RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 SRGAP2CP0DJJ0 459 aa8.82□□□□□ -1
NDE1-202ENST00000396355 SRGAP2BP0DMP2 458 aa8.82□□□□□ -1
NDE1-202ENST00000396355 STIP1P31948 543 aaKnown RBP8.82□□□□□ -1
NDE1-202ENST00000396355 ST13P50502 369 aaKnown RBP8.82□□□□□ -1
NDE1-202ENST00000396355 NKX2-5P52952 324 aaPredicted RBP8.82□□□□□ -1
NDE1-202ENST00000396355 HIC1Q14526 733 aa8.82□□□□□ -1
NDE1-202ENST00000396355 GRM4Q14833 912 aa8.82□□□□□ -1
NDE1-202ENST00000396355 SGSM1Q2NKQ1 1148 aa8.82□□□□□ -1
NDE1-202ENST00000396355 SPATA31D4Q6ZUB0 917 aa8.82□□□□□ -1
NDE1-202ENST00000396355 RSPH3Q86UC2 560 aa8.82□□□□□ -1
NDE1-202ENST00000396355 LRRC6Q86X45 466 aa8.82□□□□□ -1
NDE1-202ENST00000396355 TBC1D16Q8TBP0 767 aa8.82□□□□□ -1
NDE1-202ENST00000396355 DPF3Q92784 378 aa8.82□□□□□ -1
NDE1-202ENST00000396355 FBXL8Q96CD0 374 aa8.82□□□□□ -1
NDE1-202ENST00000396355 NSL1Q96IY1 281 aa8.82□□□□□ -1
NDE1-202ENST00000396355 SPC25Q9HBM1 224 aa8.82□□□□□ -1
NDE1-202ENST00000396355 RABGEF1Q9UJ41 708 aa8.82□□□□□ -1
NDE1-202ENST00000396355 LRRC42Q9Y546 428 aa8.82□□□□□ -1
NDE1-202ENST00000396355 EXOC3O60645 756 aa8.81□□□□□ -1
NDE1-202ENST00000396355 FKTNO75072 461 aa8.81□□□□□ -1
NDE1-202ENST00000396355 TBX10O75333 385 aa8.81□□□□□ -1
NDE1-202ENST00000396355 KRT3P12035 628 aa8.81□□□□□ -1
NDE1-202ENST00000396355 ATP2B4P23634 1241 aa8.81□□□□□ -1
NDE1-202ENST00000396355 NAPAP54920 295 aa8.81□□□□□ -1
NDE1-202ENST00000396355 TRAF2Q12933 501 aa8.81□□□□□ -1
NDE1-202ENST00000396355 PDAP1Q13442 181 aaKnown RBP8.81□□□□□ -1
NDE1-202ENST00000396355 ARHGAP44Q17R89 818 aa8.81□□□□□ -1
NDE1-202ENST00000396355 LETM2Q2VYF4 491 aa8.81□□□□□ -1
NDE1-202ENST00000396355 DTHD1Q6ZMT9 781 aa8.81□□□□□ -1
NDE1-202ENST00000396355 CDH24Q86UP0 819 aa8.81□□□□□ -1
NDE1-202ENST00000396355 USP38Q8NB14 1042 aa8.81□□□□□ -1
NDE1-202ENST00000396355 PMEPA1Q969W9 287 aa8.81□□□□□ -1
NDE1-202ENST00000396355 MTMR8Q96EF0 704 aa8.81□□□□□ -1
NDE1-202ENST00000396355 WNK4Q96J92 1243 aa8.81□□□□□ -1
NDE1-202ENST00000396355 PBKQ96KB5 322 aa8.81□□□□□ -1
NDE1-202ENST00000396355 NRDE2Q9H7Z3 1164 aa8.81□□□□□ -1
NDE1-202ENST00000396355 KBTBD4Q9NVX7 518 aa8.81□□□□□ -1
NDE1-202ENST00000396355 CIDEBQ9UHD4 219 aa8.81□□□□□ -1
NDE1-202ENST00000396355 BAIAP3O94812 1187 aa8.81□□□□□ -1
NDE1-202ENST00000396355 GH1P01241 217 aa8.81□□□□□ -1
NDE1-202ENST00000396355 STMN1P16949 149 aa8.81□□□□□ -1
NDE1-202ENST00000396355 PTGS2P35354 604 aa8.81□□□□□ -1
NDE1-202ENST00000396355 RPL5P46777 297 aaKnown RBP8.81□□□□□ -1
NDE1-202ENST00000396355 ENTPD1P49961 510 aa8.81□□□□□ -1
NDE1-202ENST00000396355 RGS21Q2M5E4 152 aa8.81□□□□□ -1
NDE1-202ENST00000396355 TTI2Q6NXR4 508 aa8.81□□□□□ -1
NDE1-202ENST00000396355 NEK5Q6P3R8 708 aa8.81□□□□□ -1
NDE1-202ENST00000396355 DGKHQ86XP1 1220 aa8.81□□□□□ -1
NDE1-202ENST00000396355 GDPD5Q8WTR4 605 aa8.81□□□□□ -1
NDE1-202ENST00000396355 ECSITQ9BQ95 431 aa8.81□□□□□ -1
NDE1-202ENST00000396355 TTYH3Q9C0H2 523 aa8.81□□□□□ -1
NDE1-202ENST00000396355 CCDC90BQ9GZT6 254 aa8.81□□□□□ -1
NDE1-202ENST00000396355 MYOZ2Q9NPC6 264 aa8.81□□□□□ -1
NDE1-202ENST00000396355 KRT82Q9NSB4 513 aa8.81□□□□□ -1
NDE1-202ENST00000396355 BARHL2Q9NY43 387 aa8.81□□□□□ -1
NDE1-202ENST00000396355 CAPN11Q9UMQ6 739 aa8.81□□□□□ -1
NDE1-202ENST00000396355 SLC12A4Q9UP95 1085 aa8.81□□□□□ -1
NDE1-202ENST00000396355 TRIOBPQ9H2D6 2365 aa8.81□□□□□ -1
NDE1-202ENST00000396355 ARPC4-TTLL3A0A0A6YYG9 625 aa8.81□□□□□ -1
NDE1-202ENST00000396355 MYOCOSA0A1B0GUC4 107 aa8.81□□□□□ -1
NDE1-202ENST00000396355 SMIM31A0A1B0GVY4 71 aa8.81□□□□□ -1
NDE1-202ENST00000396355 CCDC130P13994 396 aa8.81□□□□□ -1
NDE1-202ENST00000396355 RASA1P20936 1047 aa8.81□□□□□ -1
NDE1-202ENST00000396355 AMPD3Q01432 767 aa8.81□□□□□ -1
NDE1-202ENST00000396355 PCSK7Q16549 785 aa8.81□□□□□ -1
NDE1-202ENST00000396355 PDCD4Q53EL6 469 aaKnown RBP8.81□□□□□ -1
NDE1-202ENST00000396355 CEP78Q5JTW2 689 aa8.81□□□□□ -1
NDE1-202ENST00000396355 ZNF618Q5T7W0 954 aa8.81□□□□□ -1
NDE1-202ENST00000396355 MAPKAPK5Q8IW41 473 aa8.81□□□□□ -1
NDE1-202ENST00000396355 TGFBRAP1Q8WUH2 860 aa8.81□□□□□ -1
NDE1-202ENST00000396355 ANKS1AQ92625 1134 aa8.81□□□□□ -1
NDE1-202ENST00000396355 CALML4Q96GE6 196 aa8.81□□□□□ -1
NDE1-202ENST00000396355 CLPTM1LQ96KA5 538 aa8.81□□□□□ -1
NDE1-202ENST00000396355 TMEM47Q9BQJ4 181 aa8.81□□□□□ -1
NDE1-202ENST00000396355 BBS2Q9BXC9 721 aa8.81□□□□□ -1
NDE1-202ENST00000396355 TRPV6Q9H1D0 765 aa8.81□□□□□ -1
NDE1-202ENST00000396355 EBF3Q9H4W6 596 aa8.81□□□□□ -1
NDE1-202ENST00000396355 EXOC7Q9UPT5 735 aa8.81□□□□□ -1
NDE1-202ENST00000396355 SNTNA6NMZ2 147 aa8.8□□□□□ -1
NDE1-202ENST00000396355 PENKP01210 267 aaPredicted RBP8.8□□□□□ -1
NDE1-202ENST00000396355 AFPP02771 609 aaKnown RBP8.8□□□□□ -1
NDE1-202ENST00000396355 PLS3P13797 630 aa8.8□□□□□ -1
NDE1-202ENST00000396355 PORP16435 677 aaPredicted RBP8.8□□□□□ -1
NDE1-202ENST00000396355 TNFAIP3P21580 790 aa8.8□□□□□ -1
NDE1-202ENST00000396355 ZNF76P36508 570 aa8.8□□□□□ -1
NDE1-202ENST00000396355 PRKCIP41743 596 aa8.8□□□□□ -1
NDE1-202ENST00000396355 NSUN2Q08J23 767 aaKnown RBP eCLIP8.8□□□□□ -1
NDE1-202ENST00000396355 LSAMPQ13449 338 aa8.8□□□□□ -1
NDE1-202ENST00000396355 STK11Q15831 433 aa8.8□□□□□ -1
NDE1-202ENST00000396355 PUS10Q3MIT2 529 aaKnown RBP8.8□□□□□ -1
NDE1-202ENST00000396355 SUPT20HL1Q3ZLR7 823 aa8.8□□□□□ -1
NDE1-202ENST00000396355 NXNQ6DKJ4 435 aa8.8□□□□□ -1
NDE1-202ENST00000396355 RSBN1LQ6PCB5 846 aaPredicted RBP8.8□□□□□ -1
NDE1-202ENST00000396355 PRR23BQ6ZRT6 265 aa8.8□□□□□ -1
NDE1-202ENST00000396355 UBL4BQ8N7F7 174 aa8.8□□□□□ -1
NDE1-202ENST00000396355 TLR10Q9BXR5 811 aa8.8□□□□□ -1
NDE1-202ENST00000396355 USP40Q9NVE5 1235 aa8.8□□□□□ -1
NDE1-202ENST00000396355 POLLQ9UGP5 575 aa8.8□□□□□ -1
NDE1-202ENST00000396355 GMEB1Q9Y692 573 aa8.8□□□□□ -1
NDE1-202ENST00000396355 FOCADQ5VW36 1801 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms