RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 STRIP2Q9ULQ0 834 aa14.52□□□□□ -0.09
VAPB-202ENST00000395802 ALPK3Q96L96 1907 aa14.52□□□□□ -0.09
VAPB-202ENST00000395802 MYH10P35580 1976 aa14.51□□□□□ -0.09
VAPB-202ENST00000395802 A0A0A6YYK5 440 aaPredicted RBP14.51□□□□□ -0.09
VAPB-202ENST00000395802 FANCGO15287 622 aa14.51□□□□□ -0.09
VAPB-202ENST00000395802 OAZ2O95190 189 aa14.51□□□□□ -0.09
VAPB-202ENST00000395802 CALB1P05937 261 aa14.51□□□□□ -0.09
VAPB-202ENST00000395802 SETSIPP0DME0 302 aa14.51□□□□□ -0.09
VAPB-202ENST00000395802 PTPN1P18031 435 aaKnown RBP14.51□□□□□ -0.09
VAPB-202ENST00000395802 LMO2P25791 158 aa14.51□□□□□ -0.09
VAPB-202ENST00000395802 ARHGAP25P42331 645 aa14.51□□□□□ -0.09
VAPB-202ENST00000395802 GALCP54803 685 aa14.51□□□□□ -0.09
VAPB-202ENST00000395802 GPC5P78333 572 aa14.51□□□□□ -0.09
VAPB-202ENST00000395802 LIN9Q5TKA1 542 aa14.51□□□□□ -0.09
VAPB-202ENST00000395802 FAM117BQ6P1L5 589 aa14.51□□□□□ -0.09
VAPB-202ENST00000395802 FUT10Q6P4F1 479 aa14.51□□□□□ -0.09
VAPB-202ENST00000395802 PHF13Q86YI8 300 aaPredicted RBP14.51□□□□□ -0.09
VAPB-202ENST00000395802 TFAP2BQ92481 460 aa14.51□□□□□ -0.09
VAPB-202ENST00000395802 SECISBP2LQ93073 1101 aaKnown RBP14.51□□□□□ -0.09
VAPB-202ENST00000395802 PCDHB18PQ96TA0 734 aa14.51□□□□□ -0.09
VAPB-202ENST00000395802 RAD9AQ99638 391 aa14.51□□□□□ -0.09
VAPB-202ENST00000395802 SYT15Q9BQS2 421 aa14.51□□□□□ -0.09
VAPB-202ENST00000395802 CWH43Q9H720 699 aa14.51□□□□□ -0.09
VAPB-202ENST00000395802 TSPAN16Q9UKR8 245 aa14.51□□□□□ -0.09
VAPB-202ENST00000395802 ZMYND8Q9ULU4 1186 aaPredicted RBP14.51□□□□□ -0.09
VAPB-202ENST00000395802 PCDHB12Q9Y5F1 795 aa14.51□□□□□ -0.09
VAPB-202ENST00000395802 H7C4K7 107 aa14.5□□□□□ -0.09
VAPB-202ENST00000395802 M0QYV0 167 aa14.5□□□□□ -0.09
VAPB-202ENST00000395802 ITGB1P05556 798 aa14.5□□□□□ -0.09
VAPB-202ENST00000395802 NAP1L1P55209 391 aaKnown RBP14.5□□□□□ -0.09
VAPB-202ENST00000395802 NOMO3P69849 1222 aa14.5□□□□□ -0.09
VAPB-202ENST00000395802 HTRA4P83105 476 aaPredicted RBP14.5□□□□□ -0.09
VAPB-202ENST00000395802 C1QBPQ07021 282 aaKnown RBP14.5□□□□□ -0.09
VAPB-202ENST00000395802 FAM171A1Q5VUB5 890 aa14.5□□□□□ -0.09
VAPB-202ENST00000395802 NAA35Q5VZE5 725 aa14.5□□□□□ -0.09
VAPB-202ENST00000395802 KCNT2Q6UVM3 1135 aa14.5□□□□□ -0.09
VAPB-202ENST00000395802 SYT10Q6XYQ8 523 aa14.5□□□□□ -0.09
VAPB-202ENST00000395802 DCP1BQ8IZD4 617 aaKnown RBP14.5□□□□□ -0.09
VAPB-202ENST00000395802 FIBCD1Q8N539 461 aa14.5□□□□□ -0.09
VAPB-202ENST00000395802 ANKRD52Q8NB46 1076 aa14.5□□□□□ -0.09
VAPB-202ENST00000395802 TMEM169Q96HH4 297 aa14.5□□□□□ -0.09
VAPB-202ENST00000395802 ALS2CR12Q96Q35 445 aa14.5□□□□□ -0.09
VAPB-202ENST00000395802 GUCA1BQ9UMX6 200 aa14.5□□□□□ -0.09
VAPB-202ENST00000395802 TIMM13Q9Y5L4 95 aaPredicted RBP14.5□□□□□ -0.09
VAPB-202ENST00000395802 B4GALT3O60512 393 aa14.5□□□□□ -0.09
VAPB-202ENST00000395802 MICAL2O94851 1124 aa14.5□□□□□ -0.09
VAPB-202ENST00000395802 ABL1P00519 1130 aa14.5□□□□□ -0.09
VAPB-202ENST00000395802 ATP2A2P16615 1042 aaKnown RBP14.5□□□□□ -0.09
VAPB-202ENST00000395802 BCAT1P54687 386 aa14.5□□□□□ -0.09
VAPB-202ENST00000395802 PLCB3Q01970 1234 aa14.5□□□□□ -0.09
VAPB-202ENST00000395802 SMARCB1Q12824 385 aa14.5□□□□□ -0.09
VAPB-202ENST00000395802 ORC1Q13415 861 aa14.5□□□□□ -0.09
VAPB-202ENST00000395802 USP41Q3LFD5 358 aa14.5□□□□□ -0.09
VAPB-202ENST00000395802 PPP1R26Q5T8A7 1209 aaPredicted RBP14.5□□□□□ -0.09
VAPB-202ENST00000395802 ZNF280DQ6N043 979 aa14.5□□□□□ -0.09
VAPB-202ENST00000395802 C4orf50Q6ZRC1 276 aa14.5□□□□□ -0.09
VAPB-202ENST00000395802 ANKS3Q6ZW76 656 aa14.5□□□□□ -0.09
VAPB-202ENST00000395802 ERICH1Q86X53 443 aa14.5□□□□□ -0.09
VAPB-202ENST00000395802 PALB2Q86YC2 1186 aa14.5□□□□□ -0.09
VAPB-202ENST00000395802 PASD1Q8IV76 773 aa14.5□□□□□ -0.09
VAPB-202ENST00000395802 TNS4Q8IZW8 715 aa14.5□□□□□ -0.09
VAPB-202ENST00000395802 C12orf29Q8N999 325 aa14.5□□□□□ -0.09
VAPB-202ENST00000395802 KIF18AQ8NI77 898 aa14.5□□□□□ -0.09
VAPB-202ENST00000395802 OLIG1Q8TAK6 271 aa14.5□□□□□ -0.09
VAPB-202ENST00000395802 MYCBPAPQ8TBZ2 947 aa14.5□□□□□ -0.09
VAPB-202ENST00000395802 UBE2Q2Q8WVN8 375 aa14.5□□□□□ -0.09
VAPB-202ENST00000395802 CPA5Q8WXQ8 436 aa14.5□□□□□ -0.09
VAPB-202ENST00000395802 ZNF592Q92610 1267 aa14.5□□□□□ -0.09
VAPB-202ENST00000395802 IGSF21Q96ID5 467 aa14.5□□□□□ -0.09
VAPB-202ENST00000395802 HNRNPABQ99729 332 aaKnown RBP14.5□□□□□ -0.09
VAPB-202ENST00000395802 SYNCQ9H7C4 482 aa14.5□□□□□ -0.09
VAPB-202ENST00000395802 MRPL47Q9HD33 250 aaKnown RBP14.5□□□□□ -0.09
VAPB-202ENST00000395802 MARCH5Q9NX47 278 aa14.5□□□□□ -0.09
VAPB-202ENST00000395802 ADAM22Q9P0K1 906 aa14.5□□□□□ -0.09
VAPB-202ENST00000395802 GTF3C4Q9UKN8 822 aa14.5□□□□□ -0.09
VAPB-202ENST00000395802 RWDD3Q9Y3V2 267 aa14.5□□□□□ -0.09
VAPB-202ENST00000395802 PAXBP1Q9Y5B6 917 aa14.5□□□□□ -0.09
VAPB-202ENST00000395802 OR6C75A6NL08 312 aa14.49□□□□□ -0.09
VAPB-202ENST00000395802 I3L4J1 428 aa14.49□□□□□ -0.09
VAPB-202ENST00000395802 ABCB4P21439 1286 aa14.49□□□□□ -0.09
VAPB-202ENST00000395802 FGFR3P22607 806 aa14.49□□□□□ -0.09
VAPB-202ENST00000395802 KRT17Q04695 432 aa14.49□□□□□ -0.09
VAPB-202ENST00000395802 BST2Q10589 180 aaKnown RBP14.49□□□□□ -0.09
VAPB-202ENST00000395802 INTS6LQ5JSJ4 861 aaKnown RBP14.49□□□□□ -0.09
VAPB-202ENST00000395802 OSTM1Q86WC4 334 aa14.49□□□□□ -0.09
VAPB-202ENST00000395802 CEP57Q86XR8 500 aa14.49□□□□□ -0.09
VAPB-202ENST00000395802 HERC6Q8IVU3 1022 aa14.49□□□□□ -0.09
VAPB-202ENST00000395802 TRIM58Q8NG06 486 aa14.49□□□□□ -0.09
VAPB-202ENST00000395802 IPO4Q8TEX9 1081 aaKnown RBP14.49□□□□□ -0.09
VAPB-202ENST00000395802 STK32AQ8WU08 396 aa14.49□□□□□ -0.09
VAPB-202ENST00000395802 RFFLQ8WZ73 363 aa14.49□□□□□ -0.09
VAPB-202ENST00000395802 TTPALQ9BTX7 342 aa14.49□□□□□ -0.09
VAPB-202ENST00000395802 IRX2Q9BZI1 471 aaPredicted RBP14.49□□□□□ -0.09
VAPB-202ENST00000395802 LACRTQ9GZZ8 138 aa14.49□□□□□ -0.09
VAPB-202ENST00000395802 DPEP3Q9H4B8 488 aa14.49□□□□□ -0.09
VAPB-202ENST00000395802 CYLDQ9NQC7 956 aa14.49□□□□□ -0.09
VAPB-202ENST00000395802 FAM49BQ9NUQ9 324 aa14.49□□□□□ -0.09
VAPB-202ENST00000395802 TAS2R14Q9NYV8 317 aa14.49□□□□□ -0.09
VAPB-202ENST00000395802 SPG21Q9NZD8 308 aa14.49□□□□□ -0.09
VAPB-202ENST00000395802 WDR35Q9P2L0 1181 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms