RNA–Protein interactions for RNA: ENST00000395194.1

COL11A2-204, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 1 (best) BASIC

Gene COL11A2, Length 1,194 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-204ENST00000395194 KRT19P08727 400 aa20.73■□□□□ 0.91
COL11A2-204ENST00000395194 MLLT6P55198 1093 aaPredicted RBP20.73■□□□□ 0.91
COL11A2-204ENST00000395194 SPEM2Q0P670 501 aa20.73■□□□□ 0.91
COL11A2-204ENST00000395194 LMBRD2Q68DH5 695 aaPredicted RBP20.73■□□□□ 0.91
COL11A2-204ENST00000395194 MAMSTRQ6ZN01 415 aa20.73■□□□□ 0.91
COL11A2-204ENST00000395194 TMEM150AQ86TG1 271 aa20.73■□□□□ 0.91
COL11A2-204ENST00000395194 RALGPS2Q86X27 583 aaPredicted RBP20.73■□□□□ 0.91
COL11A2-204ENST00000395194 CMTM8Q8IZV2 173 aa20.73■□□□□ 0.91
COL11A2-204ENST00000395194 PDILTQ8N807 584 aa20.73■□□□□ 0.91
COL11A2-204ENST00000395194 USP28Q96RU2 1077 aa20.73■□□□□ 0.91
COL11A2-204ENST00000395194 HCRTO43612 131 aa20.72■□□□□ 0.91
COL11A2-204ENST00000395194 HMGA1P17096 107 aaKnown RBP20.72■□□□□ 0.91
COL11A2-204ENST00000395194 PNPLA4P41247 253 aa20.72■□□□□ 0.91
COL11A2-204ENST00000395194 NLRP12P59046 1061 aa20.72■□□□□ 0.91
COL11A2-204ENST00000395194 POU5F1Q01860 360 aaKnown RBP20.72■□□□□ 0.91
COL11A2-204ENST00000395194 TRIM68Q6AZZ1 485 aa20.72■□□□□ 0.91
COL11A2-204ENST00000395194 C1orf228Q6PIY5 440 aa20.72■□□□□ 0.91
COL11A2-204ENST00000395194 CCDC73Q6ZRK6 1079 aa20.72■□□□□ 0.91
COL11A2-204ENST00000395194 OSTM1Q86WC4 334 aa20.72■□□□□ 0.91
COL11A2-204ENST00000395194 NT5DC4Q86YG4 428 aa20.72■□□□□ 0.91
COL11A2-204ENST00000395194 CSGALNACT2Q8N6G5 542 aa20.72■□□□□ 0.91
COL11A2-204ENST00000395194 CELF5Q8N6W0 485 aaKnown RBP20.72■□□□□ 0.91
COL11A2-204ENST00000395194 TTC16Q8NEE8 873 aa20.72■□□□□ 0.91
COL11A2-204ENST00000395194 PDE11AQ9HCR9 933 aa20.72■□□□□ 0.91
COL11A2-204ENST00000395194 PANK4Q9NVE7 773 aa20.72■□□□□ 0.91
COL11A2-204ENST00000395194 DDX43Q9NXZ2 648 aaKnown RBP20.72■□□□□ 0.91
COL11A2-204ENST00000395194 PCDHB13Q9Y5F0 798 aa20.72■□□□□ 0.91
COL11A2-204ENST00000395194 TPRP12270 2363 aaKnown RBP20.72■□□□□ 0.91
COL11A2-204ENST00000395194 GREB1Q4ZG55 1949 aa20.71■□□□□ 0.91
COL11A2-204ENST00000395194 HUS1O60921 280 aa20.71■□□□□ 0.91
COL11A2-204ENST00000395194 TGM1P22735 817 aa20.71■□□□□ 0.91
COL11A2-204ENST00000395194 AVPR1AP37288 418 aa20.71■□□□□ 0.91
COL11A2-204ENST00000395194 PLCB2Q00722 1185 aa20.71■□□□□ 0.91
COL11A2-204ENST00000395194 SMARCB1Q12824 385 aa20.71■□□□□ 0.91
COL11A2-204ENST00000395194 SIM2Q14190 667 aaPredicted RBP20.71■□□□□ 0.91
COL11A2-204ENST00000395194 DDR2Q16832 855 aa20.71■□□□□ 0.91
COL11A2-204ENST00000395194 ITPRIPL2Q3MIP1 535 aa20.71■□□□□ 0.91
COL11A2-204ENST00000395194 DGKKQ5KSL6 1271 aa20.71■□□□□ 0.91
COL11A2-204ENST00000395194 TXNDC8Q6A555 127 aa20.71■□□□□ 0.91
COL11A2-204ENST00000395194 GPR161Q8N6U8 529 aaKnown RBP20.71■□□□□ 0.91
COL11A2-204ENST00000395194 MTMR12Q9C0I1 747 aa20.71■□□□□ 0.91
COL11A2-204ENST00000395194 OLFML3Q9NRN5 406 aa20.71■□□□□ 0.91
COL11A2-204ENST00000395194 GKN1Q9NS71 199 aa20.71■□□□□ 0.91
COL11A2-204ENST00000395194 THG1LQ9NWX6 298 aaKnown RBP20.71■□□□□ 0.91
COL11A2-204ENST00000395194 SNX9Q9Y5X1 595 aa20.71■□□□□ 0.91
COL11A2-204ENST00000395194 K7ESF4 209 aa20.7■□□□□ 0.9
COL11A2-204ENST00000395194 HRO43593 1189 aa20.7■□□□□ 0.9
COL11A2-204ENST00000395194 LDHAP00338 332 aaKnown RBP20.7■□□□□ 0.9
COL11A2-204ENST00000395194 F11P03951 625 aa20.7■□□□□ 0.9
COL11A2-204ENST00000395194 GARTP22102 1010 aa20.7■□□□□ 0.9
COL11A2-204ENST00000395194 CYP2F1P24903 491 aa20.7■□□□□ 0.9
COL11A2-204ENST00000395194 CCINQ13939 588 aa20.7■□□□□ 0.9
COL11A2-204ENST00000395194 LAIR1Q6GTX8 287 aa20.7■□□□□ 0.9
COL11A2-204ENST00000395194 GLIS3Q8NEA6 775 aa20.7■□□□□ 0.9
COL11A2-204ENST00000395194 RIN3Q8TB24 985 aa20.7■□□□□ 0.9
COL11A2-204ENST00000395194 CACTINQ8WUQ7 758 aaKnown RBP20.7■□□□□ 0.9
COL11A2-204ENST00000395194 USP13Q92995 863 aaPredicted RBP20.7■□□□□ 0.9
COL11A2-204ENST00000395194 HPS3Q969F9 1004 aa20.7■□□□□ 0.9
COL11A2-204ENST00000395194 EBF3Q9H4W6 596 aa20.7■□□□□ 0.9
COL11A2-204ENST00000395194 HPS4Q9NQG7 708 aa20.7■□□□□ 0.9
COL11A2-204ENST00000395194 CDV3Q9UKY7 258 aaKnown RBP20.7■□□□□ 0.9
COL11A2-204ENST00000395194 MTMR6Q9Y217 621 aa20.7■□□□□ 0.9
COL11A2-204ENST00000395194 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.7■□□□□ 0.9
COL11A2-204ENST00000395194 EML5Q05BV3 1969 aa20.7■□□□□ 0.9
COL11A2-204ENST00000395194 MYO16Q9Y6X6 1858 aa20.69■□□□□ 0.9
COL11A2-204ENST00000395194 FRMD3A2A2Y4 597 aa20.69■□□□□ 0.9
COL11A2-204ENST00000395194 EXTL3O43909 919 aa20.69■□□□□ 0.9
COL11A2-204ENST00000395194 TMEM191BP0C7N4 346 aa20.69■□□□□ 0.9
COL11A2-204ENST00000395194 WEE1P30291 646 aa20.69■□□□□ 0.9
COL11A2-204ENST00000395194 ATXN1P54253 815 aaKnown RBP20.69■□□□□ 0.9
COL11A2-204ENST00000395194 MYL7Q01449 175 aa20.69■□□□□ 0.9
COL11A2-204ENST00000395194 LMNB2Q03252 620 aa20.69■□□□□ 0.9
COL11A2-204ENST00000395194 NFE2Q16621 373 aaPredicted RBP20.69■□□□□ 0.9
COL11A2-204ENST00000395194 INTS6LQ5JSJ4 861 aaKnown RBP20.69■□□□□ 0.9
COL11A2-204ENST00000395194 PKN3Q6P5Z2 889 aa20.69■□□□□ 0.9
COL11A2-204ENST00000395194 MRPS31Q92665 395 aaKnown RBP20.69■□□□□ 0.9
COL11A2-204ENST00000395194 SIX4Q9UIU6 781 aa20.69■□□□□ 0.9
COL11A2-204ENST00000395194 GTF3C4Q9UKN8 822 aa20.69■□□□□ 0.9
COL11A2-204ENST00000395194 PTPRDP23468 1912 aa20.68■□□□□ 0.9
COL11A2-204ENST00000395194 HELZP42694 1942 aaKnown RBP20.68■□□□□ 0.9
COL11A2-204ENST00000395194 OTOL1A6NHN0 477 aaPredicted RBP20.68■□□□□ 0.9
COL11A2-204ENST00000395194 TADA3O75528 432 aa20.68■□□□□ 0.9
COL11A2-204ENST00000395194 CSH1P0DML2 217 aa20.68■□□□□ 0.9
COL11A2-204ENST00000395194 CSH2P0DML3 217 aa20.68■□□□□ 0.9
COL11A2-204ENST00000395194 ARSAP15289 507 aa20.68■□□□□ 0.9
COL11A2-204ENST00000395194 ALCAMQ13740 583 aa20.68■□□□□ 0.9
COL11A2-204ENST00000395194 SLC39A14Q15043 492 aa20.68■□□□□ 0.9
COL11A2-204ENST00000395194 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.68■□□□□ 0.9
COL11A2-204ENST00000395194 ADGRF2Q8IZF7 708 aa20.68■□□□□ 0.9
COL11A2-204ENST00000395194 GPD1LQ8N335 351 aa20.68■□□□□ 0.9
COL11A2-204ENST00000395194 LRRC52Q8N7C0 313 aa20.68■□□□□ 0.9
COL11A2-204ENST00000395194 CXorf38Q8TB03 319 aa20.68■□□□□ 0.9
COL11A2-204ENST00000395194 ACBD6Q9BR61 282 aa20.68■□□□□ 0.9
COL11A2-204ENST00000395194 TRPC7Q9HCX4 862 aa20.68■□□□□ 0.9
COL11A2-204ENST00000395194 ITGA11Q9UKX5 1188 aa20.68■□□□□ 0.9
COL11A2-204ENST00000395194 PTPRJQ12913 1337 aa20.68■□□□□ 0.9
COL11A2-204ENST00000395194 DCDC2BA2VCK2 349 aa20.67■□□□□ 0.9
COL11A2-204ENST00000395194 PXNP49023 591 aaPredicted RBP20.67■□□□□ 0.9
COL11A2-204ENST00000395194 RUNX3Q13761 415 aa20.67■□□□□ 0.9
COL11A2-204ENST00000395194 STK38Q15208 465 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms