RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 KRT10P13645 584 aa17.71■□□□□ 0.43
NUP50-202ENST00000396096 P4HA1P13674 534 aa17.71■□□□□ 0.43
NUP50-202ENST00000396096 RFC1P35251 1148 aaPredicted RBP17.71■□□□□ 0.43
NUP50-202ENST00000396096 MAGEA9P43362 315 aa17.71■□□□□ 0.43
NUP50-202ENST00000396096 GABRB2P47870 512 aa17.71■□□□□ 0.43
NUP50-202ENST00000396096 GCLCP48506 637 aaPredicted RBP17.71■□□□□ 0.43
NUP50-202ENST00000396096 CDH8P55286 799 aa17.71■□□□□ 0.43
NUP50-202ENST00000396096 SLC25A11Q02978 314 aaKnown RBP17.71■□□□□ 0.43
NUP50-202ENST00000396096 YTHDF3Q7Z739 585 aaKnown RBP17.71■□□□□ 0.43
NUP50-202ENST00000396096 ALLCQ8N6M5 410 aa17.71■□□□□ 0.43
NUP50-202ENST00000396096 NKD2Q969F2 451 aaPredicted RBP17.71■□□□□ 0.43
NUP50-202ENST00000396096 TMEM176AQ96HP8 235 aa17.71■□□□□ 0.43
NUP50-202ENST00000396096 MS4A4AQ96JQ5 239 aa17.71■□□□□ 0.43
NUP50-202ENST00000396096 ELOVL4Q9GZR5 314 aa17.71■□□□□ 0.43
NUP50-202ENST00000396096 C2CD2Q9Y426 696 aa17.71■□□□□ 0.43
NUP50-202ENST00000396096 RALGAPA2Q2PPJ7 1873 aa17.71■□□□□ 0.43
NUP50-202ENST00000396096 CITO14578 2027 aa17.71■□□□□ 0.43
NUP50-202ENST00000396096 C3orf70A6NLC5 250 aaPredicted RBP17.71■□□□□ 0.43
NUP50-202ENST00000396096 TRIM66O15016 1216 aa17.71■□□□□ 0.43
NUP50-202ENST00000396096 SNAI1O95863 264 aaPredicted RBP17.71■□□□□ 0.43
NUP50-202ENST00000396096 ADCYAP1R1P41586 468 aa17.71■□□□□ 0.43
NUP50-202ENST00000396096 TAZQ16635 292 aa17.71■□□□□ 0.43
NUP50-202ENST00000396096 TXNRD3NBQ6F5E7 133 aa17.71■□□□□ 0.43
NUP50-202ENST00000396096 XYLT1Q86Y38 959 aa17.71■□□□□ 0.43
NUP50-202ENST00000396096 ZCCHC9Q8N567 271 aaKnown RBP17.71■□□□□ 0.43
NUP50-202ENST00000396096 TTC39CQ8N584 583 aa17.71■□□□□ 0.43
NUP50-202ENST00000396096 UHMK1Q8TAS1 419 aaKnown RBP17.71■□□□□ 0.43
NUP50-202ENST00000396096 IPO4Q8TEX9 1081 aaKnown RBP17.71■□□□□ 0.43
NUP50-202ENST00000396096 CPB2Q96IY4 423 aa17.71■□□□□ 0.43
NUP50-202ENST00000396096 TWNKQ96RR1 684 aa17.71■□□□□ 0.43
NUP50-202ENST00000396096 FAM118BQ9BPY3 351 aa17.71■□□□□ 0.43
NUP50-202ENST00000396096 NINJ2Q9NZG7 142 aa17.71■□□□□ 0.43
NUP50-202ENST00000396096 ITGA11Q9UKX5 1188 aa17.71■□□□□ 0.43
NUP50-202ENST00000396096 DNPEPQ9ULA0 475 aa17.71■□□□□ 0.43
NUP50-202ENST00000396096 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.71■□□□□ 0.43
NUP50-202ENST00000396096 A0A087WUV0 522 aaPredicted RBP17.7■□□□□ 0.42
NUP50-202ENST00000396096 A0A1B0GUA9 196 aa17.7■□□□□ 0.42
NUP50-202ENST00000396096 H3BRB1 525 aa17.7■□□□□ 0.42
NUP50-202ENST00000396096 TSPAN1O60635 241 aa17.7■□□□□ 0.42
NUP50-202ENST00000396096 VTNP04004 478 aa17.7■□□□□ 0.42
NUP50-202ENST00000396096 KRT7P08729 469 aa17.7■□□□□ 0.42
NUP50-202ENST00000396096 ZNF286BP0CG31 522 aa17.7■□□□□ 0.42
NUP50-202ENST00000396096 VDRP11473 427 aa17.7■□□□□ 0.42
NUP50-202ENST00000396096 CHN1P15882 459 aa17.7■□□□□ 0.42
NUP50-202ENST00000396096 ATF7P17544 494 aaPredicted RBP17.7■□□□□ 0.42
NUP50-202ENST00000396096 PSMA2P25787 234 aa17.7■□□□□ 0.42
NUP50-202ENST00000396096 VCPP55072 806 aaKnown RBP17.7■□□□□ 0.42
NUP50-202ENST00000396096 PSMC1P62191 440 aaKnown RBP17.7■□□□□ 0.42
NUP50-202ENST00000396096 INCA1Q0VD86 236 aa17.7■□□□□ 0.42
NUP50-202ENST00000396096 TMEM132DQ14C87 1099 aa17.7■□□□□ 0.42
NUP50-202ENST00000396096 OASLQ15646 514 aaKnown RBP17.7■□□□□ 0.42
NUP50-202ENST00000396096 CNGA2Q16280 664 aa17.7■□□□□ 0.42
NUP50-202ENST00000396096 KAZNQ674X7 775 aa17.7■□□□□ 0.42
NUP50-202ENST00000396096 TAOK1Q7L7X3 1001 aa17.7■□□□□ 0.42
NUP50-202ENST00000396096 ANKRD23Q86SG2 305 aa17.7■□□□□ 0.42
NUP50-202ENST00000396096 ZNF410Q86VK4 478 aa17.7■□□□□ 0.42
NUP50-202ENST00000396096 JOSD2Q8TAC2 188 aa17.7■□□□□ 0.42
NUP50-202ENST00000396096 MDM1Q8TC05 714 aa17.7■□□□□ 0.42
NUP50-202ENST00000396096 ATXN2LQ8WWM7 1075 aaKnown RBP17.7■□□□□ 0.42
NUP50-202ENST00000396096 MCRS1Q96EZ8 462 aa17.7■□□□□ 0.42
NUP50-202ENST00000396096 CPXM1Q96SM3 734 aa17.7■□□□□ 0.42
NUP50-202ENST00000396096 FRMD8P1Q9BZ68 369 aaPredicted RBP17.7■□□□□ 0.42
NUP50-202ENST00000396096 CCDC134Q9H6E4 229 aa17.7■□□□□ 0.42
NUP50-202ENST00000396096 TUT1Q9H6E5 874 aaKnown RBP17.7■□□□□ 0.42
NUP50-202ENST00000396096 LRRD1A4D1F6 860 aa17.69■□□□□ 0.42
NUP50-202ENST00000396096 SMIM23A6NLE4 172 aa17.69■□□□□ 0.42
NUP50-202ENST00000396096 BTBD19C9JJ37 291 aa17.69■□□□□ 0.42
NUP50-202ENST00000396096 DNALI1O14645 258 aaPredicted RBP17.69■□□□□ 0.42
NUP50-202ENST00000396096 NDC80O14777 642 aa17.69■□□□□ 0.42
NUP50-202ENST00000396096 CSDE1O75534 798 aaKnown RBP17.69■□□□□ 0.42
NUP50-202ENST00000396096 MICAL2O94851 1124 aa17.69■□□□□ 0.42
NUP50-202ENST00000396096 ACSL3O95573 720 aa17.69■□□□□ 0.42
NUP50-202ENST00000396096 HMGCRP04035 888 aa17.69■□□□□ 0.42
NUP50-202ENST00000396096 ITGAVP06756 1048 aa17.69■□□□□ 0.42
NUP50-202ENST00000396096 VPS41P49754 854 aa17.69■□□□□ 0.42
NUP50-202ENST00000396096 GTF2A2P52657 109 aa17.69■□□□□ 0.42
NUP50-202ENST00000396096 ACAP1Q15027 740 aa17.69■□□□□ 0.42
NUP50-202ENST00000396096 ZFYVE27Q5T4F4 411 aa17.69■□□□□ 0.42
NUP50-202ENST00000396096 GSTA5Q7RTV2 222 aa17.69■□□□□ 0.42
NUP50-202ENST00000396096 C10orf67Q8IYJ2 551 aa17.69■□□□□ 0.42
NUP50-202ENST00000396096 ARFGAP1Q8N6T3 406 aa17.69■□□□□ 0.42
NUP50-202ENST00000396096 HPDLQ96IR7 371 aa17.69■□□□□ 0.42
NUP50-202ENST00000396096 RASSF4Q9H2L5 321 aa17.69■□□□□ 0.42
NUP50-202ENST00000396096 TJP2Q9UDY2 1190 aa17.69■□□□□ 0.42
NUP50-202ENST00000396096 HMGXB4Q9UGU5 601 aa17.69■□□□□ 0.42
NUP50-202ENST00000396096 GLTPD2A6NH11 291 aa17.69■□□□□ 0.42
NUP50-202ENST00000396096 GOLGA8SH3BPF8 625 aa17.69■□□□□ 0.42
NUP50-202ENST00000396096 LRCH4O75427 683 aa17.69■□□□□ 0.42
NUP50-202ENST00000396096 ERBB2P04626 1255 aa17.69■□□□□ 0.42
NUP50-202ENST00000396096 ABHD2P08910 425 aa17.69■□□□□ 0.42
NUP50-202ENST00000396096 ATP5DP30049 168 aa17.69■□□□□ 0.42
NUP50-202ENST00000396096 IRX5P78411 483 aaPredicted RBP17.69■□□□□ 0.42
NUP50-202ENST00000396096 RBP5P82980 135 aa17.69■□□□□ 0.42
NUP50-202ENST00000396096 KYNUQ16719 465 aa17.69■□□□□ 0.42
NUP50-202ENST00000396096 HADHQ16836 314 aaKnown RBP17.69■□□□□ 0.42
NUP50-202ENST00000396096 P3H1Q32P28 736 aa17.69■□□□□ 0.42
NUP50-202ENST00000396096 DUSP28Q4G0W2 176 aa17.69■□□□□ 0.42
NUP50-202ENST00000396096 MARCH8Q5T0T0 291 aa17.69■□□□□ 0.42
NUP50-202ENST00000396096 C6orf89Q6UWU4 347 aa17.69■□□□□ 0.42
NUP50-202ENST00000396096 SLC35B2Q8TB61 432 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms