RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 KIRREL3Q8IZU9 778 aa10.82□□□□□ -0.68
COL4A6-203ENST00000394872 C4orf33Q8N1A6 199 aa10.82□□□□□ -0.68
COL4A6-203ENST00000394872 FAM71DQ8N9W8 422 aa10.82□□□□□ -0.68
COL4A6-203ENST00000394872 CATSPER1Q8NEC5 780 aa10.82□□□□□ -0.68
COL4A6-203ENST00000394872 C9orf72Q96LT7 481 aa10.82□□□□□ -0.68
COL4A6-203ENST00000394872 MKNK1Q9BUB5 465 aa10.82□□□□□ -0.68
COL4A6-203ENST00000394872 STN1Q9H668 368 aaKnown RBP10.82□□□□□ -0.68
COL4A6-203ENST00000394872 C17orf75Q9HAS0 396 aa10.82□□□□□ -0.68
COL4A6-203ENST00000394872 GBA2Q9HCG7 927 aaPredicted RBP10.82□□□□□ -0.68
COL4A6-203ENST00000394872 CPA4Q9UI42 421 aa10.82□□□□□ -0.68
COL4A6-203ENST00000394872 ATP11BQ9Y2G3 1177 aa10.82□□□□□ -0.68
COL4A6-203ENST00000394872 UNC13BO14795 1591 aa10.82□□□□□ -0.68
COL4A6-203ENST00000394872 LZTS3O60299 673 aaPredicted RBP10.82□□□□□ -0.68
COL4A6-203ENST00000394872 SRP72O76094 671 aaKnown RBP10.82□□□□□ -0.68
COL4A6-203ENST00000394872 MAGEA9P43362 315 aa10.82□□□□□ -0.68
COL4A6-203ENST00000394872 BACE1P56817 501 aa10.82□□□□□ -0.68
COL4A6-203ENST00000394872 UGT3A1Q6NUS8 523 aa10.82□□□□□ -0.68
COL4A6-203ENST00000394872 PCSK9Q8NBP7 692 aaKnown RBP10.82□□□□□ -0.68
COL4A6-203ENST00000394872 ACER1Q8TDN7 264 aa10.82□□□□□ -0.68
COL4A6-203ENST00000394872 ACSF2Q96CM8 615 aaPredicted RBP10.82□□□□□ -0.68
COL4A6-203ENST00000394872 CAPN10Q9HC96 672 aa10.82□□□□□ -0.68
COL4A6-203ENST00000394872 SCUBE2Q9NQ36 999 aa10.82□□□□□ -0.68
COL4A6-203ENST00000394872 MARCOQ9UEW3 520 aaPredicted RBP10.82□□□□□ -0.68
COL4A6-203ENST00000394872 PXDNLA1KZ92 1463 aa10.82□□□□□ -0.68
COL4A6-203ENST00000394872 MAN1A2O60476 641 aa10.82□□□□□ -0.68
COL4A6-203ENST00000394872 MUTP22033 750 aa10.82□□□□□ -0.68
COL4A6-203ENST00000394872 CENPAP49450 140 aa10.82□□□□□ -0.68
COL4A6-203ENST00000394872 CLCN3P51790 818 aa10.82□□□□□ -0.68
COL4A6-203ENST00000394872 LINC00523Q86TU6 105 aa10.82□□□□□ -0.68
COL4A6-203ENST00000394872 HES6Q96HZ4 224 aa10.82□□□□□ -0.68
COL4A6-203ENST00000394872 ZFP42Q96MM3 310 aa10.82□□□□□ -0.68
COL4A6-203ENST00000394872 STX7O15400 261 aaKnown RBP10.82□□□□□ -0.68
COL4A6-203ENST00000394872 GUCY1A3Q02108 690 aa10.82□□□□□ -0.68
COL4A6-203ENST00000394872 DTNAQ9Y4J8 743 aa10.82□□□□□ -0.68
COL4A6-203ENST00000394872 AK9Q5TCS8 1911 aa10.82□□□□□ -0.68
COL4A6-203ENST00000394872 PMPCBO75439 489 aa10.82□□□□□ -0.68
COL4A6-203ENST00000394872 KRT16P08779 473 aa10.82□□□□□ -0.68
COL4A6-203ENST00000394872 CYP11B2P19099 503 aa10.82□□□□□ -0.68
COL4A6-203ENST00000394872 SOX11P35716 441 aa10.82□□□□□ -0.68
COL4A6-203ENST00000394872 SERPINB4P48594 390 aa10.82□□□□□ -0.68
COL4A6-203ENST00000394872 E2F4Q16254 413 aa10.82□□□□□ -0.68
COL4A6-203ENST00000394872 NBPF20Q3BBV1 942 aa10.82□□□□□ -0.68
COL4A6-203ENST00000394872 RABGAP1LQ5R372 815 aa10.82□□□□□ -0.68
COL4A6-203ENST00000394872 C4orf22Q6V702 233 aa10.82□□□□□ -0.68
COL4A6-203ENST00000394872 COL23A1Q86Y22 540 aaPredicted RBP10.82□□□□□ -0.68
COL4A6-203ENST00000394872 OPTNQ96CV9 577 aa10.82□□□□□ -0.68
COL4A6-203ENST00000394872 WDR24Q96S15 920 aa10.82□□□□□ -0.68
COL4A6-203ENST00000394872 RUSC1Q9BVN2 902 aa10.82□□□□□ -0.68
COL4A6-203ENST00000394872 STARD7Q9NQZ5 370 aa10.82□□□□□ -0.68
COL4A6-203ENST00000394872 PKD2L2Q9NZM6 624 aa10.82□□□□□ -0.68
COL4A6-203ENST00000394872 POLLQ9UGP5 575 aa10.82□□□□□ -0.68
COL4A6-203ENST00000394872 C2orf81A6NN90 581 aa10.81□□□□□ -0.68
COL4A6-203ENST00000394872 ANXA9O76027 345 aa10.81□□□□□ -0.68
COL4A6-203ENST00000394872 SUPT20HL2P0C7V6 817 aa10.81□□□□□ -0.68
COL4A6-203ENST00000394872 CYP2C8P10632 490 aa10.81□□□□□ -0.68
COL4A6-203ENST00000394872 ACO1P21399 889 aaKnown RBP10.81□□□□□ -0.68
COL4A6-203ENST00000394872 CTXN3Q4LDR2 81 aa10.81□□□□□ -0.68
COL4A6-203ENST00000394872 KLHDC7AQ5VTJ3 777 aa10.81□□□□□ -0.68
COL4A6-203ENST00000394872 ADGRF2Q8IZF7 708 aa10.81□□□□□ -0.68
COL4A6-203ENST00000394872 CNPY4Q8N129 248 aa10.81□□□□□ -0.68
COL4A6-203ENST00000394872 BLOC1S5Q8TDH9 187 aa10.81□□□□□ -0.68
COL4A6-203ENST00000394872 USP13Q92995 863 aaPredicted RBP10.81□□□□□ -0.68
COL4A6-203ENST00000394872 PHF21AQ96BD5 680 aa10.81□□□□□ -0.68
COL4A6-203ENST00000394872 DNAJC7Q99615 494 aa10.81□□□□□ -0.68
COL4A6-203ENST00000394872 TRIM10Q9UDY6 481 aa10.81□□□□□ -0.68
COL4A6-203ENST00000394872 SLC37A4O43826 429 aa10.81□□□□□ -0.68
COL4A6-203ENST00000394872 RNASEH1O60930 286 aaKnown RBP10.81□□□□□ -0.68
COL4A6-203ENST00000394872 TMEM253P0C7T8 217 aa10.81□□□□□ -0.68
COL4A6-203ENST00000394872 RAP1GDS1P52306 607 aa10.81□□□□□ -0.68
COL4A6-203ENST00000394872 MPZL3Q6UWV2 235 aa10.81□□□□□ -0.68
COL4A6-203ENST00000394872 HASPINQ8TF76 798 aa10.81□□□□□ -0.68
COL4A6-203ENST00000394872 MTMR12Q9C0I1 747 aa10.81□□□□□ -0.68
COL4A6-203ENST00000394872 CHST12Q9NRB3 414 aa10.81□□□□□ -0.68
COL4A6-203ENST00000394872 WWOXQ9NZC7 414 aa10.81□□□□□ -0.68
COL4A6-203ENST00000394872 H2AFY2Q9P0M6 372 aaPredicted RBP10.81□□□□□ -0.68
COL4A6-203ENST00000394872 SPASTQ9UBP0 616 aa10.81□□□□□ -0.68
COL4A6-203ENST00000394872 CHN1P15882 459 aa10.81□□□□□ -0.68
COL4A6-203ENST00000394872 CARSP49589 748 aaKnown RBP10.81□□□□□ -0.68
COL4A6-203ENST00000394872 POU4F1Q01851 419 aa10.81□□□□□ -0.68
COL4A6-203ENST00000394872 TP53BP2Q13625 1128 aa10.81□□□□□ -0.68
COL4A6-203ENST00000394872 DEFB132Q7Z7B7 95 aa10.81□□□□□ -0.68
COL4A6-203ENST00000394872 ACOT1Q86TX2 421 aa10.81□□□□□ -0.68
COL4A6-203ENST00000394872 MIB1Q86YT6 1006 aa10.81□□□□□ -0.68
COL4A6-203ENST00000394872 AGPAT3Q9NRZ7 376 aa10.81□□□□□ -0.68
COL4A6-203ENST00000394872 GGT7Q9UJ14 662 aa10.81□□□□□ -0.68
COL4A6-203ENST00000394872 IPPQ9Y573 584 aa10.81□□□□□ -0.68
COL4A6-203ENST00000394872 PNPLA6Q8IY17 1366 aa10.81□□□□□ -0.68
COL4A6-203ENST00000394872 AKAP10O43572 662 aa10.81□□□□□ -0.68
COL4A6-203ENST00000394872 SPAG6O75602 509 aa10.81□□□□□ -0.68
COL4A6-203ENST00000394872 NAMPTP43490 491 aa10.81□□□□□ -0.68
COL4A6-203ENST00000394872 CENPCQ03188 943 aa10.81□□□□□ -0.68
COL4A6-203ENST00000394872 NR1I3Q14994 352 aa10.81□□□□□ -0.68
COL4A6-203ENST00000394872 ACAD10Q6JQN1 1059 aa10.81□□□□□ -0.68
COL4A6-203ENST00000394872 C16orf89Q6UX73 402 aa10.81□□□□□ -0.68
COL4A6-203ENST00000394872 CD302Q8IX05 232 aa10.81□□□□□ -0.68
COL4A6-203ENST00000394872 PARP9Q8IXQ6 854 aa10.81□□□□□ -0.68
COL4A6-203ENST00000394872 ZNF669Q96BR6 464 aaPredicted RBP10.81□□□□□ -0.68
COL4A6-203ENST00000394872 PLEKHA8Q96JA3 519 aa10.81□□□□□ -0.68
COL4A6-203ENST00000394872 TRMT6Q9UJA5 497 aaKnown RBP10.81□□□□□ -0.68
COL4A6-203ENST00000394872 MADDQ8WXG6 1647 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms