBS9Q3SYG4 887 aa12.16□□□□□ -0.46
PDXDC1-202ENST00000396410 PPP1R21Q6ZMI0 780 aa12.16□□□□□ -0.46
PDXDC1-202ENST00000396410 ANKMY2Q8IV38 441 aa12.16□□□□□ -0.46
PDXDC1-202ENST00000396410 OR6B3Q8NGW1 331 aa12.16□□□□□ -0.46
PDXDC1-202ENST00000396410 TFAP2BQ92481 460 aa12.16□□□□□ -0.46
PDXDC1-202ENST00000396410 CTNNAL1Q9UBT7 734 aa12.16□□□□□ -0.46
PDXDC1-202ENST00000396410 LIASO43766 372 aa12.16□□□□□ -0.46
PDXDC1-202ENST00000396410 B4GALT4O60513 344 aa12.16□□□□□ -0.46
PDXDC1-202ENST00000396410 GRAP2O75791 330 aa12.16□□□□□ -0.46
PDXDC1-202ENST00000396410 HOXC6P09630 235 aa12.16□□□□□ -0.46
PDXDC1-202ENST00000396410 RGS7P49802 495 aa12.16□□□□□ -0.46
PDXDC1-202ENST00000396410 CDH6P55285 790 aa12.16□□□□□ -0.46
PDXDC1-202ENST00000396410 CDCA2Q69YH5 1023 aaPredicted RBP12.16□□□□□ -0.46
PDXDC1-202ENST00000396410 DPP3Q9NY33 737 aa12.16□□□□□ -0.46
PDXDC1-202ENST00000396410 TCP11X1B4DZS4 312 aa12.16□□□□□ -0.46
PDXDC1-202ENST00000396410 SUN1O94901 812 aa12.16□□□□□ -0.46
PDXDC1-202ENST00000396410 ETS1P14921 441 aa12.16□□□□□ -0.46
PDXDC1-202ENST00000396410 ARL4CP56559 192 aa12.16□□□□□ -0.46
PDXDC1-202ENST00000396410 ATP11AP98196 1134 aa12.16□□□□□ -0.46
PDXDC1-202ENST00000396410 ERMARDQ5T6L9 678 aa12.16□□□□□ -0.46
PDXDC1-202ENST00000396410 SLCO2A1Q92959 643 aa12.16□□□□□ -0.46
PDXDC1-202ENST00000396410 TXLNGYQ9BZA5 131 aa12.16□□□□□ -0.46
PDXDC1-202ENST00000396410 PDGFRAP16234 1089 aa12.16□□□□□ -0.46
PDXDC1-202ENST00000396410 ADORA2AP29274 412 aa12.16□□□□□ -0.46
PDXDC1-202ENST00000396410 MMP13P45452 471 aa12.16□□□□□ -0.46
PDXDC1-202ENST00000396410 EIF3EP60228 445 aaKnown RBP12.16□□□□□ -0.46
PDXDC1-202ENST00000396410 OTUD4Q01804 1114 aaKnown RBP12.16□□□□□ -0.46
PDXDC1-202ENST00000396410 HIF1AQ16665 826 aa12.16□□□□□ -0.46
PDXDC1-202ENST00000396410 EMC10Q5UCC4 262 aa12.16□□□□□ -0.46
PDXDC1-202ENST00000396410 LRRC38Q5VT99 294 aa12.16□□□□□ -0.46
PDXDC1-202ENST00000396410 OR6J1Q8NGC5 347 aa12.16□□□□□ -0.46
PDXDC1-202ENST00000396410 SNX9Q9Y5X1 595 aa12.16□□□□□ -0.46
PDXDC1-202ENST00000396410 DNALI1O14645 258 aaPredicted RBP12.15□□□□□ -0.46
PDXDC1-202ENST00000396410 LGR5O75473 907 aa12.15□□□□□ -0.46
PDXDC1-202ENST00000396410 PAEPP09466 180 aa12.15□□□□□ -0.46
PDXDC1-202ENST00000396410 TCF4P15884 667 aa12.15□□□□□ -0.46
PDXDC1-202ENST00000396410 ADCYAP1R1P41586 468 aa12.15□□□□□ -0.46
PDXDC1-202ENST00000396410 VCPP55072 806 aaKnown RBP12.15□□□□□ -0.46
PDXDC1-202ENST00000396410 MBTD1Q05BQ5 628 aa12.15□□□□□ -0.46
PDXDC1-202ENST00000396410 FBXW10Q5XX13 1052 aa12.15□□□□□ -0.46
PDXDC1-202ENST00000396410 ZC3H18Q86VM9 953 aaKnown RBP12.15□□□□□ -0.46
PDXDC1-202ENST00000396410 PDIK1LQ8N165 341 aa12.15□□□□□ -0.46
PDXDC1-202ENST00000396410 NT5C1AQ9BXI3 368 aa12.15□□□□□ -0.46
PDXDC1-202ENST00000396410 FHDC1Q9C0D6 1143 aaPredicted RBP12.15□□□□□ -0.46
PDXDC1-202ENST00000396410 FZD8Q9H461 694 aa12.15□□□□□ -0.46
PDXDC1-202ENST00000396410 SLC5A4Q9NY91 659 aa12.15□□□□□ -0.46
PDXDC1-202ENST00000396410 H3BRB1 525 aa12.15□□□□□ -0.46
PDXDC1-202ENST00000396410 ASPAP45381 313 aa12.15□□□□□ -0.46
PDXDC1-202ENST00000396410 QPCTQ16769 361 aa12.15□□□□□ -0.46
PDXDC1-202ENST00000396410 PTPN20Q4JDL3 420 aa12.15□□□□□ -0.46
PDXDC1-202ENST00000396410 FAM133BQ5BKY9 247 aaKnown RBP12.15□□□□□ -0.46
PDXDC1-202ENST00000396410 TMEM192Q8IY95 271 aa12.15□□□□□ -0.46
PDXDC1-202ENST00000396410 CENPTQ96BT3 561 aa12.15□□□□□ -0.46
PDXDC1-202ENST00000396410 ADAM33Q9BZ11 813 aa12.15□□□□□ -0.46
PDXDC1-202ENST00000396410 TUT1Q9H6E5 874 aaKnown RBP12.15□□□□□ -0.46
PDXDC1-202ENST00000396410 SAE1Q9UBE0 346 aaPredicted RBP12.15□□□□□ -0.46
PDXDC1-202ENST00000396410 SPAG7O75391 227 aa12.15□□□□□ -0.46
PDXDC1-202ENST00000396410 MICAL2O94851 1124 aa12.15□□□□□ -0.46
PDXDC1-202ENST00000396410 VDRP11473 427 aa12.15□□□□□ -0.46
PDXDC1-202ENST00000396410 ATICP31939 592 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms