RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 SLFN14P0C7P3 912 aa19.65■□□□□ 0.74
FXN-203ENST00000396366 DLATP10515 647 aaKnown RBP19.65■□□□□ 0.74
FXN-203ENST00000396366 HMGA1P17096 107 aaKnown RBP19.65■□□□□ 0.74
FXN-203ENST00000396366 LMO2P25791 158 aa19.65■□□□□ 0.74
FXN-203ENST00000396366 SMARCB1Q12824 385 aa19.65■□□□□ 0.74
FXN-203ENST00000396366 SURF1Q15526 300 aa19.65■□□□□ 0.74
FXN-203ENST00000396366 TAF12Q16514 161 aa19.65■□□□□ 0.74
FXN-203ENST00000396366 DDR2Q16832 855 aa19.65■□□□□ 0.74
FXN-203ENST00000396366 INTS6LQ5JSJ4 861 aaKnown RBP19.65■□□□□ 0.74
FXN-203ENST00000396366 TRAPPC11Q7Z392 1133 aa19.65■□□□□ 0.74
FXN-203ENST00000396366 TMEM150AQ86TG1 271 aa19.65■□□□□ 0.74
FXN-203ENST00000396366 WDR49Q8IV35 697 aa19.65■□□□□ 0.74
FXN-203ENST00000396366 CEP57L1Q8IYX8 460 aa19.65■□□□□ 0.74
FXN-203ENST00000396366 ADGRF2Q8IZF7 708 aa19.65■□□□□ 0.74
FXN-203ENST00000396366 ZNF687Q8N1G0 1237 aa19.65■□□□□ 0.74
FXN-203ENST00000396366 TOP6BLQ8N6T0 577 aa19.65■□□□□ 0.74
FXN-203ENST00000396366 TTC8Q8TAM2 541 aa19.65■□□□□ 0.74
FXN-203ENST00000396366 DEPDC1BQ8WUY9 529 aa19.65■□□□□ 0.74
FXN-203ENST00000396366 LEO1Q8WVC0 666 aaPredicted RBP19.65■□□□□ 0.74
FXN-203ENST00000396366 ZNF516Q92618 1163 aa19.65■□□□□ 0.74
FXN-203ENST00000396366 ZFYVE19Q96K21 471 aa19.65■□□□□ 0.74
FXN-203ENST00000396366 SLC46A2Q9BY10 475 aa19.65■□□□□ 0.74
FXN-203ENST00000396366 OSBPL6Q9BZF3 934 aa19.65■□□□□ 0.74
FXN-203ENST00000396366 KIAA1586Q9HCI6 787 aa19.65■□□□□ 0.74
FXN-203ENST00000396366 NDRG2Q9UN36 371 aaKnown RBP19.65■□□□□ 0.74
FXN-203ENST00000396366 RIF1Q5UIP0 2472 aaKnown RBP19.65■□□□□ 0.74
FXN-203ENST00000396366 F5P12259 2224 aa19.64■□□□□ 0.74
FXN-203ENST00000396366 FGF19O95750 216 aa19.64■□□□□ 0.73
FXN-203ENST00000396366 PFKFB1P16118 471 aa19.64■□□□□ 0.73
FXN-203ENST00000396366 MYL7Q01449 175 aa19.64■□□□□ 0.73
FXN-203ENST00000396366 CYP24A1Q07973 514 aa19.64■□□□□ 0.73
FXN-203ENST00000396366 MYO1EQ12965 1108 aa19.64■□□□□ 0.73
FXN-203ENST00000396366 STK4Q13043 487 aa19.64■□□□□ 0.73
FXN-203ENST00000396366 BMT2Q1RMZ1 405 aa19.64■□□□□ 0.73
FXN-203ENST00000396366 LIMS2Q7Z4I7 341 aa19.64■□□□□ 0.73
FXN-203ENST00000396366 YAF2Q8IY57 180 aa19.64■□□□□ 0.73
FXN-203ENST00000396366 XXYLT1Q8NBI6 393 aa19.64■□□□□ 0.73
FXN-203ENST00000396366 KBTBD7Q8WVZ9 684 aa19.64■□□□□ 0.73
FXN-203ENST00000396366 CLDN23Q96B33 292 aa19.64■□□□□ 0.73
FXN-203ENST00000396366 NELL2Q99435 816 aa19.64■□□□□ 0.73
FXN-203ENST00000396366 TASP1Q9H6P5 420 aa19.64■□□□□ 0.73
FXN-203ENST00000396366 TRPV5Q9NQA5 729 aa19.64■□□□□ 0.73
FXN-203ENST00000396366 MAGED2Q9UNF1 606 aaPredicted RBP19.64■□□□□ 0.73
FXN-203ENST00000396366 PIAS3Q9Y6X2 628 aa19.64■□□□□ 0.73
FXN-203ENST00000396366 UBE4BO95155 1302 aa19.64■□□□□ 0.73
FXN-203ENST00000396366 PATJQ8NI35 1801 aa19.64■□□□□ 0.73
FXN-203ENST00000396366 NUP210Q8TEM1 1887 aaPredicted RBP19.63■□□□□ 0.73
FXN-203ENST00000396366 TNNI1P19237 187 aa19.63■□□□□ 0.73
FXN-203ENST00000396366 CMA1P23946 247 aa19.63■□□□□ 0.73
FXN-203ENST00000396366 SOX9P48436 509 aa19.63■□□□□ 0.73
FXN-203ENST00000396366 PSMC1P62191 440 aaKnown RBP19.63■□□□□ 0.73
FXN-203ENST00000396366 FCHO2Q0JRZ9 810 aa19.63■□□□□ 0.73
FXN-203ENST00000396366 PSMD6Q15008 389 aa19.63■□□□□ 0.73
FXN-203ENST00000396366 NFE2Q16621 373 aaPredicted RBP19.63■□□□□ 0.73
FXN-203ENST00000396366 KNOP1Q1ED39 458 aaKnown RBP19.63■□□□□ 0.73
FXN-203ENST00000396366 KMT5BQ4FZB7 885 aa19.63■□□□□ 0.73
FXN-203ENST00000396366 ARHGAP15Q53QZ3 475 aa19.63■□□□□ 0.73
FXN-203ENST00000396366 HS2ST1Q7LGA3 356 aa19.63■□□□□ 0.73
FXN-203ENST00000396366 E2F7Q96AV8 911 aa19.63■□□□□ 0.73
FXN-203ENST00000396366 SPATA32Q96LK8 384 aa19.63■□□□□ 0.73
FXN-203ENST00000396366 CGRRF1Q99675 332 aa19.63■□□□□ 0.73
FXN-203ENST00000396366 R3HCC1Q9Y3T6 440 aaKnown RBP19.63■□□□□ 0.73
FXN-203ENST00000396366 PTPRZ1P23471 2315 aaPredicted RBP19.63■□□□□ 0.73
FXN-203ENST00000396366 DENND4CQ5VZ89 1909 aa19.63■□□□□ 0.73
FXN-203ENST00000396366 FRYLO94915 3013 aa19.62■□□□□ 0.73
FXN-203ENST00000396366 SLC38A8A6NNN8 435 aa19.62■□□□□ 0.73
FXN-203ENST00000396366 CHADO15335 359 aa19.62■□□□□ 0.73
FXN-203ENST00000396366 F11P03951 625 aa19.62■□□□□ 0.73
FXN-203ENST00000396366 PDGFRBP09619 1106 aa19.62■□□□□ 0.73
FXN-203ENST00000396366 CCNE1P24864 410 aa19.62■□□□□ 0.73
FXN-203ENST00000396366 CDC25CP30307 473 aa19.62■□□□□ 0.73
FXN-203ENST00000396366 LHX1P48742 406 aa19.62■□□□□ 0.73
FXN-203ENST00000396366 CASP4P49662 377 aa19.62■□□□□ 0.73
FXN-203ENST00000396366 NLRP12P59046 1061 aa19.62■□□□□ 0.73
FXN-203ENST00000396366 KIAA0895Q8NCT3 520 aa19.62■□□□□ 0.73
FXN-203ENST00000396366 PLEKHO2Q8TD55 490 aa19.62■□□□□ 0.73
FXN-203ENST00000396366 FAM3CQ92520 227 aa19.62■□□□□ 0.73
FXN-203ENST00000396366 FNBP1Q96RU3 617 aa19.62■□□□□ 0.73
FXN-203ENST00000396366 CRTAC1Q9NQ79 661 aa19.62■□□□□ 0.73
FXN-203ENST00000396366 HPSEQ9Y251 543 aa19.62■□□□□ 0.73
FXN-203ENST00000396366 MRPS17Q9Y2R5 130 aaKnown RBP19.62■□□□□ 0.73
FXN-203ENST00000396366 NME7Q9Y5B8 376 aa19.62■□□□□ 0.73
FXN-203ENST00000396366 OBSL1O75147 1896 aa19.62■□□□□ 0.73
FXN-203ENST00000396366 MAN2B1O00754 1011 aa19.61■□□□□ 0.73
FXN-203ENST00000396366 DPYSL4O14531 572 aa19.61■□□□□ 0.73
FXN-203ENST00000396366 SNRPFP62306 86 aaKnown RBP19.61■□□□□ 0.73
FXN-203ENST00000396366 CSTF1Q05048 431 aaKnown RBP19.61■□□□□ 0.73
FXN-203ENST00000396366 MTAPQ13126 283 aa19.61■□□□□ 0.73
FXN-203ENST00000396366 TXNDC8Q6A555 127 aa19.61■□□□□ 0.73
FXN-203ENST00000396366 FAM171BQ6P995 826 aa19.61■□□□□ 0.73
FXN-203ENST00000396366 TSSK4Q6SA08 328 aa19.61■□□□□ 0.73
FXN-203ENST00000396366 DPH6Q7L8W6 267 aa19.61■□□□□ 0.73
FXN-203ENST00000396366 SPATA2LQ8IUW3 424 aaPredicted RBP19.61■□□□□ 0.73
FXN-203ENST00000396366 C12orf56Q8IXR9 622 aa19.61■□□□□ 0.73
FXN-203ENST00000396366 MAB21L3Q8N8X9 362 aa19.61■□□□□ 0.73
FXN-203ENST00000396366 CSGALNACT1Q8TDX6 532 aa19.61■□□□□ 0.73
FXN-203ENST00000396366 GCNAQ96QF7 691 aa19.61■□□□□ 0.73
FXN-203ENST00000396366 MMS19Q96T76 1030 aa19.61■□□□□ 0.73
FXN-203ENST00000396366 SYT15Q9BQS2 421 aa19.61■□□□□ 0.73
FXN-203ENST00000396366 MRPL45Q9BRJ2 306 aaKnown RBP19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms